Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11h01
         (116 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X53777-1|CAA37793.1|  184|Homo sapiens protein ( Human L23 mRNA ...    46   3e-05
BC106031-1|AAI06032.1|  184|Homo sapiens ribosomal protein L17 p...    46   3e-05
BC066324-1|AAH66324.1|  184|Homo sapiens ribosomal protein L17 p...    46   3e-05
BC066323-1|AAH66323.1|  184|Homo sapiens ribosomal protein L17 p...    46   3e-05
BC017831-1|AAH17831.1|  184|Homo sapiens ribosomal protein L17 p...    46   3e-05
BC000502-1|AAH00502.1|  184|Homo sapiens ribosomal protein L17 p...    46   3e-05
AB061824-1|BAB79462.1|  184|Homo sapiens ribosomal protein L17 p...    46   3e-05

>X53777-1|CAA37793.1|  184|Homo sapiens protein ( Human L23 mRNA for
           putative ribosomal protein. ).
          Length = 184

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +2

Query: 38  MGRYSRXPDNPAKSCXARGSNLRVHF 115
           M RYS  P+NP KSC +RGSNLRVHF
Sbjct: 1   MVRYSLDPENPTKSCKSRGSNLRVHF 26


>BC106031-1|AAI06032.1|  184|Homo sapiens ribosomal protein L17
           protein.
          Length = 184

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +2

Query: 38  MGRYSRXPDNPAKSCXARGSNLRVHF 115
           M RYS  P+NP KSC +RGSNLRVHF
Sbjct: 1   MVRYSLDPENPTKSCKSRGSNLRVHF 26


>BC066324-1|AAH66324.1|  184|Homo sapiens ribosomal protein L17
           protein.
          Length = 184

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +2

Query: 38  MGRYSRXPDNPAKSCXARGSNLRVHF 115
           M RYS  P+NP KSC +RGSNLRVHF
Sbjct: 1   MVRYSLDPENPTKSCKSRGSNLRVHF 26


>BC066323-1|AAH66323.1|  184|Homo sapiens ribosomal protein L17
           protein.
          Length = 184

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +2

Query: 38  MGRYSRXPDNPAKSCXARGSNLRVHF 115
           M RYS  P+NP KSC +RGSNLRVHF
Sbjct: 1   MVRYSLDPENPTKSCKSRGSNLRVHF 26


>BC017831-1|AAH17831.1|  184|Homo sapiens ribosomal protein L17
           protein.
          Length = 184

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +2

Query: 38  MGRYSRXPDNPAKSCXARGSNLRVHF 115
           M RYS  P+NP KSC +RGSNLRVHF
Sbjct: 1   MVRYSLDPENPTKSCKSRGSNLRVHF 26


>BC000502-1|AAH00502.1|  184|Homo sapiens ribosomal protein L17
           protein.
          Length = 184

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +2

Query: 38  MGRYSRXPDNPAKSCXARGSNLRVHF 115
           M RYS  P+NP KSC +RGSNLRVHF
Sbjct: 1   MVRYSLDPENPTKSCKSRGSNLRVHF 26


>AB061824-1|BAB79462.1|  184|Homo sapiens ribosomal protein L17
           protein.
          Length = 184

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +2

Query: 38  MGRYSRXPDNPAKSCXARGSNLRVHF 115
           M RYS  P+NP KSC +RGSNLRVHF
Sbjct: 1   MVRYSLDPENPTKSCKSRGSNLRVHF 26


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,936,117
Number of Sequences: 237096
Number of extensions: 125398
Number of successful extensions: 172
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 76,859,062
effective HSP length: 19
effective length of database: 72,354,238
effective search space used: 1374730522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)