Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11b21
(663 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 26 0.92
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 26 0.92
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 26 0.92
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 26 1.2
AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative transcri... 25 2.8
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 24 4.9
AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase... 24 4.9
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 6.5
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 23 6.5
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 8.6
CR954256-2|CAJ14143.1| 295|Anopheles gambiae cyclin protein. 23 8.6
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 26.2 bits (55), Expect = 0.92
Identities = 19/103 (18%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = +3
Query: 90 VRKQKERKQFTYKMNTQKCEQNKEAKEKTFVEKQAERMQRLRN--LHTARNEARTQNHQE 263
V K K T + +K ++ +A ++ VE + ++ RN + T + + E
Sbjct: 823 VTKNKLENLLTNNLFRRK-DELVQALQEISVEDRKRQLTNCRNEVVATEKRIKKVLTDTE 881
Query: 264 VVAEEARNKLPTNYEAKRRQAEWLVEDQKKREEAETEGKNYDR 392
V + L ++ W+ ++++ +E+ E +GK ++
Sbjct: 882 EVDRKLSEALKQQKTLQKELESWIQKEKEAQEKLEEDGKRMEK 924
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 26.2 bits (55), Expect = 0.92
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = +3
Query: 90 VRKQKERKQFTYKMNTQKCEQNKEAKEKTFVEKQAERMQRLRNLHTARNEARTQNHQEVV 269
+ ++KER+ + ++ ++ KE +EK EK+ Q+ R + + +E
Sbjct: 466 IEREKERE---LREQREREQREKEQREKEQREKEERERQQREKEQREREQREKEREREAA 522
Query: 270 AEEARNK 290
E R +
Sbjct: 523 RERERER 529
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 26.2 bits (55), Expect = 0.92
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 396 KLLNISAIEAERLE-RXXXXXNPDQGFSTYEHATIRQYNRLVK 521
KLLNI EAE LE + + F + + TI Q+ LVK
Sbjct: 1020 KLLNIDPEEAEELEGQFMFQIFNGERFFAFNNQTIEQFPSLVK 1062
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 25.8 bits (54), Expect = 1.2
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 198 RMQRLRNLHTARNEARTQNHQEVVAEEARNKLPTNYEAKRRQAEWL-VEDQKKREEA 365
R +RLR + RN AR Q+ AE P+ +RR+ L V ++R+ A
Sbjct: 1051 RQERLRRYNETRNAARRAATQQRQAERLPPPPPSPRTERRREVNRLAVARLRERQRA 1107
>AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative
transcription factor protein.
Length = 319
Score = 24.6 bits (51), Expect = 2.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 312 KRRQAEWLVEDQKKREEAETEGKNYDRVKLLNISAIEAERLER 440
K R+A+W + ++++E+ N KL+NI E+L +
Sbjct: 236 KNRRAKWRKQKREEQEQFSNYEINSKIRKLINIPVSAQEKLRQ 278
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 23.8 bits (49), Expect = 4.9
Identities = 16/70 (22%), Positives = 26/70 (37%)
Frame = +3
Query: 120 TYKMNTQKCEQNKEAKEKTFVEKQAERMQRLRNLHTARNEARTQNHQEVVAEEARNKLPT 299
T K T+ + KE + +E + + L A +E + H EV L
Sbjct: 454 TLKDETKVLLEEKEKLQTELIELKRAVDESKSALSIAESELKICQHDEVTERRKLESLRY 513
Query: 300 NYEAKRRQAE 329
+YE + E
Sbjct: 514 SYEETEKDLE 523
>AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase
subunit 1 protein.
Length = 688
Score = 23.8 bits (49), Expect = 4.9
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 483 EHATIRQYNRLVKNMPP--ADMERYEKQKQKY 572
E A ++Q NR+V ++PP +R ++Q+ Y
Sbjct: 166 EGAAVQQENRMVIDIPPNYTASDREDEQRMAY 197
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 23.4 bits (48), Expect = 6.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 113 FSFLLFSYKNDLHRLY 66
F+F LF Y HRLY
Sbjct: 361 FNFRLFKYAASAHRLY 376
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.4 bits (48), Expect = 6.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 528 PPADMERYEKQKQKYGEAFYGGP 596
P M R + Y A+YGGP
Sbjct: 9 PTDGMSRSSYTRSSYRSAYYGGP 31
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.0 bits (47), Expect = 8.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 562 SKSMVKHSMEAPTSS 606
SKS V+HSMEA S
Sbjct: 112 SKSFVRHSMEATAMS 126
>CR954256-2|CAJ14143.1| 295|Anopheles gambiae cyclin protein.
Length = 295
Score = 23.0 bits (47), Expect = 8.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 562 SKSMVKHSMEAPTSS 606
SKS V+HSMEA S
Sbjct: 112 SKSFVRHSMEATAMS 126
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,425
Number of Sequences: 2352
Number of extensions: 13202
Number of successful extensions: 65
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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