Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11b01
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 187 5e-48
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 101 5e-22
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 86 2e-17
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 79 2e-15
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical... 30 1.7
Z93778-5|CAB07844.2| 336|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC024877-7|AAF60907.3| 438|Caenorhabditis elegans Hypothetical ... 29 3.0
Z68159-3|CAD89733.1| 351|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z68159-2|CAD89732.1| 354|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical ... 27 9.1
AF475094-1|AAL84635.1| 533|Caenorhabditis elegans SRC-1 protein. 27 9.1
AF419171-1|AAN31394.1| 533|Caenorhabditis elegans protein tyros... 27 9.1
AC084161-5|AAK29735.4| 533|Caenorhabditis elegans Src oncogene ... 27 9.1
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 187 bits (456), Expect = 5e-48
Identities = 101/196 (51%), Positives = 122/196 (62%)
Frame = +2
Query: 77 KGIFIVAAKRTPFGKMGGLLKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVYSLSG 256
K +FIV AKRT FG GG LK + +DL VA++ + K NV VD V G V ++
Sbjct: 4 KCVFIVGAKRTAFGTFGGKLKGLSATDLGVVASQAALKHANVGADAVDHVIFGNV--VAS 61
Query: 257 TSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAGGTENM 436
+ DG RH LKSGVPQ AL VNRLCGSGFQAV+N+AQ I G + I LAGGTENM
Sbjct: 62 SRDGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQAVVNAAQAIKLGESNIVLAGGTENM 121
Query: 437 SAVPFVVRNTRFGVPLGVNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYELKRGEVDQF 616
S VPF VR+ RFG LG FED L D Y M QTAE L +Y++ R E D+F
Sbjct: 122 SMVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAKLAMGQTAEKLGAQYKVTRQEADEF 181
Query: 617 SLQSQQRWKTAHDSGV 664
+L+SQ WK A ++GV
Sbjct: 182 ALRSQTLWKKAQEAGV 197
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 101 bits (242), Expect = 5e-22
Identities = 63/200 (31%), Positives = 99/200 (49%)
Frame = +2
Query: 62 AVAVNKGIFIVAAKRTPFGKMGGLLKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQV 241
A NK FIV A RTP G L + +L +VA K + + G V P+ + V +GQV
Sbjct: 17 AALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQV 76
Query: 242 YSLSGTSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAG 421
+ G R AAL +G+ VN++C SG +A+I +AQ I TG ++ G
Sbjct: 77 CQANA---GQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGG 133
Query: 422 GTENMSAVPFVVRNTRFGVPLGVNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYELKRG 601
G E+MS VPF V+ R +P G + + G D Y M E +++ + R
Sbjct: 134 GMESMSQVPFYVQ--RGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRK 191
Query: 602 EVDQFSLQSQQRWKTAHDSG 661
+ D++++ S ++ A ++G
Sbjct: 192 DQDEYAINSYKKSAKAWENG 211
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 85.8 bits (203), Expect = 2e-17
Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 1/196 (0%)
Frame = +2
Query: 74 NKGIFIVAAKRTPFGKMGGLLKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVYSLS 253
+K +FI++ RTP G G + +L VAAK + + VAP ++ V IG +
Sbjct: 3 DKKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEV-IGGCVLPA 61
Query: 254 GTSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAGGTEN 433
G G R +L +G+P A+ VN++C S +A++ +A +I G L GTEN
Sbjct: 62 GL--GQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTEN 119
Query: 434 MSAVPFVVRNTRFGVPLGVNIPFEDSLSAGSL-DTYCNYTMPQTAENLAEKYELKRGEVD 610
MS VPF V R +P G I D +S L D M AE + Y + R E D
Sbjct: 120 MSQVPFYV--PRGEIPFG-GIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQD 176
Query: 611 QFSLQSQQRWKTAHDS 658
++++S ++ A S
Sbjct: 177 AYAIESYKKASNAWSS 192
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 79.4 bits (187), Expect = 2e-15
Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Frame = +2
Query: 62 AVAVNKGIFIVAAKRTPFGKMGGLLKDIHPSDLLAVAAKESFKAGNVAPALVDTVNI--G 235
A NK FIV A RTP G L + +L +VA K + + G V P+ + N+ G
Sbjct: 95 AALSNKDAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEANVFLG 154
Query: 236 QVYSLSGTSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISL 415
QV + G S R AAL +G+ VN+ SG +A+I +AQ I TG +++
Sbjct: 155 QVCHANA---GQASARQAALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTGHQDLAI 211
Query: 416 AGGTENMSAVPF 451
GG E+MS VPF
Sbjct: 212 GGGMESMSQVPF 223
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 59.3 bits (137), Expect = 2e-09
Identities = 60/209 (28%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Frame = +2
Query: 83 IFIVAAKRTPFGKMGGLLKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVYSLSGTS 262
I +V A RTPF G + KD+ DL A K + + +D + G V TS
Sbjct: 26 IVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGTVIQECKTS 85
Query: 263 DGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAGGTENMSA 442
+ R AAL +GVP + PA V C S A+ + TG A +AGG E +S
Sbjct: 86 N---IAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELLSD 142
Query: 443 VPF-VVRNTR---FGVPLGVNIPFE--------DSLSAGSLDTYCNY----TMPQTAENL 574
VP RN R G+ ++P + +L + L + TM + + L
Sbjct: 143 VPIRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGETMGHSGDRL 202
Query: 575 AEKYELKRGEVDQFSLQSQQRWKTAHDSG 661
A + + R E D+F+++S A +G
Sbjct: 203 AAAFNVSRREQDEFAIRSHTLASEAAKNG 231
>AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical
protein Y56A3A.16 protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +1
Query: 268 WFITPSRSPEIRRATRKT---CTGRQQIVWIRIPSCH*QCPRYFNRYGSDFLSRWHG 429
W +T + P IR+ C +Q + + QCPR+ + YG F S HG
Sbjct: 324 WILTIHKQPPIRQGLESQQWKCAACRQSLHTHNINDREQCPRFCDYYGLFFCSLCHG 380
>Z93778-5|CAB07844.2| 336|Caenorhabditis elegans Hypothetical
protein C31H5.1 protein.
Length = 336
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 488 VNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYELKRGE 604
VN P + ++ G DTY N A+ L EK ELK+ E
Sbjct: 87 VNWPGSEFVTGGMNDTYTNAERNSYAKALMEKLELKKVE 125
>AC024877-7|AAF60907.3| 438|Caenorhabditis elegans Hypothetical
protein Y95B8A.11 protein.
Length = 438
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 498 PSKIPSQRDLWTHTAT-TLCLKLLKIWLRNTNSKGEKLISFRFNPSRDGKQRTTAAS 665
P P+ + H + +LCLK LK W R+ + K + F + P RD ++ AS
Sbjct: 342 PRLFPNATNFGFHRSPISLCLKALKEWSRDRIADTRKTLCF-YQPERDFRKFLFEAS 397
>Z68159-3|CAD89733.1| 351|Caenorhabditis elegans Hypothetical
protein C33D9.3b protein.
Length = 351
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 193 RKCCSCFGRHCQHWTGLFAKRNIRRWFITP 282
+ CCS G C H GL + ++ R F TP
Sbjct: 217 KNCCSITGEACVHGDGLQEETSMVRRFTTP 246
>Z68159-2|CAD89732.1| 354|Caenorhabditis elegans Hypothetical
protein C33D9.3a protein.
Length = 354
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 193 RKCCSCFGRHCQHWTGLFAKRNIRRWFITP 282
+ CCS G C H GL + ++ R F TP
Sbjct: 220 KNCCSITGEACVHGDGLQEETSMVRRFTTP 249
>AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical
protein Y6B3B.9 protein.
Length = 485
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 622 KRKLINFSPFEFVFLSQIFSSLRHSVVAVCV 530
++ +++F+P+E+ ++ Q+F S R V CV
Sbjct: 7 RQLIVSFTPYEWKYVRQLFRSRRIEDVKECV 37
>AF475094-1|AAL84635.1| 533|Caenorhabditis elegans SRC-1 protein.
Length = 533
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +2
Query: 251 SGTSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAGG 424
SG SD G+S R + PQ++ VN G + +N D + G + GG
Sbjct: 11 SGGSDMGVSERIDVSRFQTPQQQTVFHVNNGGNEGTISQLNGTSDGMMGNGRGGGGGG 68
>AF419171-1|AAN31394.1| 533|Caenorhabditis elegans protein tyrosine
kinase protein.
Length = 533
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +2
Query: 251 SGTSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAGG 424
SG SD G+S R + PQ++ VN G + +N D + G + GG
Sbjct: 11 SGGSDMGVSERIDVSRFQTPQQQTVFHVNNGGNEGTISQLNGTSDGMMGNGRGGGGGG 68
>AC084161-5|AAK29735.4| 533|Caenorhabditis elegans Src oncogene
related protein 1 protein.
Length = 533
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +2
Query: 251 SGTSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAGG 424
SG SD G+S R + PQ++ VN G + +N D + G + GG
Sbjct: 11 SGGSDMGVSERIDVSRFQTPQQQTVFHVNNGGNEGTISQLNGTSDGMMGNGRGGGGGG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,245,497
Number of Sequences: 27780
Number of extensions: 370792
Number of successful extensions: 961
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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