Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11b23
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.23 
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    27   0.70 
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    25   2.1  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   3.7  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    24   4.9  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -2

Query: 306 EEWLRSRPQQGQNRRHDSHRCGRDSQLPPEHIHLRQQRPQGGEEKEE 166
           ++W + + QQ Q R+   HR     QL P     +QQ+ Q  +++++
Sbjct: 367 QQWQQQQQQQQQPRQSLPHRKQTQLQLSPRLQQQQQQQQQSQQQQQQ 413



 Score = 26.6 bits (56), Expect = 0.70
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = -2

Query: 294 RSRPQQGQNRRHDSHRCGRDSQLPPEHIHLRQQRPQGGEEKEEMRLYRQQ 145
           + RP+Q Q ++    +   +  +PP+   LRQQR Q   ++++ +  +Q+
Sbjct: 276 QQRPRQQQQQQQQQQQQQGERYVPPQ---LRQQRQQQQHQQQQQQQQQQR 322


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 661 CTSLARLGLRLSPCSGSDRSNS*RHCPSMLYR*GSCSA 548
           C      G   + C+G DRS+   HC +  +R  SC++
Sbjct: 291 CFRCLERGHTTADCAGEDRSSLCLHCGAADHRAASCTS 328


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 590 SLSKYAVSIRVVFRRYTSNVPGVQFQWHVYFSRFRD 483
           +L +YA+++ +V R+ T NVP   F   ++ +RF D
Sbjct: 123 TLFQYALAVALVHRKDTGNVPVPSF-LEMFPTRFVD 157


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +1

Query: 205 QMNVFGRQLGVTPAAMGIVTAILPLLW 285
           +MN F +QL +    +G++  +  ++W
Sbjct: 260 RMNFFIKQLAIADLCVGLLNVLTDIIW 286


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 493 LEKYTCHWNCT 525
           LE++ CHW C+
Sbjct: 91  LEQFHCHWGCS 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,711
Number of Sequences: 2352
Number of extensions: 14853
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)