Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11d19
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775 45 6e-05
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 35 0.060
07_01_0010 + 72162-74303,74470-74545,75971-76043,76496-76540,779... 33 0.24
06_01_1179 + 10137652-10138038 32 0.32
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 31 0.56
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 31 0.56
02_05_1134 - 34352154-34352375,34353683-34353746,34353820-343548... 31 0.56
04_04_0765 - 27910189-27912393,27912521-27912598 30 1.7
12_01_0475 - 3722903-3723526,3724028-3724272,3725522-3725771 29 2.3
05_01_0301 - 2356880-2357959 29 3.0
12_01_0373 + 2897874-2898911 29 4.0
04_01_0312 + 4206400-4206627,4206661-4207269,4207425-4207902,420... 28 5.2
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851... 28 6.9
03_02_0310 + 7315185-7316820,7318332-7318879 28 6.9
02_05_0391 + 28563242-28563302,28563714-28563931,28564563-285646... 28 6.9
10_01_0154 - 1764554-1764727,1764829-1764927,1765710-1766172,176... 27 9.2
08_02_1509 + 27611628-27611810,27611890-27612903,27612996-276139... 27 9.2
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 27 9.2
>12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775
Length = 1123
Score = 44.8 bits (101), Expect = 6e-05
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 7/166 (4%)
Frame = +2
Query: 5 IESPTGVSATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEV-INDEVSVGSKTI 181
+E + +S TE + SV I + V +E + SATE I ++ S GS T
Sbjct: 435 VEKDSEISKTESVETASSV---VISEDDSTVDGKLVEPTASVSATETEIKEDSSEGSVTT 491
Query: 182 V---AAPAVVVNDVIESSTG-ASATEVINDEVSVGSKTIVAAPAVVVNDVIESSTGASAT 349
AA V V+E S AS+ E D+ +V K + +V + ES +S
Sbjct: 492 EPTEAASTEFVTAVVEESAPTASSVETSEDDSTVDDKLVEPTASVSATEA-ESKEDSSEG 550
Query: 350 EVINDEVSVGSKTIVAAP--AVVVNDPIESSTGASATEVINDEALV 481
V + E SV + +AP +V + P ++ ASA E+I D V
Sbjct: 551 SVASTE-SVTAVVEESAPVSSVAIEVPAPEASEASAQEIIEDSTTV 595
Score = 29.9 bits (64), Expect = 1.7
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 7/160 (4%)
Frame = +2
Query: 2 VIESPTGVSATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDEVSVGSKTI 181
V ES S+ E D+ +V K + +V + ES +S V + E SV +
Sbjct: 506 VEESAPTASSVETSEDDSTVDDKLVEPTASVSATEA-ESKEDSSEGSVASTE-SVTAVVE 563
Query: 182 VAAP--AVVVNDVIESSTGASATEVINDEVSV---GSKTIVAAPAVVVNDVIESSTGASA 346
+AP +V + ++ ASA E+I D +V V + + V SS GA
Sbjct: 564 ESAPVSSVAIEVPAPEASEASAQEIIEDSTTVEGAADDQTVESDSPPPEGVELSSNGAPD 623
Query: 347 TEVINDEVSVGSKTIVA--APAVVVNDPIESSTGASATEV 460
+ + D+ ++++ P ++ + A EV
Sbjct: 624 SSIAEDKPDEPEESLIVEEVPVTASSESEDKEPAAVPEEV 663
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 34.7 bits (76), Expect = 0.060
Identities = 32/154 (20%), Positives = 56/154 (36%)
Frame = -2
Query: 480 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 301
T+ S S +P S + + + PT S TS + +P S + + +
Sbjct: 1581 TSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1640
Query: 300 AGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPV 121
+ V PT + TS A +P S + + + + PT S TS + +P
Sbjct: 1641 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700
Query: 120 EDSIGSFTTTAGAATIVLEPTDTSSLITSVALTP 19
S + + + PT TS + +P
Sbjct: 1701 SPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSP 1734
Score = 33.5 bits (73), Expect = 0.14
Identities = 33/154 (21%), Positives = 55/154 (35%)
Frame = -2
Query: 480 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 301
T+ S S + +P S + T + PT S TS + +P S + + +
Sbjct: 1567 TSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1626
Query: 300 AGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPV 121
+ PT S TS +P + + + + PT S TS + +P
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1686
Query: 120 EDSIGSFTTTAGAATIVLEPTDTSSLITSVALTP 19
S + + + PT S TS A +P
Sbjct: 1687 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP 1720
Score = 33.5 bits (73), Expect = 0.14
Identities = 31/151 (20%), Positives = 53/151 (35%)
Frame = -2
Query: 459 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIV 280
TS + +P S + + + PT S TS + +P S + + +
Sbjct: 1595 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPA 1654
Query: 279 LEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSIGSF 100
PT + TS + +P S + + + + PT S TS + +P S
Sbjct: 1655 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1714
Query: 99 TTTAGAATIVLEPTDTSSLITSVALTPVGDS 7
+ + PT S TS +P S
Sbjct: 1715 SPAYSPTSPGYSPTSPSYSPTSPNYSPTSPS 1745
Score = 33.1 bits (72), Expect = 0.18
Identities = 28/124 (22%), Positives = 46/124 (37%)
Frame = -2
Query: 378 PTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTT 199
PT S S +P S + + + + PT S TS + +P S + +
Sbjct: 1580 PTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Query: 198 TAGAATIVLEPTDTSSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALTP 19
+ + V PT + TS A +P S + + + PT S TS + +P
Sbjct: 1640 SYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1699
Query: 18 VGDS 7
S
Sbjct: 1700 TSPS 1703
Score = 32.3 bits (70), Expect = 0.32
Identities = 28/124 (22%), Positives = 44/124 (35%)
Frame = -2
Query: 378 PTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTT 199
PT S S + +P S T + T + PT S TS + +P S + +
Sbjct: 1566 PTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1625
Query: 198 TAGAATIVLEPTDTSSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALTP 19
+ + PT S TS +P + + + PT S TS + +P
Sbjct: 1626 SYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSP 1685
Query: 18 VGDS 7
S
Sbjct: 1686 TSPS 1689
Score = 31.9 bits (69), Expect = 0.43
Identities = 28/145 (19%), Positives = 54/145 (37%)
Frame = -2
Query: 480 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 301
T+ S TS + +P S + + + V PT + TS A +P S + + +
Sbjct: 1616 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPS 1675
Query: 300 AGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPV 121
+ PT S TS + +P S + + + + PT TS + +P
Sbjct: 1676 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1735
Query: 120 EDSIGSFTTTAGAATIVLEPTDTSS 46
+ + + ++ P+ S
Sbjct: 1736 SPNYSPTSPSYNPSSAKYSPSHAYS 1760
Score = 31.1 bits (67), Expect = 0.74
Identities = 31/154 (20%), Positives = 54/154 (35%)
Frame = -2
Query: 480 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 301
T+ S TS + +P S + + + PT S TS +P + + +
Sbjct: 1602 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPA 1661
Query: 300 AGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPV 121
+ PT S TS + +P S + + + + PT S TS A +P
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1721
Query: 120 EDSIGSFTTTAGAATIVLEPTDTSSLITSVALTP 19
+ + + PT S +S +P
Sbjct: 1722 SPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSP 1755
Score = 29.9 bits (64), Expect = 1.7
Identities = 30/154 (19%), Positives = 54/154 (35%)
Frame = -2
Query: 480 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 301
T+ S TS + +P S + + + PT S TS + +P + +
Sbjct: 1595 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPA 1654
Query: 300 AGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPV 121
+ PT S TS + +P S + + + + PT S TS + +P
Sbjct: 1655 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1714
Query: 120 EDSIGSFTTTAGAATIVLEPTDTSSLITSVALTP 19
+ + + PT + TS + P
Sbjct: 1715 SPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNP 1748
>07_01_0010 +
72162-74303,74470-74545,75971-76043,76496-76540,
77916-78116,78463-78541,78637-78678,78788-78847,
79087-80484,80777-80902,81037-81300
Length = 1501
Score = 32.7 bits (71), Expect = 0.24
Identities = 25/117 (21%), Positives = 46/117 (39%)
Frame = +2
Query: 29 ATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDEVSVGSKTIVAAPAVVVN 208
ATE++ D V G ++N A E+ N+ + G K + +V
Sbjct: 309 ATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVK 368
Query: 209 DVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVINDEVSVG 379
+ A +V+N+ G + +V+N + + + AT V+ND + G
Sbjct: 369 GLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 425
Score = 30.7 bits (66), Expect = 0.98
Identities = 24/112 (21%), Positives = 44/112 (39%)
Frame = +2
Query: 134 ATEVINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVN 313
ATE++ D V G ++N + A E+ N+ + G K + +V
Sbjct: 309 ATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVK 368
Query: 314 DVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVIND 469
+ A +V+N+ G + +V+N + + AT V+ND
Sbjct: 369 GLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMND 420
>06_01_1179 + 10137652-10138038
Length = 128
Score = 32.3 bits (70), Expect = 0.32
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = -2
Query: 483 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSS-LITSVALAPVEDSITSFT 307
+ A++ I++ A AP E + + AAT PT S+ A AP TS
Sbjct: 12 ILTAAAAISAAAQAPAESPSPKPSKSTAAATPAKAPTVASAPRKAGPAAAPTTTVATS-- 69
Query: 306 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGA 187
AG + + PT +++++ VA P + + F + AGA
Sbjct: 70 APAGGDEVSIPPTPFATVVSPVADGPADAADADF-SGAGA 108
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 31.5 bits (68), Expect = 0.56
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Frame = -2
Query: 456 SVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVED--SITSF-TTTAGAAT 286
S LA +D +GS TTA A+ + E T + + + S + V+D SI+ + AG+
Sbjct: 3066 SAQLADGDDLVGSKDTTAAHASGLKELT-SGNYVASSSSHVVQDVTSISKMESVQAGSEE 3124
Query: 285 IVLEPTDTSSLITSVALAPVEDS-ITSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSI 109
I +D + I S + PV + IT + A A I ++P + + +L +E SI
Sbjct: 3125 IYHGYSDET--IHSARIKPVVGTEITENASVASAPVITIQPDIETEAGVTASLTVLEGSI 3182
Query: 108 GSFTTT 91
T
Sbjct: 3183 AEEVDT 3188
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 31.5 bits (68), Expect = 0.56
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Frame = +2
Query: 89 AVVVNDPIESSTGASATEVINDEVSVGSKTIVAAPAVVVN-DVIESSTGASATEVINDEV 265
A+ N + T +S+++ +DE S AAP + I+ T S + + +
Sbjct: 168 ALATNGSKKVETDSSSSDSSSDEESDEDDKKTAAPVKKPSVAAIQKKTQESDSSDSDSDS 227
Query: 266 SVGSKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGA 445
APAV E S+ +S +E +D +KTI+ A A V ESS +
Sbjct: 228 ESDEDVPTKAPAVAKKK--EESSESSDSESDSDSDDEAAKTIIPAKAAAVKKEEESSDSS 285
Query: 446 SA 451
+
Sbjct: 286 DS 287
Score = 29.5 bits (63), Expect = 2.3
Identities = 31/138 (22%), Positives = 55/138 (39%)
Frame = +2
Query: 8 ESPTGVSATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDEVSVGSKTIVA 187
+S + S+++ +DE + V P+V I+ T S + + +
Sbjct: 180 DSSSSDSSSDEESDEDDKKTAAPVKKPSVAA---IQKKTQESDSSDSDSDSESDEDVPTK 236
Query: 188 APAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVINDE 367
APAV E S+ +S +E +D +KTI+ A A V ESS + + +
Sbjct: 237 APAVAKKK--EESSESSDSESDSDSDDEAAKTIIPAKAAAVKKEEESSDSSDSDSESESD 294
Query: 368 VSVGSKTIVAAPAVVVND 421
+K + A + D
Sbjct: 295 SDEPAKPTIPAKRPLTKD 312
Score = 27.9 bits (59), Expect = 6.9
Identities = 25/97 (25%), Positives = 40/97 (41%)
Frame = +2
Query: 83 APAVVVNDPIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVINDE 262
APAV E S+ +S +E +D +KTI+ A A V ESS + + +
Sbjct: 237 APAVAKKK--EESSESSDSESDSDSDDEAAKTIIPAKAAAVKKEEESSDSSDSDSESESD 294
Query: 263 VSVGSKTIVAAPAVVVNDVIESSTGASATEVINDEVS 373
+K + A + D + +E +DE S
Sbjct: 295 SDEPAKPTIPAKRPLTKDT-KKGQSKDESEDSSDESS 330
>02_05_1134 - 34352154-34352375,34353683-34353746,34353820-34354859,
34355193-34355261,34355502-34355606,34355992-34356161,
34356244-34356351,34356397-34356525,34356577-34356681,
34357186-34357475,34357575-34357679,34358195-34358289,
34358474-34358569,34358660-34358782,34359120-34359174,
34359254-34359417,34359881-34359971,34360180-34360334,
34360823-34361002,34361314-34361487,34361776-34361917,
34362023-34362325,34362443-34362522
Length = 1354
Score = 31.5 bits (68), Expect = 0.56
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 26 SATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDE-VSVGSKTIVAAP-AV 199
++T+++ D +S+GS P + P ++ T V + + VS S+ P A
Sbjct: 690 ASTDILIDLLSIGSSPSQNGPPAADSTPAQAITELFKINVPDTKPVSTISQVGAIVPEAT 749
Query: 200 VVNDVIESSTGASATEVINDEVSVGSKTIVAAPA-VVVNDVIESSTGAS 343
V + SST SA ++D G+K+ A P + + D + S+T S
Sbjct: 750 DVLSSLSSSTSVSAFAKMSDTSIAGTKSAPAVPQDMDLLDGLPSNTSVS 798
Score = 29.5 bits (63), Expect = 2.3
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Frame = +2
Query: 95 VVNDPIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVINDE-VSV 271
+ + P + + AS T+++ D +S+GS P + ++ T V + + VS
Sbjct: 679 ISSSPAAAPSSAS-TDILIDLLSIGSSPSQNGPPAADSTPAQAITELFKINVPDTKPVST 737
Query: 272 GSKTIVAAP-AVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPA-VVVNDPIESSTGA 445
S+ P A V + SST SA ++D G+K+ A P + + D + S+T
Sbjct: 738 ISQVGAIVPEATDVLSSLSSSTSVSAFAKMSDTSIAGTKSAPAVPQDMDLLDGLPSNTSV 797
Query: 446 S 448
S
Sbjct: 798 S 798
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 29.9 bits (64), Expect = 1.7
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Frame = +2
Query: 74 IVAAPAVVVNDPIESSTGASATEVINDEVSVG-SKTIVAAPAVVVNDVIESSTGASATEV 250
+ A+P VV P+++ + A+ + G VAA V+ + +A V
Sbjct: 367 VTASPVDVV-PPVDAGSPAADVATTCSPAAAGMPAAAVAAAGSTAPAVVAPDSPVAAVAV 425
Query: 251 INDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVI-NDEVSVGSKTIVAAPAVVVNDPI 427
+ +V + + AA V + V SS+ A+A + V V S ++VA V P+
Sbjct: 426 FSSPTAVAASSSPAASPVDI--VAASSSPAAAVAAFGSPAVVVASNSLVAGSLAAVVSPV 483
Query: 428 ESSTGASA 451
+++ +A
Sbjct: 484 CATSPVAA 491
>12_01_0475 - 3722903-3723526,3724028-3724272,3725522-3725771
Length = 372
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +2
Query: 179 IVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVI 358
+ A A + DV+ +G V+ND+ G ++ VVV + G A E+
Sbjct: 273 LTARTAGIDEDVVLLDSGDGKVAVVNDDDDSGPLVVLQRRVVVVEEKGSLILGVEAAEIG 332
Query: 359 NDEV 370
++E+
Sbjct: 333 SEEI 336
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +2
Query: 284 IVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVI 463
+ A A + DV+ +G V+ND+ G ++ VVV + G A E+
Sbjct: 273 LTARTAGIDEDVVLLDSGDGKVAVVNDDDDSGPLVVLQRRVVVVEEKGSLILGVEAAEIG 332
Query: 464 NDE 472
++E
Sbjct: 333 SEE 335
>05_01_0301 - 2356880-2357959
Length = 359
Score = 29.1 bits (62), Expect = 3.0
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = -2
Query: 429 SIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLI 250
+IG T A V++ D SL+ + A AP S+ + A AT+ + P D
Sbjct: 214 AIGDEMTAASGIGGVVDENDPRSLVCAYAFAPCGYSMNALDG-ARYATVHVTPEDGHCYA 272
Query: 249 T--------SVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALA 127
+ + ALA + ++ +F + +I + SSL T VA A
Sbjct: 273 SFECATDDAAAALAAIRRAVAAFRPATVSVSISHTSSAASSLCTPVAEA 321
>12_01_0373 + 2897874-2898911
Length = 345
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = -2
Query: 465 LITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAA 289
L+ ++A P S + TTT AAT T S+ TS + TS T A AA
Sbjct: 254 LLLALAAVPSSSSSDTTTTTTAAATTTTSDTSCSTASTST----TSNGATSVTAAATAA 308
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = -2
Query: 360 LITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAA 184
L+ ++A P S + TTT AAT T S+ TS + TS T A AA
Sbjct: 254 LLLALAAVPSSSSSDTTTTTTAAATTTTSDTSCSTASTST----TSNGATSVTAAATAA 308
>04_01_0312 +
4206400-4206627,4206661-4207269,4207425-4207902,
4208006-4208297,4209278-4209569,4210013-4210465
Length = 783
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 575 YSNLVALRYLKLLVQPQPRLL*WFLL 498
Y+N AL+YL +PRLL W LL
Sbjct: 547 YTNHAALKYLLTKKDAKPRLLRWILL 572
>09_02_0393 +
8510089-8510274,8510450-8510806,8510889-8511011,
8511209-8511523,8511576-8511682,8512559-8512629,
8512952-8513029,8513390-8513454,8514224-8514274,
8514373-8514414,8514785-8515105,8515154-8517880
Length = 1480
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 167 GSKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVN 313
G K+ + +PA+ + S+ S T+ +N+EV+ +T+ AV+V+
Sbjct: 478 GMKSRILSPALPQQSYLSSAELPSLTDHVNEEVAKLDRTVRRITAVLVD 526
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 272 GSKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVN 418
G K+ + +PA+ + S+ S T+ +N+EV+ +T+ AV+V+
Sbjct: 478 GMKSRILSPALPQQSYLSSAELPSLTDHVNEEVAKLDRTVRRITAVLVD 526
>03_02_0310 + 7315185-7316820,7318332-7318879
Length = 727
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 387 VLEPTD-TSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSIT 211
++ P D T+S++ + S+T T+ A + TD SL T + P + S
Sbjct: 530 IISPLDATNSILQFFKYGVTDYSVTGSTSKGILAAQASQSTDMRSLQTP-TITPPKSSFN 588
Query: 210 SFTTTAGAATIVLEPT 163
TTT+ T L+P+
Sbjct: 589 FKTTTSILDTDALKPS 604
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 282 VLEPTD-TSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSIG 106
++ P D T+S++ + S+T T+ A + TD SL T + P + S
Sbjct: 530 IISPLDATNSILQFFKYGVTDYSVTGSTSKGILAAQASQSTDMRSLQTP-TITPPKSSFN 588
Query: 105 SFTTTAGAATIVLEPT 58
TTT+ T L+P+
Sbjct: 589 FKTTTSILDTDALKPS 604
>02_05_0391 +
28563242-28563302,28563714-28563931,28564563-28564637,
28564730-28565264,28565343-28565523,28565586-28565724,
28565826-28566067,28566157-28566322,28566591-28566698
Length = 574
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 11 SPTGVSATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDEVSVGSKTIVAA 190
+P ++ ++DE V S ++VAA + + P SST E G +T
Sbjct: 9 APPALAVGTSLSDEGQVSSGSLVAAVEITMMTPGSSSTSVPGDEADAGNWDAGVETAARL 68
Query: 191 PAVV 202
A+V
Sbjct: 69 EAMV 72
>10_01_0154 -
1764554-1764727,1764829-1764927,1765710-1766172,
1766255-1766541
Length = 340
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 308 VNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDEALV 481
V DV SS + N VS G+KT ++ P+V ++ + + T V+ND L+
Sbjct: 157 VEDVEISSQTLKVLTIKNTHVSYGNKTTISTPSVTY---LKLWSPLNGTYVLNDMPLL 211
>08_02_1509 +
27611628-27611810,27611890-27612903,27612996-27613978,
27614079-27614352
Length = 817
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = -2
Query: 420 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 241
+FT AA+++L +S + S+ +PV+ T AAT++L T+TSS+ +
Sbjct: 120 AFTYATVAASLLLAAVVSSGMYGSMMHSPVK------TPELLAATLMLALTNTSSIAVAR 173
Query: 240 ALAPVEDSITS---FTTTAGAAT 181
A ++ ++T AG AT
Sbjct: 174 IAAELKLTVTENGRLVVAAGIAT 196
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/89 (17%), Positives = 35/89 (39%)
Frame = -2
Query: 444 APVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTD 265
+PV G ++A ++ P +S + + E++ + A ++ +PT
Sbjct: 263 SPVTGKRGRPASSASSSGSAPAPAPPASSRLQLVITEEEEAAMTLLDIASGCSLDHQPTQ 322
Query: 264 TSSLITSVALAPVEDSITSFTTTAGAATI 178
+ + + LAP D + S G +
Sbjct: 323 PAHVADAALLAPASDQMPSVDVEQGVLAV 351
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,576,767
Number of Sequences: 37544
Number of extensions: 263928
Number of successful extensions: 942
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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