Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11a15
         (421 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical pr...    40   7e-04
U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical pr...    35   0.027
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr...    29   1.0  
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int...    29   1.0  
Z81139-3|CAB03482.1|  520|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U28928-11|AAA68342.3|  824|Caenorhabditis elegans Hypothetical p...    29   1.8  
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr...    28   2.4  
AF016656-1|AAB66040.1|  332|Caenorhabditis elegans Hypothetical ...    28   2.4  
AF016428-1|AAO26001.1|  330|Caenorhabditis elegans Serpentine re...    27   4.1  
AF016674-3|AAB66128.1|  558|Caenorhabditis elegans Hypothetical ...    27   5.5  
AL117204-43|CAB55131.2|  917|Caenorhabditis elegans Hypothetical...    27   7.2  
AL117203-7|CAB55109.1|  191|Caenorhabditis elegans Hypothetical ...    26   9.5  

>U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical
           protein T01B11.2a protein.
          Length = 467

 Score = 39.9 bits (89), Expect = 7e-04
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 46  ILISRDGPDSNVLKFKPPMVFTTQDADRLVETLDRVL 156
           IL++ DGP +N+LK KPP+ F   +    V  LD+VL
Sbjct: 426 ILLNADGPHTNILKIKPPLCFNENNILETVTALDQVL 462


>U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical
           protein T09B4.8 protein.
          Length = 444

 Score = 34.7 bits (76), Expect = 0.027
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +1

Query: 34  REENILISRDGPDSNVLKFKPPMVFTTQDADRLVETL 144
           + + +LI + G   NVL+ KPPM  T +D D  V+ +
Sbjct: 400 KNQGLLIGKGGIHGNVLRIKPPMCITKKDVDFAVDII 436


>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
            F57F4.4 protein.
          Length = 2090

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 298  CNSINKLEDCKY**NNELIVTCCCN 372
            CNS+   ++CK   N+  +  CCCN
Sbjct: 1350 CNSLELYDNCKPVWNDNQVTGCCCN 1374


>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
            interacting proteinprotein 1 protein.
          Length = 2153

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 298  CNSINKLEDCKY**NNELIVTCCCN 372
            CNS+   ++CK   N+  +  CCCN
Sbjct: 1350 CNSLELYDNCKPVWNDNQVTGCCCN 1374


>Z81139-3|CAB03482.1|  520|Caenorhabditis elegans Hypothetical
           protein W05H5.3 protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
 Frame = -3

Query: 218 LIGVTSTSNLIFDILVSSNSPKTLSRVSTSLSASCVVNTMGGLN------FNTLLSGPSR 57
           LI    T  +   IL  S   + L R+++SLS +  +   G L       F  + +   +
Sbjct: 293 LIRKKRTKKISVFILKYSEKTEKLPRIASSLSYTFPIVPRGWLRRAVYWAFPPMRNDDQK 352

Query: 56  LINIFSSLILLTTCFA 9
            + +FS L +LT CFA
Sbjct: 353 AVRLFSFLQILTACFA 368


>U28928-11|AAA68342.3|  824|Caenorhabditis elegans Hypothetical
           protein C44B7.11 protein.
          Length = 824

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -3

Query: 266 FCTELLMTFSFFGTSVLIGVTSTSNLIFDILV--SSNSPKTLSRVSTSLSASCVVNTMGG 93
           F T L +  SF G ++ I  T     IF  ++  SS +P+       + SA C+V ++GG
Sbjct: 473 FNTILTLILSFPGCAMAIYTTEMLLSIFIPIMGRSSYNPEPAVSFFVAFSAGCIVLSLGG 532

Query: 92  L 90
           L
Sbjct: 533 L 533


>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
            K10D2.3 protein.
          Length = 1425

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 23/90 (25%), Positives = 44/90 (48%)
 Frame = +1

Query: 7    EAKHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVETLDRVLGELDDTRISN 186
            + K  +NR ++ N++I  +       K K      ++ A++L ETL ++  +       N
Sbjct: 782  KGKKFINRWKKANVIILSEDSSEIDEKTKAADSNVSEIAEKLEETL-KISSQ------KN 834

Query: 187  IKLEVLVTPINTEVPKKENVIKSSVQKAIK 276
            I + V   P++TE+ K E + K S +  +K
Sbjct: 835  IDVAVTSMPVSTEI-KPEPITKLSNEAPVK 863


>AF016656-1|AAB66040.1|  332|Caenorhabditis elegans Hypothetical
           protein C35A11.3 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -3

Query: 266 FCT-ELLMTFSFFGTSVLIGVTSTSNLIFDILVSSNSPKTLSRVSTSLSASCVVNTMGGL 90
           FCT E   T +   T+V    T+TS+     + SSNSP T     T+  AS   +T G L
Sbjct: 32  FCTRETSTTTATESTTVSTSTTATSSTPTTEIFSSNSPST----ETTTCASPTTSTNGHL 87

Query: 89  NFNT 78
              T
Sbjct: 88  TSTT 91


>AF016428-1|AAO26001.1|  330|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 66 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = -3

Query: 266 FCTELLMTFSFFGTSVLIGVTSTSNLIFDILVSSNSPKTLSRVSTSLSA 120
           FC      +SF  T++  G T+  +++ D L+ + +P+ L + +T+ +A
Sbjct: 143 FCGLAFALYSFLPTTIWFGFTNEVHILNDTLMRTRNPE-LVKTATNTTA 190


>AF016674-3|AAB66128.1|  558|Caenorhabditis elegans Hypothetical
           protein C03H5.5 protein.
          Length = 558

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +1

Query: 115 QDADRLVETL-DRVLGELDDTRISNIKLEVLVTPINTEVPKKENVIKSSVQKAI 273
           ++A+R ++ L D+  G L+ T+  NI L +   P  +  P K+N  K +  K +
Sbjct: 29  KEAERQLKVLLDKQTGSLEITKPENIGLFITPEPQTSRRPIKDNSAKPANSKTM 82


>AL117204-43|CAB55131.2|  917|Caenorhabditis elegans Hypothetical
           protein Y116A8C.26a protein.
          Length = 917

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 97  PMVFTTQDADRLVETLDRVLGELDDTRISNIKLEVLVTPIN 219
           P   +T +   ++ET DRV   L DT   NI L VLV  ++
Sbjct: 719 PSSSSTVNRPPVMET-DRVAASLTDTESENIPLRVLVLVVS 758


>AL117203-7|CAB55109.1|  191|Caenorhabditis elegans Hypothetical
           protein Y48C3A.10 protein.
          Length = 191

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +2

Query: 164 WMTQEY--RILNWKY*SHRSTLKFRKRRTSLKVLYKRQSRLDK 286
           WM +E   R   W+Y S RST+K   R+      Y    R D+
Sbjct: 29  WMKRERLNRFTAWQYASERSTVKGAYRKEDKIFAYLNMQRQDE 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,953,105
Number of Sequences: 27780
Number of extensions: 170330
Number of successful extensions: 463
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)