Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11e11
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34802-4|CAA84335.4|  365|Caenorhabditis elegans Hypothetical pr...    64   1e-10
Z81135-4|CAB03457.1|  500|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL032634-4|CAA21599.1|  500|Caenorhabditis elegans Hypothetical ...    28   6.6  
U41034-6|AAU05557.1|  538|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U41034-5|AAA82381.1|  567|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z34802-4|CAA84335.4|  365|Caenorhabditis elegans Hypothetical
           protein M88.4 protein.
          Length = 365

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 29/77 (37%), Positives = 48/77 (62%)
 Frame = +1

Query: 403 MALRLKKDIKKASYYVWFLGAQESRGLRGEEFALPAITLLEERARELEPFKVTLQVSHKG 582
           M+   +  I K+ +YVW+LG++E+ G+RG    LP +  L + + +  P K T+Q+S KG
Sbjct: 1   MSWFFQSKIAKSHFYVWYLGSKEADGVRGSAVVLPVMRQLLKESFKKTPSKATVQISSKG 60

Query: 583 LKIIQNVTAKGKQQTIK 633
           LK+IQ+V A  +   +K
Sbjct: 61  LKLIQSVPAMSRSGKVK 77


>Z81135-4|CAB03457.1|  500|Caenorhabditis elegans Hypothetical
           protein W01G7.5 protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -1

Query: 592 LFSGLYVKPAT*P*RVPTPLLSPRVT*SPVAQTPRPADREIPEPRGTKRNTTLS 431
           L SG    PA      P P  +P+   +P +    PA R IP    T  N+T++
Sbjct: 41  LLSGGAKTPARPTVAKPAPKPTPKSAPAPKSPKSPPARRSIPRAAATAANSTIN 94


>AL032634-4|CAA21599.1|  500|Caenorhabditis elegans Hypothetical
           protein W01G7.5 protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -1

Query: 592 LFSGLYVKPAT*P*RVPTPLLSPRVT*SPVAQTPRPADREIPEPRGTKRNTTLS 431
           L SG    PA      P P  +P+   +P +    PA R IP    T  N+T++
Sbjct: 41  LLSGGAKTPARPTVAKPAPKPTPKSAPAPKSPKSPPARRSIPRAAATAANSTIN 94


>U41034-6|AAU05557.1|  538|Caenorhabditis elegans Hypothetical
           protein M02D8.4c protein.
          Length = 538

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -2

Query: 429 DILFKSQRHFVGALCHCWITSIMSNCKWKNSKSEFATKAGLXIRTNTQQSR 277
           +IL++ +  F   + + WI ++M  C  K +  EF ++A      NT  S+
Sbjct: 445 EILWRQKEQFSDGVGYSWIDTLMKYCAAKITDKEF-SQASKLFPHNTPHSK 494


>U41034-5|AAA82381.1|  567|Caenorhabditis elegans Hypothetical
           protein M02D8.4a protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -2

Query: 429 DILFKSQRHFVGALCHCWITSIMSNCKWKNSKSEFATKAGLXIRTNTQQSR 277
           +IL++ +  F   + + WI ++M  C  K +  EF ++A      NT  S+
Sbjct: 445 EILWRQKEQFSDGVGYSWIDTLMKYCAAKITDKEF-SQASKLFPHNTPHSK 494


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,053,576
Number of Sequences: 27780
Number of extensions: 249448
Number of successful extensions: 624
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)