Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11c19
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 246 8e-66
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 133 1e-31
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 109 2e-24
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 109 2e-24
Z69664-4|CAA93517.1| 483|Caenorhabditis elegans Hypothetical pr... 63 1e-10
Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical p... 31 0.69
Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z83316-6|CAD30429.2| 491|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical p... 30 1.2
AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical ... 30 1.2
AL022473-1|CAJ43448.1| 339|Caenorhabditis elegans Hypothetical ... 30 1.2
AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear recep... 30 1.2
Z75711-10|CAK55176.1| 400|Caenorhabditis elegans Hypothetical p... 29 3.7
Z75711-9|CAK55175.1| 331|Caenorhabditis elegans Hypothetical pr... 29 3.7
U61947-8|AAB03133.1| 64|Caenorhabditis elegans Hypothetical pr... 29 3.7
DQ185512-1|ABA28304.1| 400|Caenorhabditis elegans AXL-1 protein. 29 3.7
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81496-11|CAB04069.2| 448|Caenorhabditis elegans Hypothetical p... 28 6.4
Z49911-5|CAA90128.1| 431|Caenorhabditis elegans Hypothetical pr... 28 6.4
U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protea... 28 6.4
U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protea... 28 6.4
U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protea... 28 6.4
L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-lik... 28 6.4
L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-lik... 28 6.4
AY204204-1|AAO39205.1| 448|Caenorhabditis elegans nuclear recep... 28 6.4
Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical pr... 27 8.5
AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich ... 27 8.5
AC006832-7|AAF39999.1| 505|Caenorhabditis elegans Hypothetical ... 27 8.5
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 246 bits (603), Expect = 8e-66
Identities = 121/203 (59%), Positives = 150/203 (73%), Gaps = 7/203 (3%)
Frame = +2
Query: 41 PPGF--YHAVHPDPFRGAFGG--CRDSISQAPG-SCSCT-GECISTDKYVHQLNELLGNS 202
P GF + +++ DP+RG FGG CRDS Q C C G C ++DKY+ Q +++L +
Sbjct: 155 PHGFNIFKSLNADPYRGIFGGSNCRDSPIQVKNRKCDCKPGSCQASDKYIEQFDDMLLHD 214
Query: 203 VP-AGRVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFW 379
+ AAF ESIQG GG VQ+P GYLKK+ E ++K GGL +ADEVQTGFGR G HFW
Sbjct: 215 FSHSSGPAAFLIESIQGVGGTVQYPHGYLKKSYESVQKRGGLAIADEVQTGFGRLGSHFW 274
Query: 380 GFETHGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVL 559
GFE+ PD+VTMAKGIGNGFPL AVVT+KEIA + K+ YFNT+GGNP+AS VGKAVL
Sbjct: 275 GFESQDALPDMVTMAKGIGNGFPLGAVVTSKEIADSFNKSLYFNTYGGNPLASVVGKAVL 334
Query: 560 EVIEEEGLQQNSKVVGEYFIRQL 628
EVIEEE LQ+NS VVG+YF++QL
Sbjct: 335 EVIEEEKLQENSAVVGDYFLKQL 357
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 133 bits (321), Expect = 1e-31
Identities = 65/134 (48%), Positives = 91/134 (67%), Gaps = 3/134 (2%)
Frame = +2
Query: 218 VAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETH- 394
VAA+FAE++Q GG V PK Y K ++ +GGL + DEVQTGFGR G +W + +
Sbjct: 236 VAAYFAEALQSCGGQVIPPKDYFKDVATHVRNHGGLMIIDEVQTGFGRIGRKYWAHQLYD 295
Query: 395 -GVKPDIVTMAKGIGNGFPLAAVVTTKEIA-ANHAKAAYFNTFGGNPMASTVGKAVLEVI 568
G PDIVTM K +GNGFP++AV T KEIA A + YFNT+GGNP+A +V++V+
Sbjct: 296 DGFLPDIVTMGKPMGNGFPVSAVATRKEIADALGGEVGYFNTYGGNPVACAAVISVMKVV 355
Query: 569 EEEGLQQNSKVVGE 610
++E L ++S+ +GE
Sbjct: 356 KDENLLEHSQQMGE 369
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 109 bits (262), Expect = 2e-24
Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 2/176 (1%)
Frame = +2
Query: 107 SISQAPGSCSCTGECISTDKYVHQLN-ELLGNSVPAGRVAAFFAESIQGAGGVVQFPKGY 283
S S P S + G + K V N + + +++ VAAF E IQG GVV GY
Sbjct: 167 SASTDPDSFARFGPFVPGFKTVPYNNLKAVEDAIKDKNVAAFMVEPIQGEAGVVLPDPGY 226
Query: 284 LKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGF-PLAAV 460
LK +L KK L++ DEVQ+G GR+G + + V+PDIV + K + GF P++AV
Sbjct: 227 LKGVSDLCKKYNVLFITDEVQSGLGRSGKLLAHYHDN-VRPDIVVLGKALSGGFYPVSAV 285
Query: 461 VTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQL 628
+ + N + +T+GGNP+A V A LE+++EE L +NS V+G+ + +L
Sbjct: 286 LCDDNVMMNIKPGEHGSTYGGNPLACKVAIAALEILQEEKLVENSAVMGDLLMSKL 341
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 109 bits (262), Expect = 2e-24
Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 2/176 (1%)
Frame = +2
Query: 107 SISQAPGSCSCTGECISTDKYVHQLN-ELLGNSVPAGRVAAFFAESIQGAGGVVQFPKGY 283
S S P S + G + K V N + + +++ VAAF E IQG GVV GY
Sbjct: 102 SASTDPDSFARFGPFVPGFKTVPYNNLKAVEDAIKDKNVAAFMVEPIQGEAGVVLPDPGY 161
Query: 284 LKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGF-PLAAV 460
LK +L KK L++ DEVQ+G GR+G + + V+PDIV + K + GF P++AV
Sbjct: 162 LKGVSDLCKKYNVLFITDEVQSGLGRSGKLLAHYHDN-VRPDIVVLGKALSGGFYPVSAV 220
Query: 461 VTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQL 628
+ + N + +T+GGNP+A V A LE+++EE L +NS V+G+ + +L
Sbjct: 221 LCDDNVMMNIKPGEHGSTYGGNPLACKVAIAALEILQEEKLVENSAVMGDLLMSKL 276
>Z69664-4|CAA93517.1| 483|Caenorhabditis elegans Hypothetical
protein K04D7.3 protein.
Length = 483
Score = 63.3 bits (147), Expect = 1e-10
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +2
Query: 218 VAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHG 397
VAA E IQ GG + + +++ K+G +++ DEVQTG G TGD W +
Sbjct: 271 VAAIIVEPIQAEGGDHYGSPAFFQGLRDITSKHGIVFIVDEVQTGGGATGD-IWAHDHWN 329
Query: 398 VK--PDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIE 571
+ PD+VT +K + G + + A Y NT+ G+P + + +EVI+
Sbjct: 330 LSSPPDMVTFSKKLLTG----GYFYGEHLRVKEAYRIY-NTWMGDPTKLLLLEKAVEVIK 384
Query: 572 EEGLQQNSKVVGEYFIRQL 628
+GL + S+ VG F ++L
Sbjct: 385 RDGLIEQSREVGAEFQKRL 403
>Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3
Query: 456 AARGNPLPIPLAIVTMSGFTPCVSKPQK*SPVRPKPVCTSSATYKPPFFLINS 298
A NP P+P A S F P ++ + +P +P +SA +PP NS
Sbjct: 230 APEANPAPVPTA-TKPSPFAPAIAPLRDGAPAQPPAPIQASAPLRPPVAKQNS 281
>Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3
Query: 456 AARGNPLPIPLAIVTMSGFTPCVSKPQK*SPVRPKPVCTSSATYKPPFFLINS 298
A NP P+P A S F P ++ + +P +P +SA +PP NS
Sbjct: 230 APEANPAPVPTA-TKPSPFAPAIAPLRDGAPAQPPAPIQASAPLRPPVAKQNS 281
>Z83316-6|CAD30429.2| 491|Caenorhabditis elegans Hypothetical
protein B0379.4b protein.
Length = 491
Score = 30.7 bits (66), Expect = 0.91
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 435 PIPLAIVTMSGFTPCVSKPQK*SPVRPKPVCTSSATYKPP 316
P P+ T++GFTP S PQ P P T + PP
Sbjct: 87 PNPVGRSTINGFTPSTSSPQNGLRYPPFPQNTPESVMSPP 126
>Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 298 LSFLQVSLRELHDSTSTLNGFRKECRYSAGR 206
L F+Q SL+ L D L+GFR E Y A R
Sbjct: 171 LHFVQPSLQNLLDEPELLDGFRSEMSYRATR 201
>AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 298 LSFLQVSLRELHDSTSTLNGFRKECRYSAGR 206
L F+Q SL+ L D L+GFR E Y A R
Sbjct: 171 LHFVQPSLQNLLDEPELLDGFRSEMSYRATR 201
>AL022473-1|CAJ43448.1| 339|Caenorhabditis elegans Hypothetical
protein H27C11.1b protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 298 LSFLQVSLRELHDSTSTLNGFRKECRYSAGR 206
L F+Q SL+ L D L+GFR E Y A R
Sbjct: 71 LHFVQPSLQNLLDEPELLDGFRSEMSYRATR 101
>AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear receptor
NHR-97 protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 298 LSFLQVSLRELHDSTSTLNGFRKECRYSAGR 206
L F+Q SL+ L D L+GFR E Y A R
Sbjct: 171 LHFVQPSLQNLLDEPELLDGFRSEMSYRATR 201
>Z75711-10|CAK55176.1| 400|Caenorhabditis elegans Hypothetical
protein K02B12.4b protein.
Length = 400
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 284 LKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHG 397
L K E + K VA +GFG FW FE +G
Sbjct: 236 LPKRFESLYKKKRQQVATSDSSGFGSNASDFWSFERYG 273
>Z75711-9|CAK55175.1| 331|Caenorhabditis elegans Hypothetical
protein K02B12.4a protein.
Length = 331
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 284 LKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHG 397
L K E + K VA +GFG FW FE +G
Sbjct: 167 LPKRFESLYKKKRQQVATSDSSGFGSNASDFWSFERYG 204
>U61947-8|AAB03133.1| 64|Caenorhabditis elegans Hypothetical
protein C06G3.3 protein.
Length = 64
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/40 (22%), Positives = 19/40 (47%)
Frame = -3
Query: 240 DSAKNAATLPAGTELPNSSLSWWTYLSVLMHSPVHEQDPG 121
+S N+ P+ E+P WW ++ H+ + ++ G
Sbjct: 24 ESPSNSPVSPSPQEVPRGKKEWWLPFNIPFHNEIFRKNSG 63
>DQ185512-1|ABA28304.1| 400|Caenorhabditis elegans AXL-1 protein.
Length = 400
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 284 LKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHG 397
L K E + K VA +GFG FW FE +G
Sbjct: 236 LPKRFESLYKKKRQQVATSDSSGFGSNASDFWSFERYG 273
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical
protein F55H12.3 protein.
Length = 2972
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = -2
Query: 430 PLSHRHDVGLHAVRLEAPEMISSATEACLYLISYIQATILLDQLLSFLQVSLRELHDSTS 251
P S DV L LE E IS +TE C+ T+ ++ +++ S E +ST
Sbjct: 506 PGSESVDVFLIDSDLEI-EWISKSTETCM---EGEFRTLTVNMIMTSSSNSAAEHFESTW 561
Query: 250 TLNGFRKEC 224
+ GFRK C
Sbjct: 562 NVQGFRKSC 570
>Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical
protein C18D1.1 protein.
Length = 645
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 165 LSVLMHSPVHEQDPGACEIESLQPPKAPLKGSG 67
+ ++ SP+H+Q G + E L P KGSG
Sbjct: 270 IPLMFQSPLHQQFAGMQDFEPLSALSTPNKGSG 302
>Z81496-11|CAB04069.2| 448|Caenorhabditis elegans Hypothetical
protein F09C6.9 protein.
Length = 448
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 213 PAGTELPNSSLSWWTYLSVLMHSPVHEQDPGACEIESL 100
P E+ + S TY S+L S V E+D C+I +L
Sbjct: 119 PGAMEVDEKAASSSTYKSLLKRSKVKEEDQDDCQIIAL 156
>Z49911-5|CAA90128.1| 431|Caenorhabditis elegans Hypothetical
protein M28.6 protein.
Length = 431
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 374 FW-GFETHGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAK 496
+W GF THG + MA +G T+EIAA+H K
Sbjct: 129 YWPGFGTHGRDNVTINMALSHMSGMAWFDTPITEEIAADHEK 170
>U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protease
related protein6, isoform b protein.
Length = 378
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 368 DHFWGFETHGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFG 520
D F+G +GVK D+ + K + PL E N+ Y +T G
Sbjct: 248 DKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEVYEDFLNYDGGVYVHTGG 298
>U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protease
related protein6, isoform c protein.
Length = 369
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 368 DHFWGFETHGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFG 520
D F+G +GVK D+ + K + PL E N+ Y +T G
Sbjct: 239 DKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEVYEDFLNYDGGVYVHTGG 289
>U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protease
related protein6, isoform a protein.
Length = 379
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 368 DHFWGFETHGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFG 520
D F+G +GVK D+ + K + PL E N+ Y +T G
Sbjct: 249 DKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEVYEDFLNYDGGVYVHTGG 299
>L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 368 DHFWGFETHGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFG 520
D F+G +GVK D+ + K + PL E N+ Y +T G
Sbjct: 249 DKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEVYEDFLNYDGGVYVHTGG 299
>L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 368 DHFWGFETHGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFG 520
D F+G +GVK D+ + K + PL E N+ Y +T G
Sbjct: 249 DKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEVYEDFLNYDGGVYVHTGG 299
>AY204204-1|AAO39205.1| 448|Caenorhabditis elegans nuclear receptor
NHR-116 protein.
Length = 448
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 213 PAGTELPNSSLSWWTYLSVLMHSPVHEQDPGACEIESL 100
P E+ + S TY S+L S V E+D C+I +L
Sbjct: 119 PGAMEVDEKAASSSTYKSLLKRSKVKEEDQDDCQIIAL 156
>Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical
protein C50H2.1 protein.
Length = 929
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -2
Query: 613 VFADYLTVLLQSFFFNNLQYSFSNSRSHRVSTESVKVGSLRVIGCYLFS 467
VFA L ++ S F + S++ +S R S KVG L +IG +LF+
Sbjct: 518 VFASELGII--SMFLIAFEMSYNTRQSFRGRRLSPKVGVLLMIGGWLFA 564
>AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich
repeat-containingG protein-coupled receptor protein.
Length = 929
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -2
Query: 613 VFADYLTVLLQSFFFNNLQYSFSNSRSHRVSTESVKVGSLRVIGCYLFS 467
VFA L ++ S F + S++ +S R S KVG L +IG +LF+
Sbjct: 518 VFASELGII--SMFLIAFEMSYNTRQSFRGRRLSPKVGVLLMIGGWLFA 564
>AC006832-7|AAF39999.1| 505|Caenorhabditis elegans Hypothetical
protein ZK355.5 protein.
Length = 505
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = +2
Query: 89 FGGCRDSIS-QAPGS---CSCTGECISTDKYVHQLN 184
FGG RD ++ Q G+ C C G+ I+TD + N
Sbjct: 171 FGGVRDMVTLQVSGNLRDCGCRGDFITTDNILEYQN 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,674,924
Number of Sequences: 27780
Number of extensions: 321761
Number of successful extensions: 1067
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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