Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11e11
         (649 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein.         36   0.12 
BC026320-1|AAH26320.1| 1010|Homo sapiens oxoglutarate dehydrogen...    33   0.66 
AK001713-1|BAA91855.1| 1010|Homo sapiens protein ( Homo sapiens ...    33   0.66 
AB033116-1|BAA86604.2| 1011|Homo sapiens KIAA1290 protein protein.     33   0.66 

>AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein.
          Length = 2785

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -2

Query: 474  RFLSPEEPNVIRRFLDILFKSQRHFVGALCH 382
            RFL+  +P  I+ FLD+LF+  RHF    CH
Sbjct: 1043 RFLAGTQPEEIQIFLDLLFEPVRHFKNGECH 1073


>BC026320-1|AAH26320.1| 1010|Homo sapiens oxoglutarate
           dehydrogenase-like protein.
          Length = 1010

 Score = 33.5 bits (73), Expect = 0.66
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +1

Query: 412 RLKKDIKKASYYVWFLGAQESRGLRGEEFALPAITLLEERARELEPFKVTLQVSHKG-LK 588
           RL + ++   +      +++  GL G E  +PA+  + +++ E+    V L + H+G L 
Sbjct: 244 RLVRSMRFEDFLARKWSSEKRFGLEGCEVMIPALKTIIDKSSEMGIENVILGMPHRGRLN 303

Query: 589 IIQNVTAKGKQQTIKHFIP 645
           ++ NV  K  +Q    F P
Sbjct: 304 VLANVIRKDLEQIFCQFDP 322


>AK001713-1|BAA91855.1| 1010|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10851 fis, clone NT2RP4001483, moderately
           similar to 2-OXOGLUTARATE DEHYDROGENASE E1 COMPONENT
           PRECURSOR (EC ).
          Length = 1010

 Score = 33.5 bits (73), Expect = 0.66
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +1

Query: 412 RLKKDIKKASYYVWFLGAQESRGLRGEEFALPAITLLEERARELEPFKVTLQVSHKG-LK 588
           RL + ++   +      +++  GL G E  +PA+  + +++ E+    V L + H+G L 
Sbjct: 244 RLVRSMRFEDFLARKWSSEKRFGLEGCEVMIPALKTIIDKSSEMGIENVILGMPHRGRLN 303

Query: 589 IIQNVTAKGKQQTIKHFIP 645
           ++ NV  K  +Q    F P
Sbjct: 304 VLANVIRKDLEQIFCRFDP 322


>AB033116-1|BAA86604.2| 1011|Homo sapiens KIAA1290 protein protein.
          Length = 1011

 Score = 33.5 bits (73), Expect = 0.66
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +1

Query: 412 RLKKDIKKASYYVWFLGAQESRGLRGEEFALPAITLLEERARELEPFKVTLQVSHKG-LK 588
           RL + ++   +      +++  GL G E  +PA+  + +++ E+    V L + H+G L 
Sbjct: 245 RLVRSMRFEDFLARKWSSEKRFGLEGCEVMIPALKTIIDKSSEMGIENVILGMPHRGRLN 304

Query: 589 IIQNVTAKGKQQTIKHFIP 645
           ++ NV  K  +Q    F P
Sbjct: 305 VLANVIRKDLEQIFCQFDP 323


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,941,758
Number of Sequences: 237096
Number of extensions: 1484414
Number of successful extensions: 2740
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2740
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)