BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11c19
(635 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 26 1.1
AJ302660-1|CAC35525.1| 195|Anopheles gambiae hypothetical prote... 25 1.5
EF989011-1|ABS17666.1| 399|Anopheles gambiae serpin 7 protein. 24 3.5
AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein. 24 3.5
DQ974168-1|ABJ52808.1| 447|Anopheles gambiae serpin 9 protein. 23 6.1
AJ438610-6|CAD27478.1| 226|Anopheles gambiae hypothetical prote... 23 6.1
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 23 8.1
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 25.8 bits (54), Expect = 1.1
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = +2
Query: 317 GGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIG----NGFP 448
GG+ V+D + +GD W ++ H + T G G NG+P
Sbjct: 921 GGMMVSDTINNN--SSGDGRWTYQQHHTVKTVTTQGGGGGAGTTNGYP 966
>AJ302660-1|CAC35525.1| 195|Anopheles gambiae hypothetical protein
protein.
Length = 195
Score = 25.4 bits (53), Expect = 1.5
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +3
Query: 27 WPFPSLQVSTTQSTLILSEALSEAAGTLSRKLQDPARAPESASALTNMSTNLTS 188
W FP+L +TT A S A S +++ L + TN+T+
Sbjct: 32 WSFPALSPTTTTLATTSGTAASSGASNSSNVSVAIGNRVNTSTGLDDYGTNITN 85
>EF989011-1|ABS17666.1| 399|Anopheles gambiae serpin 7 protein.
Length = 399
Score = 24.2 bits (50), Expect = 3.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 69 LILSEALSEAAGTLSRKLQDPARA 140
L +S AL ++ G LS++L+D ARA
Sbjct: 120 LNVSFALLQSEGQLSQELEDAARA 143
>AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein.
Length = 441
Score = 24.2 bits (50), Expect = 3.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 286 QVSLRELHDSTSTLNGFRKECRYSAGRN*VT 194
Q L H T +NG R+ RY+ G N +T
Sbjct: 78 QFLLNIYHKFTEEMNGGRRRKRYADGANLLT 108
>DQ974168-1|ABJ52808.1| 447|Anopheles gambiae serpin 9 protein.
Length = 447
Score = 23.4 bits (48), Expect = 6.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 5 TATQSYRMAIPVPPGFYHAVHPDPF 79
T S+R + P P +H HP F
Sbjct: 403 TVAFSFRSSRPADPAMFHCNHPFVF 427
>AJ438610-6|CAD27478.1| 226|Anopheles gambiae hypothetical protein
protein.
Length = 226
Score = 23.4 bits (48), Expect = 6.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 633 SINCLMKYSPTTLLFCCSPSSSITS 559
+++CL K SPT + C P S T+
Sbjct: 147 NLDCLSKCSPTKCVPFCRPFSGQTA 171
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 23.0 bits (47), Expect = 8.1
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 84 ALSEAAGTLSRKLQD-PARAPESASALTNMSTNLT 185
AL EA GT+ R LQD A+ + N S +T
Sbjct: 379 ALKEAYGTVRRTLQDVQAKQAAIERGMRNASERVT 413
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,579
Number of Sequences: 2352
Number of extensions: 14730
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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