Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11c22
(638 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 231 5e-62
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 204 1e-53
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 175 4e-45
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 175 4e-45
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 147 1e-36
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 123 2e-29
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 109 4e-25
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 89 7e-19
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 60 3e-10
SPBC83.06c |||mitochondrial ribosomal protein subunit L36|Schizo... 28 1.3
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 27 1.7
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 27 2.3
SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|... 25 7.0
SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase Met9|... 25 7.0
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 25 7.0
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 25 9.2
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 231 bits (566), Expect = 5e-62
Identities = 105/134 (78%), Positives = 113/134 (84%)
Frame = +3
Query: 237 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGD 416
+FDV A+G+PLGRIV KL D VPKTA NFRALCTGEKG+GY GS+FHR+IP FM QGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 417 FTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKH 596
FT NGTGGKSIYG F DENF LKH PG+LSMANAGPNTNGSQFFITTV TPWLD KH
Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKH 124
Query: 597 VVFGSVVEGMDVVQ 638
VVFG V EGMDVV+
Sbjct: 125 VVFGEVTEGMDVVK 138
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 204 bits (497), Expect = 1e-53
Identities = 94/135 (69%), Positives = 106/135 (78%)
Frame = +3
Query: 234 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGG 413
VYFD+ E LGR+ I L VPKTAENFRAL TGEKGFGY+GS FHR+IP+FM QGG
Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGG 88
Query: 414 DFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRK 593
D T +GTGGKSIYG F DENFKL H PG+LSMANAGP++NGSQFFITTV TPWLD
Sbjct: 89 DITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGH 148
Query: 594 HVVFGSVVEGMDVVQ 638
HVVFG V+ G D+V+
Sbjct: 149 HVVFGEVLSGYDIVK 163
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 175 bits (426), Expect = 4e-45
Identities = 84/138 (60%), Positives = 100/138 (72%), Gaps = 4/138 (2%)
Frame = +3
Query: 237 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG----YKGSSFHRIIPDFMC 404
YF ++ DG+ I +L + VPKT +NF +LC G + G YKGS FHR+I +FM
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 405 QGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWL 584
QGGDFT NGTGG+SIYG F DENF+LKH P +LSMANAGPNTNGSQFFITTVPTP L
Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHL 125
Query: 585 DRKHVVFGSVVEGMDVVQ 638
D KHVVFG V++G V+
Sbjct: 126 DGKHVVFGKVIQGKSTVR 143
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 175 bits (426), Expect = 4e-45
Identities = 89/149 (59%), Positives = 106/149 (71%), Gaps = 7/149 (4%)
Frame = +3
Query: 213 STQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGE------KGFGYKGSS 374
ST+P V+ D+ DG LGRI I+L + VPKTAENFR CTGE K GYK S+
Sbjct: 2 STEP--VVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNST 59
Query: 375 FHRIIPDFMCQGGDFTNHNGTGGKSIYG-RTFSDENFKLKHTGPGILSMANAGPNTNGSQ 551
FHRII FM QGGDF + +GTG +I+ RTF DENF LKH PG+LSMANAG ++NG Q
Sbjct: 60 FHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQ 119
Query: 552 FFITTVPTPWLDRKHVVFGSVVEGMDVVQ 638
FFITTVP +LD KHVVFG V+EG D+V+
Sbjct: 120 FFITTVPCDFLDGKHVVFGEVIEGYDIVK 148
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 147 bits (357), Expect = 1e-36
Identities = 74/123 (60%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Frame = +3
Query: 267 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 446
LG+I+I+L T+ PKT +NF L ++G+ Y G FHR+IPDF+ QGGD T G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65
Query: 447 SIYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 623
SIYG F DE + L HTG GILSMANAGPNTN SQFFIT PTPWLD KH +FG VV G
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSG 125
Query: 624 MDV 632
+ V
Sbjct: 126 LSV 128
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 123 bits (297), Expect = 2e-29
Identities = 66/123 (53%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Frame = +3
Query: 270 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 449
G I IKL +E PK +NF E G+ Y + FHRII +FM QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 450 IYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGM 626
I+ + F DE + LKH P +SMAN+GPNTNGSQFFITT TPWLD KH +F G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 627 DVV 635
DVV
Sbjct: 580 DVV 582
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 109 bits (261), Expect = 4e-25
Identities = 61/123 (49%), Positives = 77/123 (62%), Gaps = 1/123 (0%)
Frame = +3
Query: 270 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 449
G I I+L+TD P NF L ++G+ Y+ + FHR I FM QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 450 IYGRTFSDENFK-LKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGM 626
I+G+ F DE LKH GI+SMAN G NTNGSQFFI P LD KH +FG VV G+
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGL 400
Query: 627 DVV 635
+V+
Sbjct: 401 NVL 403
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 88.6 bits (210), Expect = 7e-19
Identities = 52/117 (44%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = +3
Query: 270 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 449
G I I+L EVPK NF LC +G+ Y G+ HR++P+F+ QGGD T G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77
Query: 450 IYGRTFSDENF-KLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVV 617
IYG F+ E +L+ G++ MA N SQFFIT PTP + K +FG VV
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 59.7 bits (138), Expect = 3e-10
Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Frame = +3
Query: 267 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 446
+G +VI L E PKT ENF LC K Y F+ I ++ CQ GD G GG+
Sbjct: 9 VGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGDGGR 65
Query: 447 SIYG------RTFSDE-NFKLKHTGPGILSMANAGPNTN-------GSQFFITTVPT-PW 581
++ R F E N L H G++SM+ A ++ GSQF IT
Sbjct: 66 CVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEG 125
Query: 582 LDRKHVVFGSVVEGMDVV 635
LD ++ ++G V EG D +
Sbjct: 126 LDERYPIYGQVAEGFDTL 143
>SPBC83.06c |||mitochondrial ribosomal protein subunit
L36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 59
Score = 27.9 bits (59), Expect = 1.3
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 74 SKVHIVKYTGRIYLVCDENPNHDT 145
S + V+ GR+Y++C ++P H T
Sbjct: 33 SSCYFVRRKGRLYVLCKKHPRHKT 56
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -3
Query: 279 LYVPMALRQQLHRNKLVYQVESKQNEVLQQSI 184
LYV +A R+++ R++L Q++++ LQQ +
Sbjct: 434 LYVALAQRKEVRRSQLEAQIQARNQFRLQQQV 465
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 630 HPYLQPQTQILHVFYPTKESELWL*KIETHLYS 532
HP +P T +L+ +P +++ L K++TH+ S
Sbjct: 391 HPPPKPNTGVLNPTFPPEKAPASLEKVDTHVTS 423
>SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 7.0
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -1
Query: 359 PKTFFTSTQSSKV--LSSFRYFIRVQFYDYTSQWL 261
P FF + +++ L S R F+ FYD+T+++L
Sbjct: 16 PSQFFAGSSLNRLSFLRSNREFLNKAFYDHTTRFL 50
>SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase
Met9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 603
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 314 SFRYFIRVQFYDYTSQWLSVSSYIEI-NLFIRLSRSK 207
+ RY +R+ + T+ W S SY EI +LF R K
Sbjct: 363 AIRYGLRMSPKEITTSWGSPKSYSEIGDLFARYCEKK 399
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 25.4 bits (53), Expect = 7.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 309 KTAENFRALCTGEKGFGYKGSSFHRIIP 392
K A F A+C EKG Y +FH +P
Sbjct: 414 KQALIFDAICLLEKGITYSQHNFHLKLP 441
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 25.0 bits (52), Expect = 9.2
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 492 HTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKH 596
H P S++ P +NG F + +P+ W + H
Sbjct: 345 HVVPEYSSISTFVPPSNGLMVFTSGIPSVWAEIDH 379
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,812,240
Number of Sequences: 5004
Number of extensions: 60177
Number of successful extensions: 178
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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