Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11e06
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77652-12|CAI70406.1|  310|Caenorhabditis elegans Hypothetical p...    28   5.9  
Z92972-3|CAB07488.1|  317|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z77652-12|CAI70406.1|  310|Caenorhabditis elegans Hypothetical
           protein C06B3.14 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 339 IYDFSLKFTNSLLRMYLHALTLHIYMFFFVA*LGGRA 229
           IY F   FT+  L +Y   L + + + FF+   GG A
Sbjct: 113 IYPFGRAFTSKKLWLYCLGLAMFLLILFFIPFFGGCA 149


>Z92972-3|CAB07488.1|  317|Caenorhabditis elegans Hypothetical
           protein T19C9.3 protein.
          Length = 317

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 356 YNNR*KYMIFH*NLLIHY*ECIYMHLLYIFTCFFLLLSW 240
           Y NR  Y I   + + HY   +Y+ L+YIF   F L  W
Sbjct: 110 YENR-FYTIIGPDSIWHYIRKVYLPLMYIFPLTFTLPIW 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,091,426
Number of Sequences: 27780
Number of extensions: 243021
Number of successful extensions: 466
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)