Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11h22
         (311 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003534-1|AAO39538.1| 1174|Drosophila melanogaster RE09558p pro...    27   6.5  
AY094786-1|AAM11139.1|  777|Drosophila melanogaster LD14031p pro...    27   6.5  
AE014135-139|AAF59315.2| 1483|Drosophila melanogaster CG1793-PB,...    27   6.5  
AE014135-138|AAF59314.2| 1483|Drosophila melanogaster CG1793-PA,...    27   6.5  

>BT003534-1|AAO39538.1| 1174|Drosophila melanogaster RE09558p
           protein.
          Length = 1174

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 14  YVSN-IKKKKLFRNLINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQW 160
           Y+ N  KKKK +R  I      T S LH  L SI ++   KN  +Y N++
Sbjct: 736 YLENDSKKKKHYRKRIKTAVNRTFSNLHRNLYSIDSENGMKN--DYKNEY 783


>AY094786-1|AAM11139.1|  777|Drosophila melanogaster LD14031p
           protein.
          Length = 777

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 14  YVSN-IKKKKLFRNLINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQW 160
           Y+ N  KKKK +R  I      T S LH  L SI ++   KN  +Y N++
Sbjct: 339 YLENDSKKKKHYRKRIKTAVNRTFSNLHRNLYSIDSENGMKN--DYKNEY 386


>AE014135-139|AAF59315.2| 1483|Drosophila melanogaster CG1793-PB,
            isoform B protein.
          Length = 1483

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 14   YVSN-IKKKKLFRNLINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQW 160
            Y+ N  KKKK +R  I      T S LH  L SI ++   KN  +Y N++
Sbjct: 1045 YLENDSKKKKHYRKRIKTAVNRTFSNLHRNLYSIDSENGMKN--DYKNEY 1092


>AE014135-138|AAF59314.2| 1483|Drosophila melanogaster CG1793-PA,
            isoform A protein.
          Length = 1483

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 14   YVSN-IKKKKLFRNLINVYHKSTNSKLHSVLISIFTDFMQKNNKNYHNQW 160
            Y+ N  KKKK +R  I      T S LH  L SI ++   KN  +Y N++
Sbjct: 1045 YLENDSKKKKHYRKRIKTAVNRTFSNLHRNLYSIDSENGMKN--DYKNEY 1092


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,302,779
Number of Sequences: 53049
Number of extensions: 102555
Number of successful extensions: 242
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 610819518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)