Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11a16
         (648 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC026245-1|AAH26245.1|  124|Homo sapiens mitogen-activated prote...   144   3e-34
AF201947-1|AAF17239.1|  124|Homo sapiens MEK binding partner 1 p...   144   3e-34
AK223311-1|BAD97031.1|  124|Homo sapiens mitogen-activated prote...   140   3e-33

>BC026245-1|AAH26245.1|  124|Homo sapiens mitogen-activated protein
           kinase kinase 1 interacting protein 1 protein.
          Length = 124

 Score =  144 bits (348), Expect = 3e-34
 Identities = 64/121 (52%), Positives = 90/121 (74%)
 Frame = +1

Query: 100 MVDDLRKYLNHLLEKVNGLHCILITDRDGVPLVRAVTERAPPLALRPNFISTFGMATDQA 279
           M DDL+++L   L  V GLH I+++DRDGVP+++   + AP  ALRP F+STF +ATDQ 
Sbjct: 1   MADDLKRFLYKKLPSVEGLHAIVVSDRDGVPVIKVANDNAPEHALRPGFLSTFALATDQG 60

Query: 280 SKLGLGRNKTIISMYSSYQVVQMSKLPLVITFIGSDNCNTGHILSLESQIEPFLKDLEVV 459
           SKLGL +NK+II  Y++YQVVQ ++LPLV++FI S + NTG I+SLE ++ P  ++L  V
Sbjct: 61  SKLGLSKNKSIICYYNTYQVVQFNRLPLVVSFIASSSANTGLIVSLEKELAPLFEELRQV 120

Query: 460 V 462
           V
Sbjct: 121 V 121


>AF201947-1|AAF17239.1|  124|Homo sapiens MEK binding partner 1
           protein.
          Length = 124

 Score =  144 bits (348), Expect = 3e-34
 Identities = 64/121 (52%), Positives = 90/121 (74%)
 Frame = +1

Query: 100 MVDDLRKYLNHLLEKVNGLHCILITDRDGVPLVRAVTERAPPLALRPNFISTFGMATDQA 279
           M DDL+++L   L  V GLH I+++DRDGVP+++   + AP  ALRP F+STF +ATDQ 
Sbjct: 1   MADDLKRFLYKKLPSVEGLHAIVVSDRDGVPVIKVANDNAPEHALRPGFLSTFALATDQG 60

Query: 280 SKLGLGRNKTIISMYSSYQVVQMSKLPLVITFIGSDNCNTGHILSLESQIEPFLKDLEVV 459
           SKLGL +NK+II  Y++YQVVQ ++LPLV++FI S + NTG I+SLE ++ P  ++L  V
Sbjct: 61  SKLGLSKNKSIICYYNTYQVVQFNRLPLVVSFIASSSANTGLIVSLEKELAPLFEELRQV 120

Query: 460 V 462
           V
Sbjct: 121 V 121


>AK223311-1|BAD97031.1|  124|Homo sapiens mitogen-activated protein
           kinase kinase 1 interacting protein 1 variant protein.
          Length = 124

 Score =  140 bits (340), Expect = 3e-33
 Identities = 63/121 (52%), Positives = 89/121 (73%)
 Frame = +1

Query: 100 MVDDLRKYLNHLLEKVNGLHCILITDRDGVPLVRAVTERAPPLALRPNFISTFGMATDQA 279
           M DDL+++L   L  V GLH I+++DRDGVP+++   + AP  ALRP  +STF +ATDQ 
Sbjct: 1   MADDLKRFLYKKLPSVEGLHAIVVSDRDGVPVIKVANDNAPEHALRPGSLSTFALATDQG 60

Query: 280 SKLGLGRNKTIISMYSSYQVVQMSKLPLVITFIGSDNCNTGHILSLESQIEPFLKDLEVV 459
           SKLGL +NK+II  Y++YQVVQ ++LPLV++FI S + NTG I+SLE ++ P  ++L  V
Sbjct: 61  SKLGLSKNKSIICYYNTYQVVQFNRLPLVVSFIASSSANTGLIVSLEKELAPLFEELRQV 120

Query: 460 V 462
           V
Sbjct: 121 V 121


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,956,414
Number of Sequences: 237096
Number of extensions: 1953716
Number of successful extensions: 2891
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2891
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)