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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11f03
         (623 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743...   100   2e-21
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384...    96   2e-20
04_04_1530 - 34182235-34182336,34182436-34182543,34183627-341837...    95   3e-20
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758...    95   3e-20
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508...    92   3e-19
04_04_1531 - 34184899-34185030,34185130-34185240,34185344-341854...    67   9e-12
04_04_1532 - 34187153-34187308,34187426-34187551,34187856-341879...    46   2e-05
01_05_0331 - 21057957-21058205,21059213-21059791                       33   0.24 
08_02_1422 - 26971803-26971900,26974083-26975061                       32   0.43 
05_04_0074 - 17677298-17677591,17679060-17679197,17682705-17683130     31   0.56 
02_01_0636 + 4768852-4769775,4770638-4771021                           31   0.56 
01_06_0962 + 33402971-33403345,33403633-33403767,33408316-33408597     31   0.56 
11_04_0419 - 17453913-17454041,17454373-17454431,17457498-174577...    30   1.7  
05_04_0076 - 17697893-17697922,17698312-17698707                       30   1.7  
02_01_0144 - 1038547-1039650                                           29   4.0  
07_03_0039 - 12718972-12720699                                         28   5.2  
09_03_0130 - 12609417-12610462,12610786-12611040,12611139-126112...    28   6.9  
08_01_0074 + 530207-532603                                             28   6.9  
06_01_0320 - 2320317-2320336,2320791-2320902,2321092-2321236,232...    28   6.9  
01_07_0275 + 42434082-42435152                                         28   6.9  
01_01_0939 - 7404209-7404490,7405057-7405368,7405470-7405609,740...    28   6.9  
12_02_0893 + 24077634-24078379,24079347-24080412,24080741-240808...    27   9.2  
12_02_0361 - 17979979-17979982,17980093-17981045                       27   9.2  
11_01_0327 - 2446949-2446999,2447060-2447299,2447542-2447813,244...    27   9.2  
01_06_1515 + 37903781-37903963,37904382-37904615                       27   9.2  

>05_07_0299 -
           29073900-29073984,29074125-29074158,29074269-29074351,
           29074457-29074607,29074853-29074957,29075099-29075168,
           29075374-29075410,29076732-29076843,29076956-29076983
          Length = 234

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
 Frame = +1

Query: 85  IIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSW 264
           ++  + RH A++++LHGLGD G  W+  +  +  P++K ICPTA+T PVT   GF   +W
Sbjct: 24  VVRPKGRHQATIVWLHGLGDNGASWSQLLDSLSLPNIKWICPTAATQPVTAFGGFPCTAW 83

Query: 265 FDLRTLDATAPEDEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQG----------- 411
           FD+        +D EG++ +   +  L++ E     P  K+ +GGFS G           
Sbjct: 84  FDVEDTSVDGRDDIEGLDASAAHIANLLSSE----PPDVKLGIGGFSMGAAASLYSAACY 139

Query: 412 GXXXXXXXXTYPERLAGVMSLSCWLPRHGYFPGGLKA-------PVDLPIFQAHGDKDPV 570
                     YP  L+ V+SLS WLP      G +++          LPI  +HG  D V
Sbjct: 140 AHGKFASGIPYPITLSAVISLSGWLPCSRTLRGKMESSHIAARRAASLPILLSHGRADEV 199

Query: 571 VSFK 582
           VS++
Sbjct: 200 VSYR 203


>01_01_0524 -
           3845637-3845727,3845803-3845896,3846415-3846497,
           3846587-3846737,3847113-3847217,3847351-3847420,
           3847551-3847587,3848155-3848257,3848441-3848480
          Length = 257

 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 19/191 (9%)
 Frame = +1

Query: 85  IIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSW 264
           ++  +  H A++++LHGLGD G  W+  +  +  P++K ICPTA T PV +  GF   +W
Sbjct: 25  VVRPKGAHKATIVWLHGLGDNGASWSQLLETLPLPNIKWICPTAPTRPVAVFGGFPSTAW 84

Query: 265 FDLRTLDATAPEDEEGIERATDLVHGLIADEVKAGVPAD-KVLLGGFSQG---------- 411
           FD+  L   AP+D EG++ +   V  L++ E     PAD K+ +GGFS G          
Sbjct: 85  FDVADLSEDAPDDVEGLDASAAHVANLLSTE-----PADIKLGVGGFSMGAATALYSATC 139

Query: 412 -GXXXXXXXXTYPERLAGVMSLSCWLPRHGYFPGGLKAPVD-------LPIFQAHGDKDP 567
                      YP  L+  + LS WLP        +++  +       +P+   HG  D 
Sbjct: 140 YAHGKYGNGNPYPVNLSVSVGLSGWLPCARSLKNKIESSQEAAQKASSIPLLLCHGKADD 199

Query: 568 VVSFKWGQMTA 600
           VV +K G+ +A
Sbjct: 200 VVLYKHGEKSA 210


>04_04_1530 -
           34182235-34182336,34182436-34182543,34183627-34183748,
           34183817-34183961,34184045-34184097,34184187-34184478
          Length = 273

 Score = 95.5 bits (227), Expect = 3e-20
 Identities = 63/189 (33%), Positives = 93/189 (49%), Gaps = 13/189 (6%)
 Frame = +1

Query: 64  RMEPNPVIIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVI---CPTASTMPVT 234
           R+ P P+  AA AR+ + +++LHGLGD+G            P  ++     P+A   PV+
Sbjct: 37  RLVPAPMAAAA-ARNRSFVLWLHGLGDSGPANEPIRNFFSAPEFRLTKWAFPSAPNSPVS 95

Query: 235 LNNGFRMPSWFDLRTLDATA--PEDEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQ 408
            N+G  MPSWFD+  L  ++  P+D+ G+ +A + VH +I  EV  G+P + + + GFSQ
Sbjct: 96  CNHGAVMPSWFDIHELPMSSGSPQDDSGVLKAVENVHAMIDKEVADGIPPENIFVCGFSQ 155

Query: 409 GG-------XXXXXXXXTYPERLAGVMSLSCWLPRHGYFPGGLKAPV-DLPIFQAHGDKD 564
           GG                YP+ L G    S WLP        +       PI  +HG  D
Sbjct: 156 GGRTSALHCALTLASVLLYPKTLGGGAVFSGWLPFGSSVTERISPEARKTPILWSHGIAD 215

Query: 565 PVVSFKWGQ 591
            VV F+ GQ
Sbjct: 216 NVVLFEAGQ 224


>01_05_0685 +
           24273331-24273569,24275429-24275465,24275739-24275808,
           24275978-24276082,24276205-24276355,24276454-24276536,
           24276619-24276712,24276796-24276883
          Length = 288

 Score = 95.5 bits (227), Expect = 3e-20
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 19/191 (9%)
 Frame = +1

Query: 85  IIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSW 264
           ++  + RH A++++LHGLGD G  W+  +  +  P++K ICPTA T PV    GF   +W
Sbjct: 57  VVRPKGRHQATIVWLHGLGDNGASWSQLLDSLPLPNIKWICPTAPTRPVAAFGGFPCTAW 116

Query: 265 FDLRTLDATAPEDEEGIERATDLVHGLIADEVKAGVPAD-KVLLGGFSQG---------- 411
           FD+        +D EG++ +   V  L++ E     P+D K+ +GGFS G          
Sbjct: 117 FDVEDTSVDGRDDIEGLDASAAHVANLLSSE-----PSDVKLGIGGFSMGAAAALHSAAC 171

Query: 412 -GXXXXXXXXTYPERLAGVMSLSCWLP-------RHGYFPGGLKAPVDLPIFQAHGDKDP 567
                      YP  L+ V+ LS WLP       +       L+    LPI  +HG  D 
Sbjct: 172 YAHGRFTNGVAYPVTLSAVIGLSGWLPCSRTLKSKMDSSQTALRRAGALPILLSHGRADE 231

Query: 568 VVSFKWGQMTA 600
           VV+++ G+ +A
Sbjct: 232 VVTYRNGEKSA 242


>04_01_0383 +
           5085697-5085724,5085816-5085927,5087249-5087285,
           5087512-5087581,5087704-5087808,5088022-5088172,
           5088257-5088339,5089152-5089372,5089465-5089501,
           5089668-5089753
          Length = 309

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
 Frame = +1

Query: 85  IIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSW 264
           I+  + RH A++++LHGLGD G  W+  +  +  P++K ICPTA+T PVT   GF   +W
Sbjct: 24  IVRPKGRHQATIVWLHGLGDNGASWSQLLDSLSLPNIKWICPTAATRPVTAFGGFPCTAW 83

Query: 265 FDLRTLDATAPEDEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQG----------- 411
           FD+  +     +D EG++ +   +  L++ E     P  K+ +GGFS G           
Sbjct: 84  FDVEDISVDGRDDIEGLDASAAHIANLLSSE----PPDVKLGIGGFSMGAAAALHSAACY 139

Query: 412 GXXXXXXXXTYPERLAGVMSLSCWLP 489
                     YP  L+ V+SLS WLP
Sbjct: 140 AHGKFANSMPYPITLSAVISLSGWLP 165


>04_04_1531 -
           34184899-34185030,34185130-34185240,34185344-34185465,
           34185541-34185664,34185815-34185867,34185984-34186146
          Length = 234

 Score = 67.3 bits (157), Expect = 9e-12
 Identities = 50/174 (28%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
 Frame = +1

Query: 118 LIFLHGLGDTGHGWASTIAG-IRGPH---VKVICPTASTMPVTLNNGFRMPSWFDLRTLD 285
           +++LHG G TG    + +A     P    V+   PTA T  +    G  + +WF +  + 
Sbjct: 10  VLWLHGSGQTGEESRAQVAPYFAAPELASVRFSFPTAPTSSIPCYGGEVITAWFAIPEVP 69

Query: 286 ATA--PEDEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLA 459
            TA    DE+ + +A + VH ++  EV AG     + + G SQGG         YP  L 
Sbjct: 70  ITARTARDEKEVLKAVERVHEMLDGEVAAGTSPSNIFVCGLSQGGALAIASVLLYPMTLG 129

Query: 460 GVMSLSCWLPRHGYFPGGLKAPV-DLPIFQAHGDKDPVVSFKWGQMTASCPQDI 618
           G +  S  LP    F   + +     P+   HG  D VV F+ G    +  Q+I
Sbjct: 130 GCVVFSGSLPLSKTFAESIPSEARKTPVLWFHGMADGVVLFEAGHAGCAFLQEI 183


>04_04_1532 -
           34187153-34187308,34187426-34187551,34187856-34187977,
           34188058-34188181,34189671-34189821,34190506-34190720,
           34191142-34191343,34191423-34191597,34191746-34192055,
           34192141-34192356
          Length = 598

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
 Frame = +1

Query: 301 DEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSC 480
           DEE + RA   VH +I  E+ AG     V + G SQGG         +P+ L G    S 
Sbjct: 428 DEEDVLRAVQSVHAMIDREIAAGTNPQDVFVFGLSQGGALGIASVLLHPKTLGGCAVFSG 487

Query: 481 WLPRHGYF-------PGGLKAPVDLPIFQAHGDKDPVVSFKWGQ 591
           +LP +  F          L+  +  P+   HG    ++  K G+
Sbjct: 488 FLPFNSSFAVRVTAQAKKLQCGLQTPVLWIHGQAGSLIPIKEGR 531


>01_05_0331 - 21057957-21058205,21059213-21059791
          Length = 275

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +1

Query: 346 IADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSCWLPRHGYFPGGLKAP 525
           + D V+A    ++ +L G S GG        T+P+++A  + ++ +LP     P     P
Sbjct: 70  LLDAVRALPDGERAVLVGHSFGGMSVALAAETFPDKVAAAVFVAAFLPDCANPP---SHP 126

Query: 526 VDLPIFQAHGDK 561
           +D  I   H DK
Sbjct: 127 IDTVINSYHDDK 138


>08_02_1422 - 26971803-26971900,26974083-26975061
          Length = 358

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 127 LHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNG 246
           LHG GD G  W+S++  +  PHV  + P      +  N G
Sbjct: 112 LHGYGDNGESWSSSLEQVPLPHVYPL-PVIEEFGIVPNGG 150


>05_04_0074 - 17677298-17677591,17679060-17679197,17682705-17683130
          Length = 285

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 367 GVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSCWLPRHG 498
           G   ++V+L G SQGG         +PER+A V+ L+  +P  G
Sbjct: 90  GDDEERVVLVGHSQGGFSVALAAERFPERVAAVVFLTAAMPPVG 133


>02_01_0636 + 4768852-4769775,4770638-4771021
          Length = 435

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +1

Query: 28  LAQHIDFPVINWRMEPNPVIIAAQARHTASLIFLHGLGDTGHGWASTI 171
           LA+ +D P+++ R+   PV++A+ A     +   H +      W+STI
Sbjct: 67  LARRLDAPLMSLRLGEVPVVVASSADAAREITKTHDVAFATRPWSSTI 114


>01_06_0962 + 33402971-33403345,33403633-33403767,33408316-33408597
          Length = 263

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 373 PADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSCWLPRH 495
           P +KV+L G S GG         +P+++A  + L  ++P H
Sbjct: 75  PGEKVVLVGHSLGGINVALAAELFPDKIAAAVFLCAFMPDH 115


>11_04_0419 -
           17453913-17454041,17454373-17454431,17457498-17457738,
           17458206-17458316
          Length = 179

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 598 PSFVPI*KIQL-GPYHHELGILVNQQEPLSLQGNNHVEVASRIG 470
           P+F P  K+Q+  P   ELG ++    P+   G+N ++    +G
Sbjct: 132 PTFTPTSKVQVQSPATKELGTMIRTLNPMDTDGSNSIDFHKFLG 175


>05_04_0076 - 17697893-17697922,17698312-17698707
          Length = 141

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 379 DKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSCWLPRHG 498
           ++V+L G S GG         +PERLA V+ L+  +P  G
Sbjct: 84  ERVVLVGHSHGGFSVALAAEWFPERLAAVVFLTASMPPVG 123


>02_01_0144 - 1038547-1039650
          Length = 367

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 21/58 (36%), Positives = 27/58 (46%)
 Frame = -1

Query: 521 AFKPPGK*PCRGSQQDRDMTPANLSGYVSAAYRANAPP*EKPPSRTLSAGTPALTSSA 348
           A +PP   P R S      TPA  S   + A  A  PP EK P +T S    A+ ++A
Sbjct: 26  ASQPPA--PPRPSNPRHRKTPAKASKTPAPATAAAPPPVEKRPIKTASDLAAAIRAAA 81


>07_03_0039 - 12718972-12720699
          Length = 575

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = +1

Query: 10  KIKGDKLAQHIDFPVINWRMEPNPVIIAAQARHTASLI-FLHGLGDTGHGWASTIAGIRG 186
           K+K DK AQHID      ++E    I   + +    +I  LH   DT       +   RG
Sbjct: 392 KMKADKRAQHID-----GKLEFLKSIGYGENKIATKIIAVLHSNRDTLQERFDCLLE-RG 445

Query: 187 PHVKVICPTASTMPVTLNNGFRM 255
              K++C   S  P  LN G +M
Sbjct: 446 LEYKMLCQIVSVFPKILNQGKKM 468


>09_03_0130 -
           12609417-12610462,12610786-12611040,12611139-12611253,
           12611376-12611428,12611854-12612114,12612252-12612302,
           12612412-12612660,12612779-12613007,12613292-12613666
          Length = 877

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 25  KLAQHIDFPVINWRMEPNPVIIAAQARHTASLIFLHGLGDTGHGWAST 168
           K+   I  PV+NW +    +II A  R T  +   +G+ + G    ST
Sbjct: 494 KVMGQIYIPVMNWFLMVMCIIIVATFRSTNDIANAYGIAEVGVMMVST 541


>08_01_0074 + 530207-532603
          Length = 798

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 301 DEEGIERATDLVHGLIADEVKAGVPADKV 387
           DE   ++A  L+H ++AD+ + G P D V
Sbjct: 179 DENRSQQALHLLHTMMADDTRGGCPPDVV 207


>06_01_0320 -
           2320317-2320336,2320791-2320902,2321092-2321236,
           2321353-2321459,2321572-2321665,2321752-2321948,
           2322311-2322382,2322504-2322618,2323060-2323176,
           2323253-2323344,2323445-2323621,2323746-2323820,
           2323911-2324051,2324671-2324859,2325298-2325363,
           2325445-2325595,2325718-2325786,2326293-2326441,
           2326526-2326657,2326756-2327081,2327167-2327203,
           2327926-2327980,2328242-2328309,2328464-2328466
          Length = 902

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +1

Query: 280 LDATAPEDEEGIERATDLVHGLIADEVKAGV 372
           L++  P DEEG+E A +L+H  + + V+ G+
Sbjct: 495 LESGKPVDEEGVEDAFELLHE-VNERVRTGI 524


>01_07_0275 + 42434082-42435152
          Length = 356

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 190 HVKVICPTASTMPVTLNNGFRMPSWFD 270
           H+KV CP  +T   T+N+  R P+ FD
Sbjct: 235 HLKVTCPVLNTNDTTVND-IRTPNTFD 260


>01_01_0939 -
           7404209-7404490,7405057-7405368,7405470-7405609,
           7406226-7406289,7406378-7406616,7406957-7406983,
           7407590-7407749
          Length = 407

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 360 NFISNQPMDEISGSLNTFFIFRSC-SVQRS*IKPRGHTETVVERHGHSRSR 211
           N  +  P ++ S + N      SC ++  S  KP  H E++V RH H R R
Sbjct: 279 NSANTAPGEKYSLAYNQTAFLLSCRTMMYSLRKPPKHFESLVARHFHERER 329


>12_02_0893 +
           24077634-24078379,24079347-24080412,24080741-24080866,
           24081278-24081384,24081720-24081744
          Length = 689

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 440 VSAAYRANAPP*EKPPSRTLSAGTPALTSSAIN 342
           +S AY A APP   PPSR  + G    ++ +++
Sbjct: 350 LSNAYLATAPPPPPPPSRQATTGNSQTSTVSVS 382


>12_02_0361 - 17979979-17979982,17980093-17981045
          Length = 318

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 298 EDEEGIERATDLVHGLIADEVKAG 369
           E+EE +E     VHGLIA E+ AG
Sbjct: 237 EEEEKLEAEIAKVHGLIAAEMAAG 260


>11_01_0327 -
           2446949-2446999,2447060-2447299,2447542-2447813,
           2447917-2447956,2448057-2448134,2448212-2448271,
           2448434-2448493,2449620-2449766,2449921-2450018,
           2450455-2450582,2451275-2451321
          Length = 406

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 280 LDATAPEDEEGIERATDLVHGLIADEVKAGVPADKVLLGGF 402
           L  ++ + EE + +  D +H  +A+ V  G P D   +G F
Sbjct: 330 LQQSSQQAEEALSQGLDQLHQSLAETVAGGSPLDDPNVGSF 370


>01_06_1515 + 37903781-37903963,37904382-37904615
          Length = 138

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +1

Query: 190 HVKVICPTASTMPVTLNNGFRMPSWFDLRTLDATAPEDEEGI 315
           H+ ++     T   T+  G  + SWF ++T+D     D++ I
Sbjct: 21  HIALLFLWTQTKSKTIEQGVGLVSWFGVQTIDRFEITDDQNI 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,331,731
Number of Sequences: 37544
Number of extensions: 377629
Number of successful extensions: 1014
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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