Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11b12
(702 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF244353-1|AAF82476.1| 117|Drosophila melanogaster 4E-binding p... 119 4e-27
AF132557-1|AAD27856.1| 117|Drosophila melanogaster HL08053p pro... 119 4e-27
AE014134-614|AAF51100.1| 117|Drosophila melanogaster CG8846-PA ... 119 4e-27
AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein. 31 1.1
AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-P... 31 1.1
AF132162-1|AAD34750.1| 1219|Drosophila melanogaster unknown prot... 31 2.0
AE014296-2195|AAF49877.1| 1219|Drosophila melanogaster CG11006-P... 31 2.0
AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-P... 31 2.0
AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-P... 31 2.0
AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-P... 31 2.0
AY069316-1|AAL39461.1| 303|Drosophila melanogaster LD03052p pro... 30 3.5
AE014298-2564|AAO41692.1| 303|Drosophila melanogaster CG5445-PD... 30 3.5
AE014298-2563|AAN09441.1| 303|Drosophila melanogaster CG5445-PC... 30 3.5
AE014298-2562|AAF48724.1| 303|Drosophila melanogaster CG5445-PB... 30 3.5
AE014298-2561|AAF48723.1| 303|Drosophila melanogaster CG5445-PA... 30 3.5
AE014298-2111|AAF48430.1| 858|Drosophila melanogaster CG15028-P... 30 3.5
AE014298-2110|AAN09656.1| 968|Drosophila melanogaster CG15028-P... 30 3.5
AE014134-2102|AAF53125.2| 371|Drosophila melanogaster CG31757-P... 30 3.5
AY084186-1|AAL89924.1| 834|Drosophila melanogaster RE69157p pro... 29 4.6
L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding pr... 29 6.1
AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p pro... 29 6.1
AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA... 29 6.1
BT025853-1|ABF85753.1| 1471|Drosophila melanogaster IP15211p pro... 29 8.1
>AF244353-1|AAF82476.1| 117|Drosophila melanogaster 4E-binding
protein THOR protein.
Length = 117
Score = 119 bits (286), Expect = 4e-27
Identities = 62/119 (52%), Positives = 83/119 (69%), Gaps = 4/119 (3%)
Frame = +3
Query: 84 MSASPIARQATHSQSIP--SRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFM 257
MSASP ARQA +Q++P +R+V+I+DP QMP+VYSSTPGGT+YSTTPGGT+++YER+FM
Sbjct: 1 MSASPTARQAI-TQALPMITRKVVISDPIQMPEVYSSTPGGTLYSTTPGGTKLIYERAFM 59
Query: 258 LSLRQSPISQTPPQCALPAALLKNPSSVP--NAQPASTQKPRSNSISFDESQETFSMDL 428
+LR SP+SQTPP +P+ LL+ P P T+ + E QE F +DL
Sbjct: 60 KNLRGSPLSQTPPS-NVPSCLLRGTPRTPFRKCVPVPTELIKQTKSLKIEDQEQFQLDL 117
>AF132557-1|AAD27856.1| 117|Drosophila melanogaster HL08053p
protein.
Length = 117
Score = 119 bits (286), Expect = 4e-27
Identities = 62/119 (52%), Positives = 83/119 (69%), Gaps = 4/119 (3%)
Frame = +3
Query: 84 MSASPIARQATHSQSIP--SRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFM 257
MSASP ARQA +Q++P +R+V+I+DP QMP+VYSSTPGGT+YSTTPGGT+++YER+FM
Sbjct: 1 MSASPTARQAI-TQALPMITRKVVISDPIQMPEVYSSTPGGTLYSTTPGGTKLIYERAFM 59
Query: 258 LSLRQSPISQTPPQCALPAALLKNPSSVP--NAQPASTQKPRSNSISFDESQETFSMDL 428
+LR SP+SQTPP +P+ LL+ P P T+ + E QE F +DL
Sbjct: 60 KNLRGSPLSQTPPS-NVPSCLLRGTPRTPFRKCVPVPTELIKQTKSLKIEDQEQFQLDL 117
>AE014134-614|AAF51100.1| 117|Drosophila melanogaster CG8846-PA
protein.
Length = 117
Score = 119 bits (286), Expect = 4e-27
Identities = 62/119 (52%), Positives = 83/119 (69%), Gaps = 4/119 (3%)
Frame = +3
Query: 84 MSASPIARQATHSQSIP--SRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFM 257
MSASP ARQA +Q++P +R+V+I+DP QMP+VYSSTPGGT+YSTTPGGT+++YER+FM
Sbjct: 1 MSASPTARQAI-TQALPMITRKVVISDPIQMPEVYSSTPGGTLYSTTPGGTKLIYERAFM 59
Query: 258 LSLRQSPISQTPPQCALPAALLKNPSSVP--NAQPASTQKPRSNSISFDESQETFSMDL 428
+LR SP+SQTPP +P+ LL+ P P T+ + E QE F +DL
Sbjct: 60 KNLRGSPLSQTPPS-NVPSCLLRGTPRTPFRKCVPVPTELIKQTKSLKIEDQEQFQLDL 117
>AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein.
Length = 1854
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 114 THSQSIPSRRVLITDPAQMPDVYSSTPGGTI 206
T SQ++ S I+ P QMPDV S TPGG +
Sbjct: 573 TSSQTLDS---FISKPLQMPDVTSGTPGGGV 600
>AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-PD,
isoform D protein.
Length = 1854
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 114 THSQSIPSRRVLITDPAQMPDVYSSTPGGTI 206
T SQ++ S I+ P QMPDV S TPGG +
Sbjct: 573 TSSQTLDS---FISKPLQMPDVTSGTPGGGV 600
>AF132162-1|AAD34750.1| 1219|Drosophila melanogaster unknown
protein.
Length = 1219
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 186 STPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLK-NPSSVPNAQPAS 362
+TP G + +TTPGGT + + +R P+ ++ P L + S+P +
Sbjct: 335 ATPTGGVTTTTPGGTTVTPRQ-----VRPIPLGKSFPTAKLNTTSISIRAPSIPQLNTSV 389
Query: 363 TQKPRSNSIS 392
T P + S+S
Sbjct: 390 TASPTAVSVS 399
>AE014296-2195|AAF49877.1| 1219|Drosophila melanogaster CG11006-PA,
isoform A protein.
Length = 1219
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 186 STPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLK-NPSSVPNAQPAS 362
+TP G + +TTPGGT + + +R P+ ++ P L + S+P +
Sbjct: 335 ATPTGGVTTTTPGGTTVTPRQ-----VRPIPLGKSFPTAKLNTTSISIRAPSIPQLNTSV 389
Query: 363 TQKPRSNSIS 392
T P + S+S
Sbjct: 390 TASPTAVSVS 399
>AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-PB,
isoform B protein.
Length = 1257
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 186 STPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLK-NPSSVPNAQPAS 362
+TP G + +TTPGGT + + +R P+ ++ P L + S+P +
Sbjct: 373 ATPTGGVTTTTPGGTTVTPRQ-----VRPIPLGKSFPTAKLNTTSISIRAPSIPQLNTSV 427
Query: 363 TQKPRSNSIS 392
T P + S+S
Sbjct: 428 TASPTAVSVS 437
>AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-PC,
isoform C protein.
Length = 1294
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 186 STPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLK-NPSSVPNAQPAS 362
+TP G + +TTPGGT + + +R P+ ++ P L + S+P +
Sbjct: 410 ATPTGGVTTTTPGGTTVTPRQ-----VRPIPLGKSFPTAKLNTTSISIRAPSIPQLNTSV 464
Query: 363 TQKPRSNSIS 392
T P + S+S
Sbjct: 465 TASPTAVSVS 474
>AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-PD,
isoform D protein.
Length = 1272
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 186 STPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLK-NPSSVPNAQPAS 362
+TP G + +TTPGGT + + +R P+ ++ P L + S+P +
Sbjct: 388 ATPTGGVTTTTPGGTTVTPRQ-----VRPIPLGKSFPTAKLNTTSISIRAPSIPQLNTSV 442
Query: 363 TQKPRSNSIS 392
T P + S+S
Sbjct: 443 TASPTAVSVS 452
>AY069316-1|AAL39461.1| 303|Drosophila melanogaster LD03052p
protein.
Length = 303
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +3
Query: 255 MLSLRQSPISQTPPQCALPAALLKNPSSVPNAQPASTQKPRSN 383
+ L + + T P A+P P S PN P S P SN
Sbjct: 45 LFGLTTNTTTTTNPMMAIPLPAPPGPHSAPNNSPNSNANPNSN 87
>AE014298-2564|AAO41692.1| 303|Drosophila melanogaster CG5445-PD,
isoform D protein.
Length = 303
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +3
Query: 255 MLSLRQSPISQTPPQCALPAALLKNPSSVPNAQPASTQKPRSN 383
+ L + + T P A+P P S PN P S P SN
Sbjct: 45 LFGLTTNTTTTTNPMMAIPLPAPPGPHSAPNNSPNSNANPNSN 87
>AE014298-2563|AAN09441.1| 303|Drosophila melanogaster CG5445-PC,
isoform C protein.
Length = 303
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +3
Query: 255 MLSLRQSPISQTPPQCALPAALLKNPSSVPNAQPASTQKPRSN 383
+ L + + T P A+P P S PN P S P SN
Sbjct: 45 LFGLTTNTTTTTNPMMAIPLPAPPGPHSAPNNSPNSNANPNSN 87
>AE014298-2562|AAF48724.1| 303|Drosophila melanogaster CG5445-PB,
isoform B protein.
Length = 303
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +3
Query: 255 MLSLRQSPISQTPPQCALPAALLKNPSSVPNAQPASTQKPRSN 383
+ L + + T P A+P P S PN P S P SN
Sbjct: 45 LFGLTTNTTTTTNPMMAIPLPAPPGPHSAPNNSPNSNANPNSN 87
>AE014298-2561|AAF48723.1| 303|Drosophila melanogaster CG5445-PA,
isoform A protein.
Length = 303
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +3
Query: 255 MLSLRQSPISQTPPQCALPAALLKNPSSVPNAQPASTQKPRSN 383
+ L + + T P A+P P S PN P S P SN
Sbjct: 45 LFGLTTNTTTTTNPMMAIPLPAPPGPHSAPNNSPNSNANPNSN 87
>AE014298-2111|AAF48430.1| 858|Drosophila melanogaster CG15028-PA,
isoform A protein.
Length = 858
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = +3
Query: 138 RRVLITDPAQMPDVYSSTPGGTIYSTTPGG--TRIVYERSFMLSLRQSPISQTPPQCALP 311
R + + P + P S +I S G I+ + + + + + PPQ
Sbjct: 217 RTIGVVHPLKKPQPASHQHVASIESQLRNGRLVEILAPTALLEQIPEPSTTHAPPQLGAA 276
Query: 312 AALLKNPSSVPNAQPASTQKPRSNS 386
+ L VP+ Q ++T+ P SNS
Sbjct: 277 SVLSTTVFQVPDVQTSTTRLPTSNS 301
>AE014298-2110|AAN09656.1| 968|Drosophila melanogaster CG15028-PB,
isoform B protein.
Length = 968
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = +3
Query: 138 RRVLITDPAQMPDVYSSTPGGTIYSTTPGG--TRIVYERSFMLSLRQSPISQTPPQCALP 311
R + + P + P S +I S G I+ + + + + + PPQ
Sbjct: 327 RTIGVVHPLKKPQPASHQHVASIESQLRNGRLVEILAPTALLEQIPEPSTTHAPPQLGAA 386
Query: 312 AALLKNPSSVPNAQPASTQKPRSNS 386
+ L VP+ Q ++T+ P SNS
Sbjct: 387 SVLSTTVFQVPDVQTSTTRLPTSNS 411
>AE014134-2102|AAF53125.2| 371|Drosophila melanogaster CG31757-PA
protein.
Length = 371
Score = 29.9 bits (64), Expect = 3.5
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +3
Query: 186 STPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNAQPAST 365
++PGG TPG + + R +SQ P + P N SS AQPA
Sbjct: 175 ASPGGAGAGVTPGA-----DNQDSIESRTKGVSQAPQTHSGPTGPPSNTSSETIAQPAPK 229
Query: 366 QKPRSNSISFDESQETFSMD 425
+P ++ +E+ S D
Sbjct: 230 LQPALETVRESVMEESPSKD 249
>AY084186-1|AAL89924.1| 834|Drosophila melanogaster RE69157p
protein.
Length = 834
Score = 29.5 bits (63), Expect = 4.6
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +3
Query: 186 STPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNAQPAST 365
++PGG TPG + + R +SQ P + P N SS AQPA
Sbjct: 175 ASPGGAGAGVTPGA-----DNQDSIESRTKGVSQAPQTHSGPTGPPSNTSSETIAQPAPK 229
Query: 366 QKPRSNSISFDESQETFSMD 425
+P ++ +E+ S D
Sbjct: 230 LQPALETVRESVMKESPSKD 249
>L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding
protein protein.
Length = 416
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 325 RIRLRYPTRSRPAHKNLDLTR-YHSTSRRKPSAW 423
R R R+ +RSR H+ R +H SRRKPS +
Sbjct: 10 RERRRHRSRSRDRHRERSRDRRHHRNSRRKPSLY 43
>AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p
protein.
Length = 416
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 325 RIRLRYPTRSRPAHKNLDLTR-YHSTSRRKPSAW 423
R R R+ +RSR H+ R +H SRRKPS +
Sbjct: 10 RERRRHRSRSRDRHRERSRDRRHHRNSRRKPSLY 43
>AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA
protein.
Length = 416
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 325 RIRLRYPTRSRPAHKNLDLTR-YHSTSRRKPSAW 423
R R R+ +RSR H+ R +H SRRKPS +
Sbjct: 10 RERRRHRSRSRDRHRERSRDRRHHRNSRRKPSLY 43
>BT025853-1|ABF85753.1| 1471|Drosophila melanogaster IP15211p
protein.
Length = 1471
Score = 28.7 bits (61), Expect = 8.1
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Frame = +3
Query: 135 SRRVLITDPAQMPDVYSSTPG-GTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCA-- 305
+R I P P V + P T R +ER +LRQSP S PP +
Sbjct: 229 AREPAIVSPVIKPAVQVAEPAIRTQPRPIISSQRNPHERDMFAALRQSPPSDDPPSTSSS 288
Query: 306 -LPAALLKNPSS-VPNAQPASTQKPRSN 383
+ +NPSS +P AS S+
Sbjct: 289 PTSSPAFRNPSSRLPIVSTASLSSSSSS 316
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,682,350
Number of Sequences: 53049
Number of extensions: 742424
Number of successful extensions: 2181
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2170
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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