Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11b07
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    26   1.3  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   3.9  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   9.0  

>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 93   SIRLAEEPISPLLPNSDWNYSVTYFHF 13
            +IR   EPI    P+ DWN+ V+  +F
Sbjct: 1087 TIRERLEPIRKEFPDKDWNFWVSKAYF 1113


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 439 PPPMYDFPFPSADMLKRLPHITASQTNKSIAISKLQ 546
           PPP YD   P   ++  L      Q + +I +S+L+
Sbjct: 481 PPPTYDVGLPQGVVMNPLDAQCNVQRDDAICVSQLK 516


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 319 ILEEMTKMIMLGVVLWLGVTFGSHVSPYPLNLIFISDTIHPP 444
           IL  +   ++ GV L+LG+   S V  +    +F+    H P
Sbjct: 864 ILRLIPMSVLFGVFLYLGIASMSGVQLFERLRLFLMPVKHHP 905


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,141
Number of Sequences: 2352
Number of extensions: 13549
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)