Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11a15
         (421 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    28   0.16 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   6.0  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    22   7.9  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    22   7.9  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    22   7.9  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 27.9 bits (59), Expect = 0.16
 Identities = 18/53 (33%), Positives = 33/53 (62%)
 Frame = +1

Query: 118 DADRLVETLDRVLGELDDTRISNIKLEVLVTPINTEVPKKENVIKSSVQKAIK 276
           DA  L++ + + +G+L   RI     EVL+T I+  + KKE+V +  +Q+A++
Sbjct: 182 DAASLLQRIQQEVGDLAAGRIVTEMAEVLITGIDM-LAKKEDV-ERGLQRALE 232


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = -3

Query: 173 VSSNSPKTLSRVSTSLSASCVVNTMGGLNFNTLLSGPSRLINIFSSLIL 27
           ++  +P T S +  +L  + +  T+G  NF T+L  P+   + +S + L
Sbjct: 559 INMENPDTRSLLG-NLHLAKMQWTLGQKNFETILKNPATSSDAYSLIAL 606


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 146 TGF*GSWMTQEYRILNWK 199
           TG+  SW TQ Y IL W+
Sbjct: 412 TGYRSSWWTQFYCIL-WR 428


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 146 TGF*GSWMTQEYRILNWK 199
           TG+  SW TQ Y IL W+
Sbjct: 412 TGYRSSWWTQFYCIL-WR 428


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 146 TGF*GSWMTQEYRILNWK 199
           TG+  SW TQ Y IL W+
Sbjct: 390 TGYRSSWWTQFYCIL-WR 406


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,599
Number of Sequences: 2352
Number of extensions: 7150
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)