Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11c19
(635 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 201 4e-52
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 193 1e-49
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 183 1e-46
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 104 7e-23
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 102 2e-22
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 102 3e-22
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 97 1e-20
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68... 95 5e-20
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 86 3e-17
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 75 5e-14
10_04_0016 + 7601796-7601999,7602495-7602543,7603140-7603165,760... 35 0.062
04_04_0012 + 22145111-22146388 33 0.19
05_06_0181 - 26178006-26178836 33 0.25
07_03_1197 + 24719746-24720081,24721726-24721976,24722065-247222... 31 0.77
06_03_1146 - 28004896-28005554,28005664-28005844 30 1.8
04_04_1193 + 31634043-31634349,31634685-31634847,31635048-316366... 29 3.1
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 28 7.1
04_01_0085 - 932461-932464,932656-933002,933387-935041,935084-93... 28 7.1
04_01_0084 - 912255-912368,912738-912822,914050-917105,920290-92... 28 7.1
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980... 27 9.4
08_01_0692 + 6121443-6122266,6122812-6124798 27 9.4
04_03_0482 - 16440489-16440734,16441613-16441652,16442378-16442406 27 9.4
04_03_0199 - 12559351-12559433,12559693-12559827,12560260-125604... 27 9.4
04_03_0153 + 11919769-11919880,11920190-11920488,11921909-119220... 27 9.4
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 201 bits (490), Expect = 4e-52
Identities = 105/213 (49%), Positives = 133/213 (62%), Gaps = 3/213 (1%)
Frame = +2
Query: 5 TATQSYRMAIPVPPGFYHAVHPDPFRGAFGGCRDSISQAPGSCSCTGECISTDKYVHQLN 184
TA ++++ ++ V G +HAV+PDP+RGAFG +KY +
Sbjct: 187 TAQKNWKFSV-VQSGVHHAVNPDPYRGAFGS-------------------DAEKYARDVQ 226
Query: 185 ELLGNSVPAGRVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRT 364
E++ G+VA F +E+IQG GG+V+ GYL A E ++ GGL +ADEVQ GF R
Sbjct: 227 EIIEFGT-TGQVAGFISEAIQGVGGIVELSPGYLPLAYEAVRSAGGLCIADEVQAGFARV 285
Query: 365 GDHFWGFETHGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTV 544
G HFWGFETHGV PDIVTMAKGIGNG PL AVVTT EIA + YFNTFGGNP+ +
Sbjct: 286 GSHFWGFETHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAQVLTRRCYFNTFGGNPLCTAG 345
Query: 545 GKAVLEVIEEEGLQQNSKVVGEYF---IRQLMD 634
G AVL V+E+EGLQ N+ VG Y +R L D
Sbjct: 346 GLAVLRVLEKEGLQANAHAVGSYLKDRLRALQD 378
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 193 bits (470), Expect = 1e-49
Identities = 98/194 (50%), Positives = 126/194 (64%)
Frame = +2
Query: 47 GFYHAVHPDPFRGAFGGCRDSISQAPGSCSCTGECISTDKYVHQLNELLGNSVPAGRVAA 226
G +HA++PDP+RGAFG GE KY + E++ GRV
Sbjct: 222 GVHHALNPDPYRGAFGS--------------DGE-----KYARDVQEIIDFGT-TGRVGG 261
Query: 227 FFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKP 406
F +E+IQG GG+V+ GYL +++K GGL +ADEVQ G RTG HFWGFE+HGV P
Sbjct: 262 FISEAIQGVGGIVELAPGYLPAVYNMVRKAGGLCIADEVQAGVARTGSHFWGFESHGVIP 321
Query: 407 DIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQ 586
DIVTMAKGIGNG P+ AVVTT EIA + +YFNTFGGNP+++ G AVL+V+E+E LQ
Sbjct: 322 DIVTMAKGIGNGIPIGAVVTTPEIAQVLTRRSYFNTFGGNPVSTAGGHAVLKVLEKEKLQ 381
Query: 587 QNSKVVGEYFIRQL 628
+N+ VVG Y +L
Sbjct: 382 ENAFVVGSYLKERL 395
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 183 bits (445), Expect = 1e-46
Identities = 98/212 (46%), Positives = 134/212 (63%), Gaps = 1/212 (0%)
Frame = +2
Query: 2 LTATQSYRMAIPVPPG-FYHAVHPDPFRGAFGGCRDSISQAPGSCSCTGECISTDKYVHQ 178
LT Q+++ P+P G +H ++PDP+RG FG D+++ Y +
Sbjct: 210 LTGLQTWKY--PIPQGEIHHVMNPDPYRGTFGS--DAVA-----------------YAKE 248
Query: 179 LNELLGNSVPAGRVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFG 358
+ E + N +GRVA F AE+ QG GG V+ GYLK A + ++K GG+ +ADEVQ+GFG
Sbjct: 249 VEEQI-NYGTSGRVAGFIAETFQGVGGAVELAPGYLKLAYDTVRKAGGVCIADEVQSGFG 307
Query: 359 RTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMAS 538
RTG H+WGF+T V PDIVTMAKGIGNG PL AVVTT EIA A+ FNTFGGNP+ S
Sbjct: 308 RTGSHYWGFQTQDVIPDIVTMAKGIGNGLPLGAVVTTPEIANVLAQKIQFNTFGGNPVCS 367
Query: 539 TVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMD 634
G AVL+V+++E Q + VG + + +L +
Sbjct: 368 VGGLAVLKVLDKEKRQAHCADVGSHLVNRLKE 399
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 104 bits (249), Expect = 7e-23
Identities = 53/134 (39%), Positives = 80/134 (59%), Gaps = 1/134 (0%)
Frame = +2
Query: 215 RVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETH 394
R+ F E IQG GV+ P GYLK ++L ++ L +ADE+QTG RTG +
Sbjct: 224 RICGFLFEPIQGEAGVIIPPDGYLKAVRDLCSRHNILMIADEIQTGIARTG-KMLACDWE 282
Query: 395 GVKPDIVTMAKGIGNG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIE 571
++PD+V + K +G G P++AV+ K+I + +TFGGNP+AS V A L+V+
Sbjct: 283 NIRPDVVILGKALGAGVVPVSAVLADKDIMLCIKPGEHGSTFGGNPLASAVAVASLKVVT 342
Query: 572 EEGLQQNSKVVGEY 613
+EGL ++ +V EY
Sbjct: 343 DEGLVESCMIVYEY 356
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 102 bits (245), Expect = 2e-22
Identities = 51/143 (35%), Positives = 81/143 (56%)
Frame = +2
Query: 203 VPAGRVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWG 382
+ +G++AA F E +QG GG+ K +L+ ++ + G L V DEVQ G GRTG + W
Sbjct: 242 IQSGKIAAVFVEPVQGEGGIHSATKEFLQGLRDACDEAGALLVFDEVQCGLGRTG-YLWA 300
Query: 383 FETHGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLE 562
+E +GV PDI+T+AK + G P+ V+ T+++A+ + TFGG P+ L+
Sbjct: 301 YEAYGVLPDIMTLAKPLAGGLPIGVVLVTEKVASAINFGDHGTTFGGGPLVCQAALTTLD 360
Query: 563 VIEEEGLQQNSKVVGEYFIRQLM 631
I++ G GE F +QL+
Sbjct: 361 KIQKPGFLAEVAKKGENF-KQLL 382
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 102 bits (244), Expect = 3e-22
Identities = 51/143 (35%), Positives = 81/143 (56%)
Frame = +2
Query: 203 VPAGRVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWG 382
+ +G++AA F E +QG GG+ K +L+ ++ + G L V DEVQ G GRTG + W
Sbjct: 253 IQSGKIAAVFVEPMQGEGGIHSATKEFLQGLRDACDEAGALLVFDEVQCGLGRTG-YLWA 311
Query: 383 FETHGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLE 562
+E +GV PDI+T+AK + G P+ V+ T+++A+ + TFGG P+ L+
Sbjct: 312 YEAYGVVPDIMTLAKPLAGGLPIGVVLVTEKVASAINYGDHGTTFGGGPLVCQAALTTLD 371
Query: 563 VIEEEGLQQNSKVVGEYFIRQLM 631
I++ G GE F +QL+
Sbjct: 372 KIQKPGFLAEVAKKGENF-KQLL 393
>04_04_1143 + 31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 96.7 bits (230), Expect = 1e-20
Identities = 51/142 (35%), Positives = 86/142 (60%), Gaps = 8/142 (5%)
Frame = +2
Query: 215 RVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETH 394
++AAF AE + GAGGV+ PK Y +K Q ++KK L++ADEV T FGR G F G + +
Sbjct: 715 KIAAFIAEPVMGAGGVIPPPKTYFEKVQAIVKKYDILFIADEVITAFGRLGTMF-GSDMY 773
Query: 395 GVKPDIVTMAKGIGNGF-PLAAVVTTKEIA-ANHAKA------AYFNTFGGNPMASTVGK 550
+KPD+V+MAK + + + P+ A++ + EI+ H+++ A+ T+ G+P+A V
Sbjct: 774 NIKPDLVSMAKALSSAYVPIGAIMVSPEISDVIHSQSNKLGSFAHGFTYSGHPVACAVAI 833
Query: 551 AVLEVIEEEGLQQNSKVVGEYF 616
L++ +E + + K + F
Sbjct: 834 EALKIYQERNIPDHVKQISPRF 855
Score = 91.1 bits (216), Expect = 7e-19
Identities = 50/141 (35%), Positives = 82/141 (58%), Gaps = 8/141 (5%)
Frame = +2
Query: 218 VAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHG 397
VAAF AE + GAGGV+ PK Y +K Q +++K L++ADEV TGFGR G F G + +
Sbjct: 225 VAAFIAEPVIGAGGVIPPPKTYFEKIQAVLQKYDVLFIADEVITGFGRLGTMF-GSDLYN 283
Query: 398 VKPDIVTMAKGIGNGF-PLAAVVTTKEIA----ANHAKAAYFN---TFGGNPMASTVGKA 553
+KPD+V++AK + + + P+ A + + EI+ + K +F T+ G+P++ V
Sbjct: 284 IKPDLVSLAKALSSAYVPIGATLVSPEISDVVHSQSNKIGFFAHGFTYSGHPVSCAVALE 343
Query: 554 VLEVIEEEGLQQNSKVVGEYF 616
L++ E + + K + F
Sbjct: 344 ALKIYRERNIPAHVKQISPRF 364
>02_01_0095 -
679597-679671,679775-679890,682241-682319,682446-682539,
682638-682716,682846-682933,683023-683106,683351-683398,
684044-684118,684274-684315,684347-684416,684551-684589,
685118-685191,686936-687028,687203-687300,688170-688236
Length = 406
Score = 94.7 bits (225), Expect = 5e-20
Identities = 55/167 (32%), Positives = 94/167 (56%), Gaps = 8/167 (4%)
Frame = +2
Query: 140 TGECISTDKYVHQLNELLGNSVPAGRVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNG 319
TG IS + ++N+ G ++AAF AE + GAGGV+ PK Y +K Q ++KK
Sbjct: 141 TGASISLSAFFDEINDFCGR-----QIAAFIAEPVIGAGGVILPPKTYFEKIQAVVKKYD 195
Query: 320 GLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGF-PLAAVVTTKEIA---AN 487
L++ DEV TGFGR G F G + + +KPD+V++AK + + + P+ A++ + EI+ +
Sbjct: 196 ILFIVDEVITGFGRLGTMF-GSDLYNIKPDLVSLAKALSSAYAPIGAILVSPEISDVIHS 254
Query: 488 HAKA----AYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYF 616
H+ A+ T+ G+P++ V L++ E + + V + F
Sbjct: 255 HSNKLGTFAHGFTYSGHPVSCAVALEALKIYRERDIPGHVTHVAQRF 301
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/141 (34%), Positives = 82/141 (58%), Gaps = 8/141 (5%)
Frame = +2
Query: 218 VAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHG 397
+AAF AE + GAGGV+ PK Y +K Q ++KK L +ADEV T FGR G F G + +
Sbjct: 311 IAAFIAEPVMGAGGVIPPPKTYFEKIQAVLKKYDILLIADEVITAFGRLGTMF-GCDMYD 369
Query: 398 VKPDIVTMAKGIGNGF-PLAAVVTTKEIA------ANH-AKAAYFNTFGGNPMASTVGKA 553
+KPD+V++AK + + + P+ A++ + EI +N A+ T+ G+P++ V
Sbjct: 370 IKPDLVSIAKALSSAYMPIGAILVSPEITDVIYSQSNKLGSFAHGFTYSGHPVSCAVAIE 429
Query: 554 VLEVIEEEGLQQNSKVVGEYF 616
L++ +E + ++ + + F
Sbjct: 430 ALKIYKERNIIEHVQKIAPRF 450
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 74.9 bits (176), Expect = 5e-14
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 8/204 (3%)
Frame = +2
Query: 47 GFYHAVHPDPF--RGAFGGCRDSISQAPG-SCSCTGECISTD-KYVHQLNELLGNSVPAG 214
G YH H D F + G + +PG T E ++ V + +L + G
Sbjct: 193 GCYHG-HADSFLVKAGSGVATLGLPDSPGVPKGATSETLTAPYNDVEAVKKLFEEN--KG 249
Query: 215 RVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETH 394
++AA F E + G G + G+L ++L K++G L V DEV TGF + E
Sbjct: 250 QIAAVFLEPVVGNAGFIPPQPGFLNALRDLTKQDGALLVFDEVMTGFRLA--YGGAQEYF 307
Query: 395 GVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAA---YFNTFGGNPMASTVGKAVLEV 565
G+ PD+ T+ K IG G P+ A K+I A A T GNP+A T G L+
Sbjct: 308 GITPDVSTLGKIIGGGLPVGAYGGRKDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR 367
Query: 566 IEEEGLQQN-SKVVGEYFIRQLMD 634
+ E G K+ G+ +R ++D
Sbjct: 368 LMEPGTYDYLDKITGD-LVRGVLD 390
>10_04_0016 +
7601796-7601999,7602495-7602543,7603140-7603165,
7603334-7603339,7603496-7603570,7603880-7603933
Length = 137
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 215 RVAAFFAESIQGAGGVVQFPKGYLKK 292
++AAF AE + GAGGV+ PK Y +K
Sbjct: 95 QIAAFIAEPVMGAGGVIAPPKTYFEK 120
>04_04_0012 + 22145111-22146388
Length = 425
Score = 33.1 bits (72), Expect = 0.19
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 51 STTQSTLILSEA--LSEAAGTLSRKLQDPARAPESASALTNMSTNLTSY*VTQFRPAE*R 224
+TT+S EA SE+ L R LQDP+ + E+ TNLT+Y + R E R
Sbjct: 11 ATTESIAKAQEAKDASESISILYRVLQDPSSSAEALRTKELAITNLTNYLTKENRAEELR 70
Query: 225 HSLR--NPFRVLVESCNSLR 278
+ L PF L+ + +
Sbjct: 71 NLLTQLRPFFSLIPKAKTAK 90
>05_06_0181 - 26178006-26178836
Length = 276
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 427 LSHRHDVGLHAVRLEAPEMISSATEACLYLISYIQATILLDQ 302
L HRHD G+ AVR +AP+++ + + I T+ L Q
Sbjct: 87 LRHRHDNGITAVRKQAPQLLRQGRKLKTMELGGITGTVFLGQ 128
>07_03_1197 +
24719746-24720081,24721726-24721976,24722065-24722233,
24722339-24722683
Length = 366
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 23 RMAIPVPPGF-YHAVHPDPFRGAFGGCRDSISQAPGSCSCTGECISTDKYVHQLNE 187
+ I VP GF Y + D G IS +C C G +S KY++ +++
Sbjct: 54 KKTIRVPEGFDYELYNRDDINRILGPRASCISFKDSACRCFGYMVSKKKYIYTIDD 109
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 29.9 bits (64), Expect = 1.8
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Frame = -3
Query: 453 ARGNPLPIPLAIVTMSGFTPCVSKPQ---K*SPVRPKPVCTSSATYKPPFFLINS*AFFR 283
A P P P A +P + P SP+ P P T+S PP + +
Sbjct: 161 ASSPPSPAPAAATPSLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAAMAPSPST 220
Query: 282 YPLGNCTTPPAP*MDSAKNAATLPA 208
P G PP P D A AT PA
Sbjct: 221 TPGGVAQPPPPPGTDGAN--ATTPA 243
>04_04_1193 +
31634043-31634349,31634685-31634847,31635048-31636622,
31636653-31637541,31639401-31641266
Length = 1599
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Frame = +2
Query: 275 KGYLKKAQELIKKNGGLYVADEVQTGF----GRTGDHF 376
+G+++K+ E +++ G Y+A+ V +GF RT +HF
Sbjct: 539 QGFVEKSSERLEQKGRKYLAELVDSGFYQHVERTSEHF 576
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 8 ATQSYRMAIPVPPGFYHAVHPDPFRGAFGG 97
A+ S + P+PP +YH +P P+ +GG
Sbjct: 399 ASSSSGQSYPMPPQYYHGQYP-PYYPPYGG 427
>04_01_0085 -
932461-932464,932656-933002,933387-935041,935084-935882,
936693-936707
Length = 939
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 130 GSWSLRDRVPAASESASERIRVDCVVETWRDG 35
G WSL R+PA ++ + +VDC E W DG
Sbjct: 876 GCWSLT-RLPAVGLDSTRKPKVDCEKEWW-DG 905
>04_01_0084 - 912255-912368,912738-912822,914050-917105,920290-920508
Length = 1157
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 130 GSWSLRDRVPAASESASERIRVDCVVETWRDG 35
G WSL R+PA ++ + +VDC E W DG
Sbjct: 1029 GCWSLT-RLPAVGLDSTRKPKVDCEKEWW-DG 1058
>10_06_0028 -
9802362-9802475,9802919-9803090,9803167-9803208,
9803344-9804011,9804098-9804418,9804495-9804833,
9804856-9805109,9805300-9805510
Length = 706
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 439 VADPLSHRHDVGLHAVRLEAPEMISSATEACLYLISYIQATILLDQLLS 293
+ D L R GLH V L++ E IS+ E +I +LD LLS
Sbjct: 649 IKDCLFARQRQGLHYVCLQSTEKISTIPEINFDIIREEITQFILDDLLS 697
>08_01_0692 + 6121443-6122266,6122812-6124798
Length = 936
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 155 STDKYVHQLNELLGNSVPAGRVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVA 334
S +Y+H++ L NS + R+ FF I+ G P Y + + E++KK GGL +A
Sbjct: 320 SNHQYIHRMKPL--NSEDSKRL--FFKRVIRSKDGC---PSQYEEVSAEILKKCGGLPLA 372
>04_03_0482 - 16440489-16440734,16441613-16441652,16442378-16442406
Length = 104
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 465 VTTAARGNPLPIPLAIVTMSGFTPCVSKPQ 376
VTT R + L P+A+V++ G++P PQ
Sbjct: 25 VTTGMRASGLQDPVALVSIGGWSPNQGAPQ 54
>04_03_0199 -
12559351-12559433,12559693-12559827,12560260-12560437,
12560848-12561389,12561398-12564827
Length = 1455
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +2
Query: 275 KGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIV 415
+G+++K+ E + G Y+ + V +GF + + +W V D++
Sbjct: 360 QGFVEKSSEKFEHKGWEYLTELVNSGFFQQAESWWSSSVVFVMHDLM 406
>04_03_0153 +
11919769-11919880,11920190-11920488,11921909-11922024,
11922113-11922248,11922959-11923006,11924130-11924228,
11924317-11924385,11924465-11924599,11924687-11924755,
11925221-11925276,11925465-11925624,11926534-11926698,
11927484-11927568,11927646-11927849,11928396-11928487,
11928571-11928613,11930727-11930884,11931520-11931630,
11931947-11932012,11933716-11933784,11934181-11934255,
11934330-11934506,11934598-11934683,11936259-11936313,
11936901-11936939,11938105-11938230,11938319-11938432,
11939208-11939265,11939485-11939623,11939698-11939783,
11939842-11940041
Length = 1148
Score = 27.5 bits (58), Expect = 9.4
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Frame = +2
Query: 20 YRMAIPVPPGFYHAVHPDPFRGAFGGCRDSISQAPGSCSCTGECISTDKYVHQLNELLGN 199
++ IP+PP F H RG R S + + +C + N+ +
Sbjct: 57 HKSGIPLPPNFLHRRDLVRARGILPVRRSSARSSTTALTCPAAAGDPNSLA---NDRKRD 113
Query: 200 SVPAGRVAAFFAESIQGA--GGVVQFPKGY---LKKAQELIKKNGGLYVADEV--QTGFG 358
++P VA + + + + F +G+ +K QEL ++ GL V + TG G
Sbjct: 114 AIPKQPVAPSSTQLARHSPVPSIASFDRGFYLLVKAIQELRERKDGLVVTVGIGGPTGSG 173
Query: 359 RT 364
+T
Sbjct: 174 KT 175
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,773,146
Number of Sequences: 37544
Number of extensions: 443400
Number of successful extensions: 1527
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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