Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11c19
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           26   0.30 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.8  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.6  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = +3

Query: 60  QSTLILSEALSEAAGTLSRKLQDPARAPESASALTNMSTNLTSY*VTQFRP 212
           Q ++I+S ++++   T+ +  +  A APE  S L   +++L      QF P
Sbjct: 27  QQSIIVSGSITQPTKTVIQSKRPLAPAPERTSVLVTNNSDLRCKRKIQFMP 77


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 199 LSSGRQSSGILCGIHSGC 252
           + SGR S+  +CG H  C
Sbjct: 27  VGSGRNSAPSICGEHGHC 44


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 574 FFNNLQYSFSNSRS 533
           F +NLQYSF N  S
Sbjct: 208 FCDNLQYSFDNQCS 221


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 574 FFNNLQYSFSNSRS 533
           F +NLQYSF N  S
Sbjct: 199 FCDNLQYSFDNQCS 212


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 273 GNCTTPPAP*MDSAKNAATLPAGTELPNSS 184
           G+C T      DSA  A   P G+ LP++S
Sbjct: 4   GDCETEE----DSAPEACVSPEGSLLPSNS 29


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -2

Query: 181 KLVDIFVSADALSGARAGSWSLRDRV 104
           KL+ IF++A+++    + +   RDRV
Sbjct: 93  KLIRIFLAAESIDDLLSNAVFCRDRV 118


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 619 DEVFADYLTVLLQSFFFNNLQYSFSNSRSHRVSTES 512
           +E+ A   T L+    FNN  +   NS     +TES
Sbjct: 350 EEIVAGVTTYLVILIQFNNSDFVQRNSTEFDNATES 385


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,053
Number of Sequences: 336
Number of extensions: 3255
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)