Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11c07
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.6  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   6.6  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 86  KIIPLFKSGSTFDPSNFRPISVQFYSIK 169
           KII +   GS  DPS+     V FY ++
Sbjct: 235 KIIAVDPKGSILDPSSDSQNEVGFYEVE 262


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 53  CGVFLDLMKCSKIIPLFKSGSTFDPSNFRP 142
           C V +   K  +   ++ +   FDP NF P
Sbjct: 438 CTVVIGTFKLHRQPHIYPNPDVFDPDNFLP 467


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 142 HFSTILLNKKTIRIH*RSVNY*CKCRSY 225
           HF ++L N  +I+ H ++ N   K R Y
Sbjct: 464 HFESMLNNGVSIQSHAKAKNTMIKARQY 491


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 142 HFSTILLNKKTIRIH*RSVNY*CKCRSY 225
           HF ++L N  +I+ H ++ N   K R Y
Sbjct: 464 HFESMLNNGVSIQSHAKAKNTMIKARQY 491


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 142 HFSTILLNKKTIRIH*RSVNY*CKCRSY 225
           HF ++L N  +I+ H ++ N   K R Y
Sbjct: 90  HFESMLNNGVSIQSHAKAKNTMIKARQY 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,737
Number of Sequences: 438
Number of extensions: 3856
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)