Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11h22
(311 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX538033-1|CAD97978.1| 822|Homo sapiens hypothetical protein pr... 31 0.95
AL138759-1|CAD13191.1| 838|Homo sapiens helicase, lymphoid-spec... 31 0.95
AF155827-1|AAF82262.1| 838|Homo sapiens proliferation-associate... 31 0.95
AB113249-1|BAD24805.1| 782|Homo sapiens lymphoid specific helic... 31 0.95
AB113248-1|BAD24804.1| 809|Homo sapiens lymphoid specific helic... 31 0.95
AB102723-1|BAD10851.1| 884|Homo sapiens lymphoid specific helic... 31 0.95
BC034937-1|AAH34937.1| 654|Homo sapiens C10orf64 protein protein. 28 6.7
AK127650-1|BAC87073.1| 1042|Homo sapiens protein ( Homo sapiens ... 28 6.7
DQ139309-1|AAZ73614.1| 1104|Homo sapiens transient receptor pote... 27 8.8
BC126342-1|AAI26343.1| 682|Homo sapiens TRPM8 protein protein. 27 8.8
AY328400-1|AAP92167.1| 1104|Homo sapiens transient receptor pote... 27 8.8
AY090109-1|AAM10446.1| 1104|Homo sapiens transient receptor pote... 27 8.8
AB061779-1|BAB86335.1| 1095|Homo sapiens LTRPC6 protein. 27 8.8
>BX538033-1|CAD97978.1| 822|Homo sapiens hypothetical protein
protein.
Length = 822
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 5 MYFYVSNIKKKKLFRNLINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQWKF 166
M ++ + +++KL RN +Y + ++H V+I+ F M+ N H WK+
Sbjct: 284 MLYHGTQEERQKLVRN---IYKRKGTLQIHPVVITSFEIAMRDRNALQHCYWKY 334
>AL138759-1|CAD13191.1| 838|Homo sapiens helicase,
lymphoid-specific protein.
Length = 838
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 5 MYFYVSNIKKKKLFRNLINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQWKF 166
M ++ + +++KL RN +Y + ++H V+I+ F M+ N H WK+
Sbjct: 300 MLYHGTQEERQKLVRN---IYKRKGTLQIHPVVITSFEIAMRDRNALQHCYWKY 350
>AF155827-1|AAF82262.1| 838|Homo sapiens proliferation-associated
SNF2-like protein protein.
Length = 838
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 5 MYFYVSNIKKKKLFRNLINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQWKF 166
M ++ + +++KL RN +Y + ++H V+I+ F M+ N H WK+
Sbjct: 300 MLYHGTQEERQKLVRN---IYKRKGTLQIHPVVITSFEIAMRDRNALQHCYWKY 350
>AB113249-1|BAD24805.1| 782|Homo sapiens lymphoid specific helicase
variant10 protein.
Length = 782
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 5 MYFYVSNIKKKKLFRNLINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQWKF 166
M ++ + +++KL RN +Y + ++H V+I+ F M+ N H WK+
Sbjct: 300 MLYHGTQEERQKLVRN---IYKRKGTLQIHPVVITSFEIAMRDRNALQHCYWKY 350
>AB113248-1|BAD24804.1| 809|Homo sapiens lymphoid specific helicase
variant9 protein.
Length = 809
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 5 MYFYVSNIKKKKLFRNLINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQWKF 166
M ++ + +++KL RN +Y + ++H V+I+ F M+ N H WK+
Sbjct: 300 MLYHGTQEERQKLVRN---IYKRKGTLQIHPVVITSFEIAMRDRNALQHCYWKY 350
>AB102723-1|BAD10851.1| 884|Homo sapiens lymphoid specific helicase
variant8 protein.
Length = 884
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 5 MYFYVSNIKKKKLFRNLINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQWKF 166
M ++ + +++KL RN +Y + ++H V+I+ F M+ N H WK+
Sbjct: 300 MLYHGTQEERQKLVRN---IYKRKGTLQIHPVVITSFEIAMRDRNALQHCYWKY 350
>BC034937-1|AAH34937.1| 654|Homo sapiens C10orf64 protein protein.
Length = 654
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 26 IKKKKLFRNLINVYHKSTNSKLHSVLISIFTDFMQKNNKNYH-NQWKFQ 169
+K + F+ L NV+HK+++S L ++S+ N +N+ +W Q
Sbjct: 380 VKNLQAFQVLQNVFHKASDSVLCIQVLSVIRTMWAWNARNFFLLEWTLQ 428
>AK127650-1|BAC87073.1| 1042|Homo sapiens protein ( Homo sapiens
cDNA FLJ45748 fis, clone LYMPB1000158. ).
Length = 1042
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 26 IKKKKLFRNLINVYHKSTNSKLHSVLISIFTDFMQKNNKNYH-NQWKFQ 169
+K + F+ L NV+HK+++S L ++S+ N +N+ +W Q
Sbjct: 380 VKNLQAFQVLQNVFHKASDSVLCIQVLSVIRTMWAWNARNFFLLEWTLQ 428
>DQ139309-1|AAZ73614.1| 1104|Homo sapiens transient receptor potential
subfamily M member 8 protein.
Length = 1104
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 53 LINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQWKFQT*YYYFLL 193
L+ +Y STN L ++L+++F + +N WKFQ YFL+
Sbjct: 959 LVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQR---YFLV 1002
>BC126342-1|AAI26343.1| 682|Homo sapiens TRPM8 protein protein.
Length = 682
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 53 LINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQWKFQT*YYYFLL 193
L+ +Y STN L ++L+++F + +N WKFQ YFL+
Sbjct: 537 LVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQR---YFLV 580
>AY328400-1|AAP92167.1| 1104|Homo sapiens transient receptor potential
subfamily M member 8 variant protein.
Length = 1104
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 53 LINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQWKFQT*YYYFLL 193
L+ +Y STN L ++L+++F + +N WKFQ YFL+
Sbjct: 959 LVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQR---YFLV 1002
>AY090109-1|AAM10446.1| 1104|Homo sapiens transient receptor potential
cation channel protein protein.
Length = 1104
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 53 LINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQWKFQT*YYYFLL 193
L+ +Y STN L ++L+++F + +N WKFQ YFL+
Sbjct: 959 LVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQR---YFLV 1002
>AB061779-1|BAB86335.1| 1095|Homo sapiens LTRPC6 protein.
Length = 1095
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 53 LINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQWKFQT*YYYFLL 193
L+ +Y STN L ++L+++F + +N WKFQ YFL+
Sbjct: 950 LVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQR---YFLV 993
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,926,791
Number of Sequences: 237096
Number of extensions: 297798
Number of successful extensions: 544
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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