Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11f23
         (651 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK222953-1|BAD96673.1|  219|Homo sapiens 30 kDa protein variant ...   295   9e-80
BC022807-1|AAH22807.1|  261|Homo sapiens transmembrane protein 1...   295   1e-79
AF157321-1|AAF67487.1|  261|Homo sapiens 30 kDa protein protein.      295   1e-79
AK172843-1|BAD18807.1|  221|Homo sapiens protein ( Homo sapiens ...   292   8e-79

>AK222953-1|BAD96673.1|  219|Homo sapiens 30 kDa protein variant
           protein.
          Length = 219

 Score =  295 bits (724), Expect = 9e-80
 Identities = 133/184 (72%), Positives = 158/184 (85%)
 Frame = +2

Query: 98  PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLRE 277
           PELLLD NIR WV LPIVIITF VG++RHYVS++L S KK+   QV DSQV+IR+R+LRE
Sbjct: 4   PELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRILRE 63

Query: 278 NGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPMIV 457
           NGKY+P+QSF  R+++FNN E G+FK  KR     +PMTDP M+TDM+KGN+TNVLPMI+
Sbjct: 64  NGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMIL 123

Query: 458 IGGWINWMFSGFLTTKVPFPLTLRFKPMLQRGVELAYLDASWVSSASWYFLNVFGLRTIY 637
           IGGWIN  FSGF+TTKVPFPLTLRFKPMLQ+G+EL  LDASWVSSASWYFLNVFGLR+IY
Sbjct: 124 IGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIY 183

Query: 638 ALVL 649
           +L+L
Sbjct: 184 SLIL 187


>BC022807-1|AAH22807.1|  261|Homo sapiens transmembrane protein 111
           protein.
          Length = 261

 Score =  295 bits (723), Expect = 1e-79
 Identities = 133/184 (72%), Positives = 158/184 (85%)
 Frame = +2

Query: 98  PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLRE 277
           PELLLD NIR WV LPIVIITF VG++RHYVS++L S KK+   QV DSQV+IR+R+LRE
Sbjct: 4   PELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRE 63

Query: 278 NGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPMIV 457
           NGKY+P+QSF  R+++FNN E G+FK  KR     +PMTDP M+TDM+KGN+TNVLPMI+
Sbjct: 64  NGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMIL 123

Query: 458 IGGWINWMFSGFLTTKVPFPLTLRFKPMLQRGVELAYLDASWVSSASWYFLNVFGLRTIY 637
           IGGWIN  FSGF+TTKVPFPLTLRFKPMLQ+G+EL  LDASWVSSASWYFLNVFGLR+IY
Sbjct: 124 IGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIY 183

Query: 638 ALVL 649
           +L+L
Sbjct: 184 SLIL 187


>AF157321-1|AAF67487.1|  261|Homo sapiens 30 kDa protein protein.
          Length = 261

 Score =  295 bits (723), Expect = 1e-79
 Identities = 133/184 (72%), Positives = 158/184 (85%)
 Frame = +2

Query: 98  PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLRE 277
           PELLLD NIR WV LPIVIITF VG++RHYVS++L S KK+   QV DSQV+IR+R+LRE
Sbjct: 4   PELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRE 63

Query: 278 NGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPMIV 457
           NGKY+P+QSF  R+++FNN E G+FK  KR     +PMTDP M+TDM+KGN+TNVLPMI+
Sbjct: 64  NGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMIL 123

Query: 458 IGGWINWMFSGFLTTKVPFPLTLRFKPMLQRGVELAYLDASWVSSASWYFLNVFGLRTIY 637
           IGGWIN  FSGF+TTKVPFPLTLRFKPMLQ+G+EL  LDASWVSSASWYFLNVFGLR+IY
Sbjct: 124 IGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIY 183

Query: 638 ALVL 649
           +L+L
Sbjct: 184 SLIL 187


>AK172843-1|BAD18807.1|  221|Homo sapiens protein ( Homo sapiens
           cDNA FLJ24004 fis, clone KAT01090, highly similar to
           Homo sapiens 30 kDa protein (LOC55831). ).
          Length = 221

 Score =  292 bits (716), Expect = 8e-79
 Identities = 132/184 (71%), Positives = 157/184 (85%)
 Frame = +2

Query: 98  PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLRE 277
           PELLLD NIR WV LPIVIITF VG +RHYVS++L S KK+   QV DSQV+IR+R+LRE
Sbjct: 4   PELLLDSNIRLWVVLPIVIITFFVGTIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRE 63

Query: 278 NGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPMIV 457
           NGKY+P+QSF  R+++FNN E G+FK  KR     +PMTDP M+TDM+KGN+TNVLPMI+
Sbjct: 64  NGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMIL 123

Query: 458 IGGWINWMFSGFLTTKVPFPLTLRFKPMLQRGVELAYLDASWVSSASWYFLNVFGLRTIY 637
           IGGWIN  FSGF+TTKVPFPLTLRFKPMLQ+G+EL  LDASWVSSASW+FLNVFGLR+IY
Sbjct: 124 IGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWHFLNVFGLRSIY 183

Query: 638 ALVL 649
           +L+L
Sbjct: 184 SLIL 187


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,529,719
Number of Sequences: 237096
Number of extensions: 1877684
Number of successful extensions: 3304
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3304
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)