Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11b12
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 31 1.1
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 31 1.1
Z73908-5|CAA98129.2| 325|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 28 5.6
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 5.6
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 5.6
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 5.6
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 28 5.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 5.6
AC006696-2|ABQ13058.1| 129|Caenorhabditis elegans Hypothetical ... 28 5.6
AC006696-1|AAF39991.1| 151|Caenorhabditis elegans Hypothetical ... 28 5.6
Z75554-1|CAA99953.3| 681|Caenorhabditis elegans Hypothetical pr... 27 9.8
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 171 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNA 350
P+ + PG T GT V ++ M QS S PP+ + + P+ VP
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418
Query: 351 QPASTQKPRSNSIS 392
PA+ +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 171 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNA 350
P+ + PG T GT V ++ M QS S PP+ + + P+ VP
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418
Query: 351 QPASTQKPRSNSIS 392
PA+ +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 171 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNA 350
P+ + PG T GT V ++ M QS S PP+ + + P+ VP
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418
Query: 351 QPASTQKPRSNSIS 392
PA+ +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432
>Z73908-5|CAA98129.2| 325|Caenorhabditis elegans Hypothetical
protein F53B2.4 protein.
Length = 325
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 494 SLRMFRLLCLLDVCGLFVKLARAKHNKKTCLTGHHFLFRSLVAL*KLNS-LTVILLLFLW 670
+L ++ LLC++ L +KL + K+N+K+ + L SL L L S LT + ++
Sbjct: 210 NLAIWLLLCIISNLTLLIKLKKLKNNRKSAILQRAELSLSLTTLSMLLSFLTNLACALIF 269
Query: 671 II 676
+I
Sbjct: 270 LI 271
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +3
Query: 159 PAQMPDVYSSTPGGTIYSTTPGGTRI-VYERSFMLSLRQSPISQTPPQCALPAALLKN-- 329
P+Q P P T + P +I V ++ S + SP Q PQ + P A
Sbjct: 197 PSQSPQGSPQLPTQTTTTNAPIKIKIQVQQQQPQQSPQNSPQQQAQPQASQPIAQTTQTI 256
Query: 330 PSSVPNAQP 356
P+S+P A P
Sbjct: 257 PASIPQAAP 265
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 261 SLRQSPISQTPPQCALPAALLK---NPSSVPNAQPASTQKPRSNSISFDESQETFSMD 425
SL S TP Q + L+ +PS +P+ PA KPR + +S S F D
Sbjct: 255 SLASSDAPATPDQNKSDNSSLRQTPSPSVLPSPVPAPMAKPRESVVSMANSTNPFDDD 312
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 5.6
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +3
Query: 114 THSQSIPSRRVLITDPAQ---MPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPIS 284
T S + P+ V T P +P V ++TP T +TT T ++ +P+
Sbjct: 657 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT----TPTTPVV 712
Query: 285 QTPPQCALPAALLKNPSSVPNAQPAST 365
TP + P+S P QPA+T
Sbjct: 713 TTPSTITPTTRPVTQPASQPATQPATT 739
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 5.6
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +3
Query: 114 THSQSIPSRRVLITDPAQ---MPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPIS 284
T S + P+ V T P +P V ++TP T +TT T ++ +P+
Sbjct: 713 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT----TPTTPVV 768
Query: 285 QTPPQCALPAALLKNPSSVPNAQPAST 365
TP + P+S P QPA+T
Sbjct: 769 TTPSTITPTTRPVTQPASQPATQPATT 795
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 5.6
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +3
Query: 114 THSQSIPSRRVLITDPAQ---MPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPIS 284
T S + P+ V T P +P V ++TP T +TT T ++ +P+
Sbjct: 536 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT----TPTTPVV 591
Query: 285 QTPPQCALPAALLKNPSSVPNAQPAST 365
TP + P+S P QPA+T
Sbjct: 592 TTPSTITPTTRPVTQPASQPATQPATT 618
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 28.3 bits (60), Expect = 5.6
Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 66 PRKFLIMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTP-GGTIYSTTPGGTRIVY 242
PR I + +A+ + +R V + DP P YS TP T + + +
Sbjct: 424 PRSIYIETGKSTYGEASKTSGNNARSVYLADPVSAPKAYSVTPQKSTKTPSERKSEKNLE 483
Query: 243 ERSFMLSLR--QSPISQ---TPPQCALPAALLKNPSSVPNAQPASTQKPRSNSISFDESQ 407
+++ S++ +S I Q T + K PSS +++ +S ++ +S ++S S+
Sbjct: 484 KKASKKSIKSSRSGIQQREVTKTSSKHSSKHSKAPSSKKSSKKSSKKEQKSRALSNSSSK 543
Query: 408 ET 413
++
Sbjct: 544 KS 545
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 60 LTPRKFLIMSASPIARQATHSQSIPS-RRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRI 236
LTP + I+S P +RQ+T + S+P+ + P+Q + S+ P I+ T +
Sbjct: 832 LTPSELPIISNLPASRQSTSAPSVPNVSNNSPSPPSQSIPIESTVP---IFGTPSSIPSM 888
Query: 237 VYERSFMLSLRQSPIS 284
RS S + P+S
Sbjct: 889 EPTRSTANSSKNHPVS 904
>AC006696-2|ABQ13058.1| 129|Caenorhabditis elegans Hypothetical
protein W08E12.8b protein.
Length = 129
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +3
Query: 138 RRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAA 317
RRVL + + P + S + +STTP + + +LS S SQ PP LP
Sbjct: 11 RRVLDEEENECPPIESRGSSTSSFSTTPSSSASPLSINQLLS---SSFSQ-PPAPQLPVP 66
Query: 318 LLKNP 332
L NP
Sbjct: 67 LAFNP 71
>AC006696-1|AAF39991.1| 151|Caenorhabditis elegans Hypothetical
protein W08E12.8a protein.
Length = 151
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +3
Query: 138 RRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAA 317
RRVL + + P + S + +STTP + + +LS S SQ PP LP
Sbjct: 33 RRVLDEEENECPPIESRGSSTSSFSTTPSSSASPLSINQLLS---SSFSQ-PPAPQLPVP 88
Query: 318 LLKNP 332
L NP
Sbjct: 89 LAFNP 93
>Z75554-1|CAA99953.3| 681|Caenorhabditis elegans Hypothetical
protein ZC455.1 protein.
Length = 681
Score = 27.5 bits (58), Expect = 9.8
Identities = 24/90 (26%), Positives = 35/90 (38%)
Frame = +3
Query: 132 PSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALP 311
P + V D P Y S+ Y +P +R RS R S S P C LP
Sbjct: 10 PIKMVGSQDSWGTPPHYRSSLNSN-YRDSPANSRNTSARS-----RLSVSSAQSPHCFLP 63
Query: 312 AALLKNPSSVPNAQPASTQKPRSNSISFDE 401
+P S+P+ + S+ I+ +E
Sbjct: 64 TTRDSSPRSIPSPSLVPMRPDSSSDITINE 93
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 27.5 bits (58), Expect = 9.8
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = +3
Query: 24 STNKCLVWNFVKLTPRKFLIMSASPIARQATHSQSIPSRRVLI--TDPAQMPDVYSSTPG 197
ST FV T F +S++ ++ +++ + S ++ + T Q+P +S
Sbjct: 532 STTSPFATRFVFSTRVTFRPVSSTVVSTKSSTTSSTTTKPTTLSTTTTTQVPSTTTSVTV 591
Query: 198 GTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSV 341
+ TP +R + + S +P TP + LP LL+ S++
Sbjct: 592 PSTQKATPSPSRTTKKSTTTTSTTATPRQATPTRNPLP--LLQTMSAI 637
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,550,486
Number of Sequences: 27780
Number of extensions: 363765
Number of successful extensions: 1040
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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