Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11h09
         (621 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83104-4|CAB05478.2|  582|Caenorhabditis elegans Hypothetical pr...    59   3e-09
AC025723-2|AAK29943.1|  581|Caenorhabditis elegans Hypothetical ...    55   4e-08
AL032626-2|CAA21539.1|  571|Caenorhabditis elegans Hypothetical ...    51   6e-07
Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr...    24   7.8  

>Z83104-4|CAB05478.2|  582|Caenorhabditis elegans Hypothetical
           protein F09B12.3 protein.
          Length = 582

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 25/58 (43%), Positives = 37/58 (63%)
 Frame = +2

Query: 245 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVLKGY 418
           VA A + N +N TGW FLE+ T  +   + QAYSAG+LEG L++ ++  H +N  + Y
Sbjct: 81  VAVARWQNAVNTTGWTFLEVETKENYCPQLQAYSAGYLEGLLSKTVLTYHLKNAQEDY 138


>AC025723-2|AAK29943.1|  581|Caenorhabditis elegans Hypothetical
           protein Y54F10AM.8 protein.
          Length = 581

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 24/56 (42%), Positives = 35/56 (62%)
 Frame = +2

Query: 245 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVLK 412
           VA   Y+N++N TGW  LE+ T    + + QAY AG  EG LTR  I+ H++N ++
Sbjct: 72  VALGKYSNQVNTTGWGILEIETFASHSYDVQAYGAGVAEGELTRLQIYYHYRNTIE 127


>AL032626-2|CAA21539.1|  571|Caenorhabditis elegans Hypothetical
           protein Y37D8A.2 protein.
          Length = 571

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = +2

Query: 245 VAKATYTNEINNTGWAFLELHT-SRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVLKGY 418
           +A A + +E+N TGWAFLE+   S       Q Y+AGF EG  TR LI +H  N + GY
Sbjct: 52  LATAYFHDEVNQTGWAFLEVDVISPKIPHYLQGYAAGFAEGRATRHLIDLHIINTVNGY 110


>Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical
           protein Y70C5C.1 protein.
          Length = 985

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 236 DVYVAKATYTNEINNTGWAFLELHTS 313
           +V    + ++N +NN  W FL++H S
Sbjct: 144 EVCAVDSEHSNNLNNDAWRFLQVHRS 169


>Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical
           protein Y70C5C.1 protein.
          Length = 985

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 236 DVYVAKATYTNEINNTGWAFLELHTS 313
           +V    + ++N +NN  W FL++H S
Sbjct: 144 EVCAVDSEHSNNLNNDAWRFLQVHRS 169


>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
            F55H12.3 protein.
          Length = 2972

 Score = 24.2 bits (50), Expect(2) = 7.8
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 149  YACKCEYGFVLWSENKPTV-TVTDYYADIPDVY 244
            + C C  G+ L++ N P + T    Y D+ D Y
Sbjct: 933  FECHCPVGYHLYNANSPDLSTWARIYDDLIDGY 965



 Score = 21.4 bits (43), Expect(2) = 7.8
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +2

Query: 146 FYACKCEYGF 175
           FY+C+C+ G+
Sbjct: 886 FYSCQCDVGY 895


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,491,671
Number of Sequences: 27780
Number of extensions: 240830
Number of successful extensions: 548
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)