Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11d12
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81788-1|CAA57387.1| 206|Homo sapiens ICT1 protein protein. 122 1e-27
BT007111-1|AAP35775.1| 206|Homo sapiens immature colon carcinom... 122 1e-27
BC015335-1|AAH15335.1| 206|Homo sapiens immature colon carcinom... 122 1e-27
AK222553-1|BAD96273.1| 206|Homo sapiens immature colon carcinom... 121 3e-27
BC016445-1|AAH16445.1| 617|Homo sapiens vacuolar protein sortin... 31 2.7
AK027754-1|BAB55345.1| 617|Homo sapiens protein ( Homo sapiens ... 31 2.7
AF308803-1|AAG34680.1| 617|Homo sapiens vacuolar protein sortin... 31 2.7
AF201694-1|AAF91174.1| 617|Homo sapiens vacuolar protein sortin... 31 2.7
Y00318-3|CAA68418.1| 244|Homo sapiens protein ( Human mRNA for ... 31 4.6
Y00318-1|CAA68416.1| 565|Homo sapiens protein ( Human mRNA for ... 31 4.6
J02770-1|AAA52455.1| 583|Homo sapiens IF protein. 31 4.6
BC061518-1|AAH61518.1| 452|Homo sapiens IQCE protein protein. 30 8.1
BC043150-1|AAH43150.1| 630|Homo sapiens IQCE protein protein. 30 8.1
AL136792-1|CAB66726.1| 644|Homo sapiens hypothetical protein pr... 30 8.1
AB028946-1|BAA82975.2| 666|Homo sapiens KIAA1023 protein protein. 30 8.1
>X81788-1|CAA57387.1| 206|Homo sapiens ICT1 protein protein.
Length = 206
Score = 122 bits (294), Expect = 1e-27
Identities = 65/152 (42%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Frame = +3
Query: 189 YKSSISLETLYPNSSLKLTTPAFKPDGNEKFSGFIPIQKLDISYSASSGPGGQNVNKVHT 368
+KS SL+ LYP S T P+G ++ IP+ +L ISY SSGPGGQNVNKV++
Sbjct: 39 FKSIYSLDKLYPESQGSDTAWRV-PNGAKQADSDIPLDRLTISYCRSSGPGGQNVNKVNS 97
Query: 369 KVDLRFKLSDADWIHPDIRQRMLELYDKKLTKEGYLIIKSDCTRSQQLNLADCMRKLRNM 548
K ++RF L+ A+WI +RQ++ + K+ + G LI+ S+ +R Q NLADC++K+R+M
Sbjct: 98 KAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDM 157
Query: 549 IRDAEVTKREPSPETQE--RIRQRQLKAARLR 638
I +A T +EP+ E + RIR + RLR
Sbjct: 158 ITEASQTPKEPTKEDVKLHRIRIENMNRERLR 189
>BT007111-1|AAP35775.1| 206|Homo sapiens immature colon carcinoma
transcript 1 protein.
Length = 206
Score = 122 bits (294), Expect = 1e-27
Identities = 65/152 (42%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Frame = +3
Query: 189 YKSSISLETLYPNSSLKLTTPAFKPDGNEKFSGFIPIQKLDISYSASSGPGGQNVNKVHT 368
+KS SL+ LYP S T P+G ++ IP+ +L ISY SSGPGGQNVNKV++
Sbjct: 39 FKSIYSLDKLYPESQGSDTAWRV-PNGAKQADSDIPLDRLTISYCRSSGPGGQNVNKVNS 97
Query: 369 KVDLRFKLSDADWIHPDIRQRMLELYDKKLTKEGYLIIKSDCTRSQQLNLADCMRKLRNM 548
K ++RF L+ A+WI +RQ++ + K+ + G LI+ S+ +R Q NLADC++K+R+M
Sbjct: 98 KAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDM 157
Query: 549 IRDAEVTKREPSPETQE--RIRQRQLKAARLR 638
I +A T +EP+ E + RIR + RLR
Sbjct: 158 ITEASQTPKEPTKEDVKLHRIRIENMNRERLR 189
>BC015335-1|AAH15335.1| 206|Homo sapiens immature colon carcinoma
transcript 1 protein.
Length = 206
Score = 122 bits (294), Expect = 1e-27
Identities = 65/152 (42%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Frame = +3
Query: 189 YKSSISLETLYPNSSLKLTTPAFKPDGNEKFSGFIPIQKLDISYSASSGPGGQNVNKVHT 368
+KS SL+ LYP S T P+G ++ IP+ +L ISY SSGPGGQNVNKV++
Sbjct: 39 FKSIYSLDKLYPESQGSDTAWRV-PNGAKQADSDIPLDRLTISYCRSSGPGGQNVNKVNS 97
Query: 369 KVDLRFKLSDADWIHPDIRQRMLELYDKKLTKEGYLIIKSDCTRSQQLNLADCMRKLRNM 548
K ++RF L+ A+WI +RQ++ + K+ + G LI+ S+ +R Q NLADC++K+R+M
Sbjct: 98 KAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDM 157
Query: 549 IRDAEVTKREPSPETQE--RIRQRQLKAARLR 638
I +A T +EP+ E + RIR + RLR
Sbjct: 158 ITEASQTPKEPTKEDVKLHRIRIENMNRERLR 189
>AK222553-1|BAD96273.1| 206|Homo sapiens immature colon carcinoma
transcript 1 variant protein.
Length = 206
Score = 121 bits (291), Expect = 3e-27
Identities = 64/152 (42%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Frame = +3
Query: 189 YKSSISLETLYPNSSLKLTTPAFKPDGNEKFSGFIPIQKLDISYSASSGPGGQNVNKVHT 368
+KS SL+ LYP S T P+G ++ IP+ +L ISY SSGPGGQNVN+V++
Sbjct: 39 FKSIYSLDKLYPESQGSDTAWRV-PNGAKQADSDIPLDRLTISYCRSSGPGGQNVNRVNS 97
Query: 369 KVDLRFKLSDADWIHPDIRQRMLELYDKKLTKEGYLIIKSDCTRSQQLNLADCMRKLRNM 548
K ++RF L+ A+WI +RQ++ + K+ + G LI+ S+ +R Q NLADC++K+R+M
Sbjct: 98 KAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDM 157
Query: 549 IRDAEVTKREPSPETQE--RIRQRQLKAARLR 638
I +A T +EP+ E + RIR + RLR
Sbjct: 158 ITEASQTPKEPTKEDVKLHRIRIENMNRERLR 189
>BC016445-1|AAH16445.1| 617|Homo sapiens vacuolar protein sorting
33 homolog B (yeast) protein.
Length = 617
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 172 SNAVQVAFLIKPRIKFKRNVAKVILGETLSNMTHKNK 62
S+ Q+ FL++PRIK R +A ++ + L+ T K K
Sbjct: 76 SSNEQLCFLVRPRIKNMRYIASLVNADKLAGRTRKYK 112
>AK027754-1|BAB55345.1| 617|Homo sapiens protein ( Homo sapiens
cDNA FLJ14848 fis, clone PLACE1000492, highly similar to
Rat vacuolar protein sorting homolog r-vps33b mRNA. ).
Length = 617
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 172 SNAVQVAFLIKPRIKFKRNVAKVILGETLSNMTHKNK 62
S+ Q+ FL++PRIK R +A ++ + L+ T K K
Sbjct: 76 SSNEQLCFLVRPRIKNMRYIASLVNADKLAGRTRKYK 112
>AF308803-1|AAG34680.1| 617|Homo sapiens vacuolar protein sorting
protein 33B protein.
Length = 617
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 172 SNAVQVAFLIKPRIKFKRNVAKVILGETLSNMTHKNK 62
S+ Q+ FL++PRIK R +A ++ + L+ T K K
Sbjct: 76 SSNEQLCFLVRPRIKNMRYIASLVNADKLAGRTRKYK 112
>AF201694-1|AAF91174.1| 617|Homo sapiens vacuolar protein sorting
33B protein.
Length = 617
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 172 SNAVQVAFLIKPRIKFKRNVAKVILGETLSNMTHKNK 62
S+ Q+ FL++PRIK R +A ++ + L+ T K K
Sbjct: 76 SSNEQLCFLVRPRIKNMRYIASLVNADKLAGRTRKYK 112
>Y00318-3|CAA68418.1| 244|Homo sapiens protein ( Human mRNA for
complement control protein factor I. ).
Length = 244
Score = 30.7 bits (66), Expect = 4.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 402 DWIHPDIRQRMLELYDKKLTKEGY 473
DWIHPD+++ ++E D+ + E Y
Sbjct: 59 DWIHPDLKRIVIEYVDRIIFHENY 82
>Y00318-1|CAA68416.1| 565|Homo sapiens protein ( Human mRNA for
complement control protein factor I. ).
Length = 565
Score = 30.7 bits (66), Expect = 4.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 402 DWIHPDIRQRMLELYDKKLTKEGY 473
DWIHPD+++ ++E D+ + E Y
Sbjct: 380 DWIHPDLKRIVIEYVDRIIFHENY 403
>J02770-1|AAA52455.1| 583|Homo sapiens IF protein.
Length = 583
Score = 30.7 bits (66), Expect = 4.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 402 DWIHPDIRQRMLELYDKKLTKEGY 473
DWIHPD+++ ++E D+ + E Y
Sbjct: 398 DWIHPDLKRIVIEYVDRIIFHENY 421
>BC061518-1|AAH61518.1| 452|Homo sapiens IQCE protein protein.
Length = 452
Score = 29.9 bits (64), Expect = 8.1
Identities = 22/95 (23%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Frame = +3
Query: 387 KLSDADWIHPDIRQRMLELYDKKLTKEGYLI-IKSD--CTRSQQLNLA-----DCMRKLR 542
K DA W+ ++QR+L+L + K+G + +++D T +++ +A + + +L+
Sbjct: 188 KRPDASWVINGLKQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQ 247
Query: 543 NMIRDAEVTKREPSPETQERI-RQRQLKAARLRVA 644
++ +E T ++P E + RQ+++ +A L ++
Sbjct: 248 TLLASSETTGKKPLGEKKTGAKRQKKMGSALLSLS 282
>BC043150-1|AAH43150.1| 630|Homo sapiens IQCE protein protein.
Length = 630
Score = 29.9 bits (64), Expect = 8.1
Identities = 22/95 (23%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Frame = +3
Query: 387 KLSDADWIHPDIRQRMLELYDKKLTKEGYLI-IKSD--CTRSQQLNLA-----DCMRKLR 542
K DA W+ ++QR+L+L + K+G + +++D T +++ +A + + +L+
Sbjct: 139 KRPDASWVINGLKQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQ 198
Query: 543 NMIRDAEVTKREPSPETQERI-RQRQLKAARLRVA 644
++ +E T ++P E + RQ+++ +A L ++
Sbjct: 199 TLLASSETTGKKPLGEKKTGAKRQKKMGSALLSLS 233
>AL136792-1|CAB66726.1| 644|Homo sapiens hypothetical protein
protein.
Length = 644
Score = 29.9 bits (64), Expect = 8.1
Identities = 22/95 (23%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Frame = +3
Query: 387 KLSDADWIHPDIRQRMLELYDKKLTKEGYLI-IKSD--CTRSQQLNLA-----DCMRKLR 542
K DA W+ ++QR+L+L + K+G + +++D T +++ +A + + +L+
Sbjct: 153 KRPDASWVINGLKQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQ 212
Query: 543 NMIRDAEVTKREPSPETQERI-RQRQLKAARLRVA 644
++ +E T ++P E + RQ+++ +A L ++
Sbjct: 213 TLLASSETTGKKPLGEKKTGAKRQKKMGSALLSLS 247
>AB028946-1|BAA82975.2| 666|Homo sapiens KIAA1023 protein protein.
Length = 666
Score = 29.9 bits (64), Expect = 8.1
Identities = 22/95 (23%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Frame = +3
Query: 387 KLSDADWIHPDIRQRMLELYDKKLTKEGYLI-IKSD--CTRSQQLNLA-----DCMRKLR 542
K DA W+ ++QR+L+L + K+G + +++D T +++ +A + + +L+
Sbjct: 175 KRPDASWVINGLKQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQ 234
Query: 543 NMIRDAEVTKREPSPETQERI-RQRQLKAARLRVA 644
++ +E T ++P E + RQ+++ +A L ++
Sbjct: 235 TLLASSETTGKKPLGEKKTGAKRQKKMGSALLSLS 269
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,087,107
Number of Sequences: 237096
Number of extensions: 1599149
Number of successful extensions: 3092
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3092
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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