BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11c10
(705 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-3029|AAN09550.1| 1240|Drosophila melanogaster CG32506-P... 30 3.5
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 30 3.5
X54648-2|CAA38461.1| 415|Drosophila melanogaster frizzled (clon... 29 4.7
X54648-1|CAA38460.1| 581|Drosophila melanogaster frizzled (clon... 29 4.7
X54647-1|CAA38459.1| 415|Drosophila melanogaster frizzled protein. 29 4.7
X54646-1|CAA38458.1| 581|Drosophila melanogaster frizzled protein. 29 4.7
BT022175-1|AAY51569.1| 587|Drosophila melanogaster IP01257p pro... 29 4.7
AY051808-1|AAK93232.1| 581|Drosophila melanogaster LD32066p pro... 29 4.7
AE014297-2411|AAF55470.2| 587|Drosophila melanogaster CG17803-P... 29 4.7
AE014296-2378|AAN11810.1| 415|Drosophila melanogaster CG17697-P... 29 4.7
AE014296-2377|AAF49746.3| 581|Drosophila melanogaster CG17697-P... 29 4.7
AE014297-4720|AAF57130.2| 357|Drosophila melanogaster CG15561-P... 29 6.2
AY069413-1|AAL39558.1| 420|Drosophila melanogaster LD11027p pro... 29 8.1
AE014134-543|AAN10406.1| 420|Drosophila melanogaster CG17257-PB... 29 8.1
AE014134-542|AAF51157.2| 420|Drosophila melanogaster CG17257-PA... 29 8.1
>AE014298-3029|AAN09550.1| 1240|Drosophila melanogaster CG32506-PA
protein.
Length = 1240
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 407 PQNERASTDTHQIDDPIHVISMPDEETMQQKPPDYDTVAGAPPTYDDAIKL 559
P+ + STD+ +D+ + + PDEE +QK + ++ + D KL
Sbjct: 836 PRAMKTSTDSGHVDESFNELDEPDEEDNKQKQQQDEKISESESKLPDYRKL 886
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 29.9 bits (64), Expect = 3.5
Identities = 34/94 (36%), Positives = 45/94 (47%)
Frame = -1
Query: 549 ASSYVGGAPATVS*SGGFCCIVSSSGIDIT*MGSSI*CVSVEARSFCGCLAGDCSQQHIA 370
+SSY GAPA+ S F SS G T GSS S + SF G + +
Sbjct: 821 SSSY--GAPASGP-SPSFSAPSSSYGAPSTGSGSS--SFSSSSSSFSGASSSS------S 869
Query: 369 AQMSSAPATMHATPTYRTGSA*SSARPSQLISAP 268
A SAP++ + P+ +G + SSA PS SAP
Sbjct: 870 AGYPSAPSSSYGAPSTGSGHSFSSA-PSSSYSAP 902
>X54648-2|CAA38461.1| 415|Drosophila melanogaster frizzled (clone
BE2) protein.
Length = 415
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 342 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 217
+ A+P YR+G ++ ++L P HN P +C +P
Sbjct: 24 LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65
>X54648-1|CAA38460.1| 581|Drosophila melanogaster frizzled (clone
AC2) protein.
Length = 581
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 342 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 217
+ A+P YR+G ++ ++L P HN P +C +P
Sbjct: 24 LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65
>X54647-1|CAA38459.1| 415|Drosophila melanogaster frizzled protein.
Length = 415
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 342 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 217
+ A+P YR+G ++ ++L P HN P +C +P
Sbjct: 24 LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65
>X54646-1|CAA38458.1| 581|Drosophila melanogaster frizzled protein.
Length = 581
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 342 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 217
+ A+P YR+G ++ ++L P HN P +C +P
Sbjct: 24 LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65
>BT022175-1|AAY51569.1| 587|Drosophila melanogaster IP01257p
protein.
Length = 587
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = +1
Query: 454 HSRNINARRGDDATKAARLRHCGGSTANV*RRHQTESSATVAGVEQRARRVGPQSDARRR 633
++RNI+ R HC S AN RH+ E AG R R + + R
Sbjct: 365 YTRNIHVRALHKGEHPFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEGSSRH 424
Query: 634 TC 639
C
Sbjct: 425 YC 426
>AY051808-1|AAK93232.1| 581|Drosophila melanogaster LD32066p
protein.
Length = 581
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 342 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 217
+ A+P YR+G ++ ++L P HN P +C +P
Sbjct: 24 LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65
>AE014297-2411|AAF55470.2| 587|Drosophila melanogaster CG17803-PA
protein.
Length = 587
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = +1
Query: 454 HSRNINARRGDDATKAARLRHCGGSTANV*RRHQTESSATVAGVEQRARRVGPQSDARRR 633
++RNI+ R HC S AN RH+ E AG R R + + R
Sbjct: 365 YTRNIHVRALHKGEHPFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEGSSRH 424
Query: 634 TC 639
C
Sbjct: 425 YC 426
>AE014296-2378|AAN11810.1| 415|Drosophila melanogaster CG17697-PB,
isoform B protein.
Length = 415
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 342 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 217
+ A+P YR+G ++ ++L P HN P +C +P
Sbjct: 24 LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65
>AE014296-2377|AAF49746.3| 581|Drosophila melanogaster CG17697-PA,
isoform A protein.
Length = 581
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 342 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 217
+ A+P YR+G ++ ++L P HN P +C +P
Sbjct: 24 LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65
>AE014297-4720|AAF57130.2| 357|Drosophila melanogaster CG15561-PA
protein.
Length = 357
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 493 TKAARLRHCGGSTANV*RRHQTESSATVAGVEQRARRV 606
T A + CGG TA+ RH + S +A +EQ+ R +
Sbjct: 149 TDAELFKACGGRTAHKGARHGLKLSGKIARLEQQEREM 186
>AY069413-1|AAL39558.1| 420|Drosophila melanogaster LD11027p
protein.
Length = 420
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 266 HITTPCHTCMAFVIVCLRLMTC 201
HI C C+ F +VC RL+TC
Sbjct: 46 HILGCCCNCVDFDLVCTRLVTC 67
>AE014134-543|AAN10406.1| 420|Drosophila melanogaster CG17257-PB,
isoform B protein.
Length = 420
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 266 HITTPCHTCMAFVIVCLRLMTC 201
HI C C+ F +VC RL+TC
Sbjct: 46 HILGCCCNCVDFDLVCTRLVTC 67
>AE014134-542|AAF51157.2| 420|Drosophila melanogaster CG17257-PA,
isoform A protein.
Length = 420
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 266 HITTPCHTCMAFVIVCLRLMTC 201
HI C C+ F +VC RL+TC
Sbjct: 46 HILGCCCNCVDFDLVCTRLVTC 67
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,292,704
Number of Sequences: 53049
Number of extensions: 706373
Number of successful extensions: 2111
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2109
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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