Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11e04
         (112 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    19   6.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    19   6.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    19   6.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          19   6.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    18   8.2  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 5/14 (35%), Positives = 8/14 (57%)
 Frame = -2

Query: 111 FFFHFKYVYNYIDR 70
           +FF+  Y+Y    R
Sbjct: 87  YFFYLSYIYTTYSR 100


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 5/14 (35%), Positives = 8/14 (57%)
 Frame = -2

Query: 111 FFFHFKYVYNYIDR 70
           +FF+  Y+Y    R
Sbjct: 43  YFFYLSYIYTTYSR 56


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 105 FHFKYVYNYIDRYSDY 58
           F+F Y YN    YS+Y
Sbjct: 211 FNFNYQYN--QAYSNY 224


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 105 FHFKYVYNYIDRYSDY 58
           F+F Y YN    YS+Y
Sbjct: 231 FNFNYQYN--QAYSNY 244


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 87  YNYIDRYSD 61
           Y Y DR+SD
Sbjct: 293 YEYQDRFSD 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,530
Number of Sequences: 336
Number of extensions: 223
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 17
effective length of database: 116,873
effective search space used:  2220587
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)