Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11d06
(694 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107719-1|AAI07720.1| 338|Homo sapiens mitochondrial ribosomal... 167 3e-41
BC004896-1|AAH04896.2| 333|Homo sapiens MRPL39 protein protein. 167 3e-41
AF109357-1|AAQ13505.1| 333|Homo sapiens MSTP003 protein. 167 3e-41
AF239727-1|AAF44696.1| 296|Homo sapiens unknown protein. 160 4e-39
AK000458-1|BAA91177.1| 258|Homo sapiens protein ( Homo sapiens ... 140 6e-33
M63180-1|AAB04939.1| 712|Homo sapiens threonyl-tRNA synthetase ... 46 1e-04
BC088355-1|AAH88355.1| 682|Homo sapiens TARS protein protein. 46 1e-04
BC010578-1|AAH10578.2| 723|Homo sapiens threonyl-tRNA synthetas... 46 1e-04
BC000517-1|AAH00517.2| 723|Homo sapiens threonyl-tRNA synthetas... 46 1e-04
AK222804-1|BAD96524.1| 723|Homo sapiens threonyl-tRNA synthetas... 46 1e-04
BC132671-1|AAI32672.1| 802|Homo sapiens threonyl-tRNA synthetas... 46 1e-04
AF270511-1|AAK12856.1| 204|Homo sapiens mitochondrial ribosomal... 43 0.001
BC033094-1|AAH33094.1| 1332|Homo sapiens inhibitor of kappa ligh... 31 5.2
AL359692-2|CAI40569.1| 1332|Homo sapiens inhibitor of kappa ligh... 31 5.2
AL354797-1|CAI39465.1| 1332|Homo sapiens inhibitor of kappa ligh... 31 5.2
AF153419-1|AAG43369.1| 1332|Homo sapiens IkappaBkinase complex-a... 31 5.2
AF044195-1|AAC64258.1| 1332|Homo sapiens IkappaB kinase complex ... 31 5.2
AB210033-1|BAE06115.1| 1342|Homo sapiens IKBKAP variant protein ... 31 5.2
BC127102-1|AAI27103.1| 1214|Homo sapiens zinc finger E-box bindi... 30 6.8
BC127101-1|AAI27102.1| 1213|Homo sapiens zinc finger E-box bindi... 30 6.8
AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger ... 30 6.8
AY029472-1|AAK52081.1| 1214|Homo sapiens smad-interacting protei... 30 6.8
AC010130-1|AAX93276.1| 1079|Homo sapiens unknown protein. 30 6.8
AB056507-1|BAB40819.1| 1214|Homo sapiens Smad interacting protei... 30 6.8
AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger ... 30 6.8
AB011141-1|BAA25495.2| 1318|Homo sapiens KIAA0569 protein protein. 30 6.8
>BC107719-1|AAI07720.1| 338|Homo sapiens mitochondrial ribosomal
protein L39 protein.
Length = 338
Score = 167 bits (406), Expect = 3e-41
Identities = 86/187 (45%), Positives = 117/187 (62%), Gaps = 2/187 (1%)
Frame = +1
Query: 139 LSTQEAIERRSYLFTLEKKRQIENVGRIEKIEVQYKGIPKDCTL-VMNKNISTPYDCARH 315
LS E E R+ LF EK RQ+ R EKIEV++ G T+ VMNKNISTPY CA H
Sbjct: 35 LSPTELTEMRNDLFNKEKARQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMH 94
Query: 316 LSEWHMESSVLALLDGNLHWDMHRPLTESCTLEFQNYKAAEPQQVNKAFWRTCSLMLGAC 495
LSEW+ S+LAL+DG WDM++PLT+SC ++F +K +P +VNKA+WR+C++M+G
Sbjct: 95 LSEWYCRKSILALVDGQ-PWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRSCAMMMGCV 153
Query: 496 ATVAFKDTVPVHLHSFPLPDIRSGSFIYDVDLPT-LSDWQPTHQEVLTLAAEYVKLCRKA 672
AFKD V+L P + SG+F YDV L + L +W PT + + + + L K
Sbjct: 154 IERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKDAHALIYKD 213
Query: 673 VPLERLE 693
+P E LE
Sbjct: 214 LPFETLE 220
>BC004896-1|AAH04896.2| 333|Homo sapiens MRPL39 protein protein.
Length = 333
Score = 167 bits (406), Expect = 3e-41
Identities = 86/187 (45%), Positives = 117/187 (62%), Gaps = 2/187 (1%)
Frame = +1
Query: 139 LSTQEAIERRSYLFTLEKKRQIENVGRIEKIEVQYKGIPKDCTL-VMNKNISTPYDCARH 315
LS E E R+ LF EK RQ+ R EKIEV++ G T+ VMNKNISTPY CA H
Sbjct: 30 LSPTELTEMRNDLFNKEKARQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMH 89
Query: 316 LSEWHMESSVLALLDGNLHWDMHRPLTESCTLEFQNYKAAEPQQVNKAFWRTCSLMLGAC 495
LSEW+ S+LAL+DG WDM++PLT+SC ++F +K +P +VNKA+WR+C++M+G
Sbjct: 90 LSEWYCRKSILALVDGQ-PWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRSCAMMMGCV 148
Query: 496 ATVAFKDTVPVHLHSFPLPDIRSGSFIYDVDLPT-LSDWQPTHQEVLTLAAEYVKLCRKA 672
AFKD V+L P + SG+F YDV L + L +W PT + + + + L K
Sbjct: 149 IERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKDAHALIYKD 208
Query: 673 VPLERLE 693
+P E LE
Sbjct: 209 LPFETLE 215
>AF109357-1|AAQ13505.1| 333|Homo sapiens MSTP003 protein.
Length = 333
Score = 167 bits (406), Expect = 3e-41
Identities = 86/187 (45%), Positives = 117/187 (62%), Gaps = 2/187 (1%)
Frame = +1
Query: 139 LSTQEAIERRSYLFTLEKKRQIENVGRIEKIEVQYKGIPKDCTL-VMNKNISTPYDCARH 315
LS E E R+ LF EK RQ+ R EKIEV++ G T+ VMNKNISTPY CA H
Sbjct: 30 LSPTELTEMRNDLFNKEKARQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMH 89
Query: 316 LSEWHMESSVLALLDGNLHWDMHRPLTESCTLEFQNYKAAEPQQVNKAFWRTCSLMLGAC 495
LSEW+ S+LAL+DG WDM++PLT+SC ++F +K +P +VNKA+WR+C++M+G
Sbjct: 90 LSEWYCRKSILALVDGQ-PWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRSCAMMMGCV 148
Query: 496 ATVAFKDTVPVHLHSFPLPDIRSGSFIYDVDLPT-LSDWQPTHQEVLTLAAEYVKLCRKA 672
AFKD V+L P + SG+F YDV L + L +W PT + + + + L K
Sbjct: 149 IERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKDAHALIYKD 208
Query: 673 VPLERLE 693
+P E LE
Sbjct: 209 LPFETLE 215
>AF239727-1|AAF44696.1| 296|Homo sapiens unknown protein.
Length = 296
Score = 160 bits (389), Expect = 4e-39
Identities = 81/178 (45%), Positives = 113/178 (63%), Gaps = 2/178 (1%)
Frame = +1
Query: 166 RSYLFTLEKKRQIENVGRIEKIEVQYKGIPKDCTL-VMNKNISTPYDCARHLSEWHMESS 342
R+ LF EK RQ+ R EKIEV++ G T+ VMNKNISTPY CA HLSEW+ S
Sbjct: 2 RNDLFNKEKARQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMHLSEWYCRKS 61
Query: 343 VLALLDGNLHWDMHRPLTESCTLEFQNYKAAEPQQVNKAFWRTCSLMLGACATVAFKDTV 522
+LAL+DG WDM++PLT+SC ++F +K +P +VN+A+WR+C++M+G AFKD
Sbjct: 62 ILALVDGQ-PWDMYKPLTKSCEIKFLTFKDCDPGEVNEAYWRSCAMMMGCVIERAFKDEY 120
Query: 523 PVHLHSFPLPDIRSGSFIYDVDLPT-LSDWQPTHQEVLTLAAEYVKLCRKAVPLERLE 693
V+L P + SG+F YDV L + L +W PT + + + + L K +P E LE
Sbjct: 121 MVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKDAHALIYKDLPFETLE 178
>AK000458-1|BAA91177.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ20451 fis, clone KAT05657. ).
Length = 258
Score = 140 bits (338), Expect = 6e-33
Identities = 65/141 (46%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
Frame = +1
Query: 274 MNKNISTPYDCARHLSEWHMESSVLALLDGNLHWDMHRPLTESCTLEFQNYKAAEPQQVN 453
MNKNISTPY CA HLSEW+ S+LAL+DG WDM++PLT+SC ++F +K +P +VN
Sbjct: 1 MNKNISTPYSCAMHLSEWYCRKSILALVDGQ-PWDMYKPLTKSCEIKFLTFKDCDPGEVN 59
Query: 454 KAFWRTCSLMLGACATVAFKDTVPVHLHSFPLPDIRSGSFIYDVDLPT-LSDWQPTHQEV 630
+A+WR+C++M+G AFKD V+L P + SG+F YDV L + L +W PT + +
Sbjct: 60 EAYWRSCAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENL 119
Query: 631 LTLAAEYVKLCRKAVPLERLE 693
+ + L K +P E LE
Sbjct: 120 RSFTKDAHALIYKDLPFETLE 140
>M63180-1|AAB04939.1| 712|Homo sapiens threonyl-tRNA synthetase
protein.
Length = 712
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/67 (34%), Positives = 41/67 (61%)
Frame = +1
Query: 289 STPYDCARHLSEWHMESSVLALLDGNLHWDMHRPLTESCTLEFQNYKAAEPQQVNKAFWR 468
+TPY A +S+ +++V+A ++ N+ WD+ RPL E CTLE ++ E Q V +W
Sbjct: 88 TTPYQIACGISQGLADNTVIAKVN-NVVWDLDRPLEEDCTLELLKFEDEEAQAV---YWH 143
Query: 469 TCSLMLG 489
+ + ++G
Sbjct: 144 SSAHIMG 150
>BC088355-1|AAH88355.1| 682|Homo sapiens TARS protein protein.
Length = 682
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/67 (34%), Positives = 41/67 (61%)
Frame = +1
Query: 289 STPYDCARHLSEWHMESSVLALLDGNLHWDMHRPLTESCTLEFQNYKAAEPQQVNKAFWR 468
+TPY A +S+ +++V+A ++ N+ WD+ RPL E CTLE ++ E Q V +W
Sbjct: 100 TTPYQIACGISQGLADNTVIAKVN-NVVWDLDRPLEEDCTLELLKFEDEEAQAV---YWH 155
Query: 469 TCSLMLG 489
+ + ++G
Sbjct: 156 SSAHIMG 162
>BC010578-1|AAH10578.2| 723|Homo sapiens threonyl-tRNA synthetase
protein.
Length = 723
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/67 (34%), Positives = 41/67 (61%)
Frame = +1
Query: 289 STPYDCARHLSEWHMESSVLALLDGNLHWDMHRPLTESCTLEFQNYKAAEPQQVNKAFWR 468
+TPY A +S+ +++V+A ++ N+ WD+ RPL E CTLE ++ E Q V +W
Sbjct: 100 TTPYQIACGISQGLADNTVIAKVN-NVVWDLDRPLEEDCTLELLKFEDEEAQAV---YWH 155
Query: 469 TCSLMLG 489
+ + ++G
Sbjct: 156 SSAHIMG 162
>BC000517-1|AAH00517.2| 723|Homo sapiens threonyl-tRNA synthetase
protein.
Length = 723
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/67 (34%), Positives = 41/67 (61%)
Frame = +1
Query: 289 STPYDCARHLSEWHMESSVLALLDGNLHWDMHRPLTESCTLEFQNYKAAEPQQVNKAFWR 468
+TPY A +S+ +++V+A ++ N+ WD+ RPL E CTLE ++ E Q V +W
Sbjct: 100 TTPYQIACGISQGLADNTVIAKVN-NVVWDLDRPLEEDCTLELLKFEDEEAQAV---YWH 155
Query: 469 TCSLMLG 489
+ + ++G
Sbjct: 156 SSAHIMG 162
>AK222804-1|BAD96524.1| 723|Homo sapiens threonyl-tRNA synthetase
variant protein.
Length = 723
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/67 (34%), Positives = 41/67 (61%)
Frame = +1
Query: 289 STPYDCARHLSEWHMESSVLALLDGNLHWDMHRPLTESCTLEFQNYKAAEPQQVNKAFWR 468
+TPY A +S+ +++V+A ++ N+ WD+ RPL E CTLE ++ E Q V +W
Sbjct: 100 TTPYQIACGISQGLADNTVIAKVN-NVVWDLDRPLEEDCTLELLKFEDEEAQAV---YWH 155
Query: 469 TCSLMLG 489
+ + ++G
Sbjct: 156 SSAHIMG 162
>BC132671-1|AAI32672.1| 802|Homo sapiens threonyl-tRNA
synthetase-like 2 protein.
Length = 802
Score = 46.0 bits (104), Expect = 1e-04
Identities = 39/135 (28%), Positives = 63/135 (46%)
Frame = +1
Query: 289 STPYDCARHLSEWHMESSVLALLDGNLHWDMHRPLTESCTLEFQNYKAAEPQQVNKAFWR 468
+TPY A +S+ ES+V+A ++G L WD+ RPL +LE + E Q V +W
Sbjct: 179 TTPYQVAAEISQELAESTVIAKVNGEL-WDLDRPLEGDSSLELLTFDNEEAQAV---YWH 234
Query: 469 TCSLMLGACATVAFKDTVPVHLHSFPLPDIRSGSFIYDVDLPTLSDWQPTHQEVLTLAAE 648
+ + +LG + + H P I +G F YD+ + D + E+ L
Sbjct: 235 SSAHILGEAMELYYGG------HLCYGPPIENG-FYYDM---FIEDRAVSSTELSALENI 284
Query: 649 YVKLCRKAVPLERLE 693
+ ++ P ERLE
Sbjct: 285 CKAIIKEKQPFERLE 299
>AF270511-1|AAK12856.1| 204|Homo sapiens mitochondrial ribosomal
protein-L5 heart-specific splice-variant protein.
Length = 204
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 484 LGACATVAFKDTVPVHLHSFPLPDIRSGSFIYDVDLPT-LSDWQPTHQEVLTLAAEYVKL 660
+G AFKD V+L P + SG+F YDV L + L +W PT + + + + L
Sbjct: 1 MGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKDAHAL 60
Query: 661 CRKAVPLERLE 693
K +P E LE
Sbjct: 61 IYKDLPFETLE 71
>BC033094-1|AAH33094.1| 1332|Homo sapiens inhibitor of kappa light
polypeptide gene enhancer in B-cells, kinase complex-a
protein.
Length = 1332
Score = 30.7 bits (66), Expect = 5.2
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 82 LMKKLTEKSHFSTLQITRFLSTQEAIERRSYLFTLEK--KRQIENVGRIEKIEVQYKGIP 255
L+ + EKS + FL+T + +E FT++K KR + +G + K +Y P
Sbjct: 902 LVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEY--FP 959
Query: 256 KDCTLVMNKNI 288
+ L+ +KN+
Sbjct: 960 ECLNLIKDKNL 970
>AL359692-2|CAI40569.1| 1332|Homo sapiens inhibitor of kappa light
polypeptide gene enhancer in B-cells, kinase complex-a
protein.
Length = 1332
Score = 30.7 bits (66), Expect = 5.2
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 82 LMKKLTEKSHFSTLQITRFLSTQEAIERRSYLFTLEK--KRQIENVGRIEKIEVQYKGIP 255
L+ + EKS + FL+T + +E FT++K KR + +G + K +Y P
Sbjct: 902 LVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEY--FP 959
Query: 256 KDCTLVMNKNI 288
+ L+ +KN+
Sbjct: 960 ECLNLIKDKNL 970
>AL354797-1|CAI39465.1| 1332|Homo sapiens inhibitor of kappa light
polypeptide gene enhancer in B-cells, kinase complex-a
protein.
Length = 1332
Score = 30.7 bits (66), Expect = 5.2
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 82 LMKKLTEKSHFSTLQITRFLSTQEAIERRSYLFTLEK--KRQIENVGRIEKIEVQYKGIP 255
L+ + EKS + FL+T + +E FT++K KR + +G + K +Y P
Sbjct: 902 LVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEY--FP 959
Query: 256 KDCTLVMNKNI 288
+ L+ +KN+
Sbjct: 960 ECLNLIKDKNL 970
>AF153419-1|AAG43369.1| 1332|Homo sapiens IkappaBkinase
complex-associated protein protein.
Length = 1332
Score = 30.7 bits (66), Expect = 5.2
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 82 LMKKLTEKSHFSTLQITRFLSTQEAIERRSYLFTLEK--KRQIENVGRIEKIEVQYKGIP 255
L+ + EKS + FL+T + +E FT++K KR + +G + K +Y P
Sbjct: 902 LVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEY--FP 959
Query: 256 KDCTLVMNKNI 288
+ L+ +KN+
Sbjct: 960 ECLNLIKDKNL 970
>AF044195-1|AAC64258.1| 1332|Homo sapiens IkappaB kinase complex
associated protein protein.
Length = 1332
Score = 30.7 bits (66), Expect = 5.2
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 82 LMKKLTEKSHFSTLQITRFLSTQEAIERRSYLFTLEK--KRQIENVGRIEKIEVQYKGIP 255
L+ + EKS + FL+T + +E FT++K KR + +G + K +Y P
Sbjct: 902 LVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEY--FP 959
Query: 256 KDCTLVMNKNI 288
+ L+ +KN+
Sbjct: 960 ECLNLIKDKNL 970
>AB210033-1|BAE06115.1| 1342|Homo sapiens IKBKAP variant protein
protein.
Length = 1342
Score = 30.7 bits (66), Expect = 5.2
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 82 LMKKLTEKSHFSTLQITRFLSTQEAIERRSYLFTLEK--KRQIENVGRIEKIEVQYKGIP 255
L+ + EKS + FL+T + +E FT++K KR + +G + K +Y P
Sbjct: 912 LVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEY--FP 969
Query: 256 KDCTLVMNKNI 288
+ L+ +KN+
Sbjct: 970 ECLNLIKDKNL 980
>BC127102-1|AAI27103.1| 1214|Homo sapiens zinc finger E-box binding
homeobox 2 protein.
Length = 1214
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 181 TLEKKRQIENVGRIEKIEVQYKGIPKDCTLVMNKNISTPYDC 306
T + +RQI N+ + EK+ + D ++ N NISTP+ C
Sbjct: 544 TTDSRRQISNIKK-EKLRTLIDLVTDD-KMIENHNISTPFSC 583
>BC127101-1|AAI27102.1| 1213|Homo sapiens zinc finger E-box binding
homeobox 2 protein.
Length = 1213
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 181 TLEKKRQIENVGRIEKIEVQYKGIPKDCTLVMNKNISTPYDC 306
T + +RQI N+ + EK+ + D ++ N NISTP+ C
Sbjct: 543 TTDSRRQISNIKK-EKLRTLIDLVTDD-KMIENHNISTPFSC 582
>AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2764
Score = 30.3 bits (65), Expect = 6.8
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Frame = +1
Query: 55 MKMKRHVTCL------MKKLTEKSHFSTL--QITRFLSTQEAIERRSYLFTLEKKRQIEN 210
MK + HV C + ++E H T + T+ +ERR FTLE+K+++E
Sbjct: 1009 MKTESHVNCQESSQVDVVNVSEGFHLRTSYKKKTKSSKLDGLLERRIKQFTLEEKQRLEK 1068
Query: 211 VGRIEKIEVQYKGIPKDCTLVMNKNIS 291
+ K+E KGI K T +KN+S
Sbjct: 1069 I----KLEGGIKGIGKTST-NSSKNLS 1090
>AY029472-1|AAK52081.1| 1214|Homo sapiens smad-interacting protein-1
protein.
Length = 1214
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 181 TLEKKRQIENVGRIEKIEVQYKGIPKDCTLVMNKNISTPYDC 306
T + +RQI N+ + EK+ + D ++ N NISTP+ C
Sbjct: 544 TTDSRRQISNIKK-EKLRTLIDLVTDD-KMIENHNISTPFSC 583
>AC010130-1|AAX93276.1| 1079|Homo sapiens unknown protein.
Length = 1079
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 181 TLEKKRQIENVGRIEKIEVQYKGIPKDCTLVMNKNISTPYDC 306
T + +RQI N+ + EK+ + D ++ N NISTP+ C
Sbjct: 409 TTDSRRQISNIKK-EKLRTLIDLVTDD-KMIENHNISTPFSC 448
>AB056507-1|BAB40819.1| 1214|Homo sapiens Smad interacting protein 1
protein.
Length = 1214
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 181 TLEKKRQIENVGRIEKIEVQYKGIPKDCTLVMNKNISTPYDC 306
T + +RQI N+ + EK+ + D ++ N NISTP+ C
Sbjct: 544 TTDSRRQISNIKK-EKLRTLIDLVTDD-KMIENHNISTPFSC 583
>AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2781
Score = 30.3 bits (65), Expect = 6.8
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Frame = +1
Query: 55 MKMKRHVTCL------MKKLTEKSHFSTL--QITRFLSTQEAIERRSYLFTLEKKRQIEN 210
MK + HV C + ++E H T + T+ +ERR FTLE+K+++E
Sbjct: 883 MKTESHVNCQESSQVDVVNVSEGFHLRTSYKKKTKSSKLDGLLERRIKQFTLEEKQRLEK 942
Query: 211 VGRIEKIEVQYKGIPKDCTLVMNKNIS 291
+ K+E KGI K T +KN+S
Sbjct: 943 I----KLEGGIKGIGKTST-NSSKNLS 964
>AB011141-1|BAA25495.2| 1318|Homo sapiens KIAA0569 protein protein.
Length = 1318
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 181 TLEKKRQIENVGRIEKIEVQYKGIPKDCTLVMNKNISTPYDC 306
T + +RQI N+ + EK+ + D ++ N NISTP+ C
Sbjct: 648 TTDSRRQISNIKK-EKLRTLIDLVTDD-KMIENHNISTPFSC 687
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,952,476
Number of Sequences: 237096
Number of extensions: 2387197
Number of successful extensions: 9512
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 9301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9497
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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