Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11b07
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenou... 32 2.2
DQ058015-1|AAY87454.1| 700|Homo sapiens env type 2 protein. 32 2.2
AF490464-1|AAM09525.1| 674|Homo sapiens envelope glycoprotein p... 32 2.2
AF164615-2|AAD51800.1| 698|Homo sapiens envelope protein protein. 32 2.2
AF164614-2|AAD51798.1| 699|Homo sapiens envelope protein protein. 32 2.2
AF074086-8|AAD21098.1| 699|Homo sapiens envelope protein. 32 2.2
AF074086-4|AAF88168.1| 699|Homo sapiens envelope protein. 32 2.2
AF333073-1|AAL16780.1| 560|Homo sapiens env protein protein. 31 5.0
AF333069-1|AAL16777.1| 560|Homo sapiens env protein protein. 31 5.0
BC069391-1|AAH69391.1| 119|Homo sapiens chemokine (C-C motif) l... 30 6.7
BC069072-1|AAH69072.1| 119|Homo sapiens small inducible cytokin... 30 6.7
AJ223461-1|CAA11383.1| 115|Homo sapiens MPIF-2 protein. 30 6.7
AC005102-1|AAD15410.1| 119|Homo sapiens unknown protein. 30 6.7
DQ058016-1|AAY87455.1| 603|Homo sapiens env type 1 protein. 30 8.8
>M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenous
retrovirus HERV-K10. ).
Length = 1361
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 358 VLWLGVTFGSHVSPYPLNLIF-ISDTIHPPPMYDFPFPSADMLKRLPHITASQTNKSIAI 534
V+W+G S + L + SD P +Y+ DM++R H+ + N ++ I
Sbjct: 1195 VIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRR--HLQGREDNLTLDI 1252
Query: 535 SKLQISMLERFEKNLEASEITPKVGSAAQGLA 630
SKL+ + E + +L T + A GLA
Sbjct: 1253 SKLKEQIFEASKAHLNLVPGTEAIAGVADGLA 1284
>DQ058015-1|AAY87454.1| 700|Homo sapiens env type 2 protein.
Length = 700
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 358 VLWLGVTFGSHVSPYPLNLIF-ISDTIHPPPMYDFPFPSADMLKRLPHITASQTNKSIAI 534
V+W+G S + L + SD P +Y+ DM++R H+ + N ++ I
Sbjct: 534 VIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRR--HLQGREDNLTLDI 591
Query: 535 SKLQISMLERFEKNLEASEITPKVGSAAQGLA 630
SKL+ + E + +L T + A GLA
Sbjct: 592 SKLKEQIFEASKAHLNLVPGTEAIAGVADGLA 623
>AF490464-1|AAM09525.1| 674|Homo sapiens envelope glycoprotein
protein.
Length = 674
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 358 VLWLGVTFGSHVSPYPLNLIF-ISDTIHPPPMYDFPFPSADMLKRLPHITASQTNKSIAI 534
V+W+G S + L + SD P +Y+ DM++R H+ + N ++ I
Sbjct: 533 VIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRR--HLQGREDNLTLDI 590
Query: 535 SKLQISMLERFEKNLEASEITPKVGSAAQGLA 630
SKL+ + E + +L T + A GLA
Sbjct: 591 SKLKEQIFEASKAHLNLVPGTEAIAGVADGLA 622
>AF164615-2|AAD51800.1| 698|Homo sapiens envelope protein protein.
Length = 698
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 358 VLWLGVTFGSHVSPYPLNLIF-ISDTIHPPPMYDFPFPSADMLKRLPHITASQTNKSIAI 534
V+W+G S + L + SD P +Y+ DM++R H+ + N ++ I
Sbjct: 532 VIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRR--HLQGREDNLTLDI 589
Query: 535 SKLQISMLERFEKNLEASEITPKVGSAAQGLA 630
SKL+ + E + +L T + A GLA
Sbjct: 590 SKLKEQIFEASKAHLNLVPGTEAIAGVADGLA 621
>AF164614-2|AAD51798.1| 699|Homo sapiens envelope protein protein.
Length = 699
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 358 VLWLGVTFGSHVSPYPLNLIF-ISDTIHPPPMYDFPFPSADMLKRLPHITASQTNKSIAI 534
V+W+G S + L + SD P +Y+ DM++R H+ + N ++ I
Sbjct: 533 VIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRR--HLQGREDNLTLDI 590
Query: 535 SKLQISMLERFEKNLEASEITPKVGSAAQGLA 630
SKL+ + E + +L T + A GLA
Sbjct: 591 SKLKEQIFEASKAHLNLVPGTEAIAGVADGLA 622
>AF074086-8|AAD21098.1| 699|Homo sapiens envelope protein.
Length = 699
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 358 VLWLGVTFGSHVSPYPLNLIF-ISDTIHPPPMYDFPFPSADMLKRLPHITASQTNKSIAI 534
V+W+G S + L + SD P +Y+ DM++R H+ + N ++ I
Sbjct: 533 VIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRR--HLQGREDNLTLDI 590
Query: 535 SKLQISMLERFEKNLEASEITPKVGSAAQGLA 630
SKL+ + E + +L T + A GLA
Sbjct: 591 SKLKEQIFEASKAHLNLVPGTEAIAGVADGLA 622
>AF074086-4|AAF88168.1| 699|Homo sapiens envelope protein.
Length = 699
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 358 VLWLGVTFGSHVSPYPLNLIF-ISDTIHPPPMYDFPFPSADMLKRLPHITASQTNKSIAI 534
V+W+G S + L + SD P +Y+ DM++R H+ + N ++ I
Sbjct: 533 VIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRR--HLQGREDNLTLDI 590
Query: 535 SKLQISMLERFEKNLEASEITPKVGSAAQGLA 630
SKL+ + E + +L T + A GLA
Sbjct: 591 SKLKEQIFEASKAHLNLVPGTEAIAGVADGLA 622
>AF333073-1|AAL16780.1| 560|Homo sapiens env protein protein.
Length = 560
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 358 VLWLGVTFGSHVSPYPLNLIF-ISDTIHPPPMYDFPFPSADMLKRLPHITASQTNKSIAI 534
V+W+G + + L + SD P +Y+ DM++R H+ + N ++ I
Sbjct: 422 VIWMGDRLMTLEHHFQLQCDWNTSDFCITPQIYNESEHHWDMVRR--HLQGREDNLTLDI 479
Query: 535 SKLQISMLERFEKNLEASEITPKVGSAAQGLA 630
SKL+ + E + +L T + A GLA
Sbjct: 480 SKLKEQIFEASKAHLNLVPGTEAIAGVADGLA 511
>AF333069-1|AAL16777.1| 560|Homo sapiens env protein protein.
Length = 560
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 358 VLWLGVTFGSHVSPYPLNLIF-ISDTIHPPPMYDFPFPSADMLKRLPHITASQTNKSIAI 534
V+W+G + + L + SD P +Y+ DM++R H+ + N ++ I
Sbjct: 422 VIWMGDRLMTLEHHFQLQCDWNTSDFCITPQIYNESEHHWDMVRR--HLQGREDNLTLDI 479
Query: 535 SKLQISMLERFEKNLEASEITPKVGSAAQGLA 630
SKL+ + E + +L T + A GLA
Sbjct: 480 SKLKEQIFEASKAHLNLVPGTEAIAGVADGLA 511
>BC069391-1|AAH69391.1| 119|Homo sapiens chemokine (C-C motif)
ligand 24 protein.
Length = 119
Score = 30.3 bits (65), Expect = 6.7
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +1
Query: 331 MTKMIMLGVVLWLGVTFGSHVSPYPLNLIFISDTIHPPPMYDFPFPSADMLKRLPHITAS 510
+T ++ LGV + GS V P P + F+S I + + S + I +
Sbjct: 8 VTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTT 67
Query: 511 QTNKSIAISKLQISMLERFEKNLEASEITPKVGSAAQGLAIHG 639
+ + Q ++R+ KNL+A + K A+ +A+ G
Sbjct: 68 KKGQQFCGDPKQ-EWVQRYMKNLDAKQ--KKASPRARAVAVKG 107
>BC069072-1|AAH69072.1| 119|Homo sapiens small inducible cytokine
A24, precursor protein.
Length = 119
Score = 30.3 bits (65), Expect = 6.7
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +1
Query: 331 MTKMIMLGVVLWLGVTFGSHVSPYPLNLIFISDTIHPPPMYDFPFPSADMLKRLPHITAS 510
+T ++ LGV + GS V P P + F+S I + + S + I +
Sbjct: 8 VTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTT 67
Query: 511 QTNKSIAISKLQISMLERFEKNLEASEITPKVGSAAQGLAIHG 639
+ + Q ++R+ KNL+A + K A+ +A+ G
Sbjct: 68 KKGQQFCGDPKQ-EWVQRYMKNLDAKQ--KKASPRARAVAVKG 107
>AJ223461-1|CAA11383.1| 115|Homo sapiens MPIF-2 protein.
Length = 115
Score = 30.3 bits (65), Expect = 6.7
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +1
Query: 331 MTKMIMLGVVLWLGVTFGSHVSPYPLNLIFISDTIHPPPMYDFPFPSADMLKRLPHITAS 510
+T ++ LGV + GS V P P + F+S I + + S + I +
Sbjct: 6 VTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTT 65
Query: 511 QTNKSIAISKLQISMLERFEKNLEASEITPKVGSAAQGLAIHG 639
+ + Q ++R+ KNL+A + K A+ +A+ G
Sbjct: 66 KKGQQFCGDPKQ-EWVQRYMKNLDAKQ--KKASPRARAVAVKG 105
>AC005102-1|AAD15410.1| 119|Homo sapiens unknown protein.
Length = 119
Score = 30.3 bits (65), Expect = 6.7
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +1
Query: 331 MTKMIMLGVVLWLGVTFGSHVSPYPLNLIFISDTIHPPPMYDFPFPSADMLKRLPHITAS 510
+T ++ LGV + GS V P P + F+S I + + S + I +
Sbjct: 8 VTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTT 67
Query: 511 QTNKSIAISKLQISMLERFEKNLEASEITPKVGSAAQGLAIHG 639
+ + Q ++R+ KNL+A + K A+ +A+ G
Sbjct: 68 KKGQQFCGDPKQ-EWVQRYMKNLDAKQ--KKASPRARAVAVKG 107
>DQ058016-1|AAY87455.1| 603|Homo sapiens env type 1 protein.
Length = 603
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +1
Query: 358 VLWLGVTFGSHVSPYPLNLIF-ISDTIHPPPMYDFPFPSADMLKRLPHITASQTNKSIAI 534
V+W+G S + L + SD P +Y+ DM++ H+ + N ++ I
Sbjct: 437 VIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRH--HLQGREDNLTLDI 494
Query: 535 SKLQISMLERFEKNLEASEITPKVGSAAQGLA 630
SKL+ + E + +L T + A GLA
Sbjct: 495 SKLKEQIFEASKAHLNLVPGTEAIAGVADGLA 526
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,971,573
Number of Sequences: 237096
Number of extensions: 1909550
Number of successful extensions: 4011
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4011
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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