Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11d08
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.8  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +2

Query: 74   SRNPRQPLGDRVANISSTALSSIF 145
            S  PR   GDR    S  ALSS+F
Sbjct: 943  SGTPRSTNGDRKPGGSLGALSSMF 966


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 136 FYFSIFYRTSAIRGSGSIKYM 198
           FY S  Y T + + SG  KY+
Sbjct: 89  FYLSYIYTTYSRKLSGIFKYI 109


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 136 FYFSIFYRTSAIRGSGSIKYM 198
           FY S  Y T + + SG  KY+
Sbjct: 45  FYLSYIYTTYSRKLSGIFKYI 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,173
Number of Sequences: 336
Number of extensions: 3052
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)