Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11a08
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 191 3e-49
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 191 3e-49
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 187 7e-48
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 187 7e-48
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 104 5e-23
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 104 7e-23
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 80 2e-15
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 77 9e-15
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 77 9e-15
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 76 2e-14
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 75 5e-14
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 75 5e-14
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 75 5e-14
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 73 2e-13
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 73 2e-13
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 65 5e-11
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 65 5e-11
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 64 1e-10
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 59 2e-09
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 59 2e-09
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 59 2e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 58 6e-09
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 57 1e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 57 1e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 57 1e-08
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 55 5e-08
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 55 5e-08
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 55 5e-08
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 54 7e-08
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 54 7e-08
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 54 1e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 54 1e-07
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 51 7e-07
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 49 4e-06
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 49 4e-06
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 42 3e-04
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 37 0.015
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 33 0.19
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.33
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.43
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.57
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 0.76
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 4.0
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.0
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 28 5.3
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 28 7.0
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 28 7.0
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 27 9.3
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 9.3
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 9.3
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 9.3
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 191 bits (466), Expect = 3e-49
Identities = 89/118 (75%), Positives = 105/118 (88%)
Frame = +3
Query: 324 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 503
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 504 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 677
+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+ EDIR+L
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKL 141
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 191 bits (466), Expect = 3e-49
Identities = 89/118 (75%), Positives = 105/118 (88%)
Frame = +3
Query: 324 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 503
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 504 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 677
+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+ EDIR+L
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKL 141
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 187 bits (455), Expect = 7e-48
Identities = 89/127 (70%), Positives = 108/127 (85%)
Frame = +3
Query: 297 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 476
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 477 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 656
GKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+V
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Query: 657 REDIRQL 677
R+D R+L
Sbjct: 138 RDDQRKL 144
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 187 bits (455), Expect = 7e-48
Identities = 89/127 (70%), Positives = 108/127 (85%)
Frame = +3
Query: 297 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 476
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 477 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 656
GKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+V
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Query: 657 REDIRQL 677
R+D R+L
Sbjct: 138 RDDQRKL 144
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 104 bits (250), Expect = 5e-23
Identities = 45/114 (39%), Positives = 77/114 (67%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 515
F+D L +LL GI+ G+EKPS IQ+ +I + G+D++A+A++GTGKT + I ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 516 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 677
I +++ QA+++ PTRELA Q ++ + L H+ K GGT++R+DI +L
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRL 158
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 104 bits (249), Expect = 7e-23
Identities = 52/107 (48%), Positives = 69/107 (64%)
Frame = +3
Query: 345 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 524
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G+DV Q+Q+G+GKT I ILQ ID
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 525 SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 665
Q ++LAP R +AQ+ + + +LG +LN C+G E+
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAEN 106
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 515
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 516 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 677
++ E + + TRELA QI K +L K GG +++D +L
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERL 157
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 515
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 516 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 677
++ E + + TRELA QI K +L K GG +++D +L
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERL 157
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 515
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 516 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 677
++ E + + TRELA QI K +L K GG +++D +L
Sbjct: 102 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERL 156
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/113 (39%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Frame = +3
Query: 327 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 500
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 501 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 656
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+
Sbjct: 268 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 320
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/113 (39%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Frame = +3
Query: 327 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 500
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 501 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 656
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+
Sbjct: 293 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 345
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/113 (39%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Frame = +3
Query: 327 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 500
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 501 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 656
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+
Sbjct: 677 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 729
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 77.4 bits (182), Expect = 9e-15
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 512
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 513 QID-TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 662
++ +AL+++PTRELA Q KVV LG +C +GG + E
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEE 135
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 77.4 bits (182), Expect = 9e-15
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 512
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 513 QID-TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 662
++ +AL+++PTRELA Q KVV LG +C +GG + E
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEE 135
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 76.2 bits (179), Expect = 2e-14
Identities = 41/117 (35%), Positives = 65/117 (55%)
Frame = +3
Query: 306 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 485
D + D ++F ++ + + L G+ KPS IQQ A+ +QG+DVI A++G+GKT
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
Query: 486 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 656
F+I +LQ + + L+L PTRELA QI + ALG + +GG ++
Sbjct: 96 GAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDM 152
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 74.9 bits (176), Expect = 5e-14
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
Frame = +3
Query: 231 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 404
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 405 AIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELA 575
IQQ I + G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA
Sbjct: 173 PIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELA 232
Query: 576 QQIQKVVIALGDHLNAKCHACIGGTNVR 659
Q+ +V L + + C GG +++
Sbjct: 233 IQVFQVFRKLSTFIQLEVCLCAGGLDLK 260
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 74.9 bits (176), Expect = 5e-14
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Frame = +3
Query: 207 ERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 383
E + D E+ G D+ S D P P + D + + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQT 106
Query: 384 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 563
+ + +Q I ++G D++ A++GTGKT F+I ILQ++ ALIL PT
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPT 166
Query: 564 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 677
RELA QI + ALG + KC +GG ++ R+L
Sbjct: 167 RELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQAREL 204
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 74.9 bits (176), Expect = 5e-14
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Frame = +3
Query: 207 ERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 383
E + D E+ G D+ S D P P + D + + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQT 106
Query: 384 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 563
+ + +Q I ++G D++ A++GTGKT F+I ILQ++ ALIL PT
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPT 166
Query: 564 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 677
RELA QI + ALG + KC +GG ++ R+L
Sbjct: 167 RELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQAREL 204
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/106 (33%), Positives = 64/106 (60%)
Frame = +3
Query: 333 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 512
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 513 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 650
+D+ Q +I+ PTRE++ QI++ V + A+ +GG+
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGS 127
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/106 (33%), Positives = 64/106 (60%)
Frame = +3
Query: 333 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 512
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 513 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 650
+D+ Q +I+ PTRE++ QI++ V + A+ +GG+
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGS 127
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 68.9 bits (161), Expect = 3e-12
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 10/123 (8%)
Frame = +3
Query: 327 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 506
+ +++ +E+ + + G+ +P+ IQ++AI +Q RDVI A++G+GKTA F + +
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPL 359
Query: 507 LQQIDTSIRECQ----------ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 656
L I TS+ + + A+I+APTRELAQQI++ G L K + IGG +
Sbjct: 360 LVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGAS- 417
Query: 657 RED 665
RED
Sbjct: 418 RED 420
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 64.9 bits (151), Expect = 5e-11
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Frame = +3
Query: 312 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 491
D + ++T+ + +++ + + + KP++IQ +AI + GRDVI A++G+GKT
Sbjct: 298 DCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLA 357
Query: 492 FSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 656
F + + + I + E A+ILAPTRELA Q K L K GG +
Sbjct: 358 FLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGI 417
Query: 657 REDIRQL 677
E I L
Sbjct: 418 SEQIADL 424
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 64.9 bits (151), Expect = 5e-11
Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Frame = +3
Query: 294 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 473
P + D++ +TF D L E +L+ I G+EK + +Q+ I ++ ++++ +A++G
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTG 136
Query: 474 TGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKVVIALGDHL 617
+GKT F I ++Q++ D S+ A+I+APT+EL QI K+ + L L
Sbjct: 137 SGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKLFVKLSQAL 190
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 63.7 bits (148), Expect = 1e-10
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 515
F+D L L G+ + KP+ IQ+ I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 516 IDTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 656
+ + ALI++PTRELA Q + A+G H C IGG++V
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDV 188
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 59.7 bits (138), Expect = 2e-09
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 384 YG-FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----A 545
YG F+KP+ IQ + + GRD+I+ A++G+GKT F + L I +
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 546 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 677
L+L PTRELAQQ+Q+V I L K GG + R L
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDL 249
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Frame = +3
Query: 330 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 509
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 510 QQI--DTSIREC-------QALILAPTRELAQQI 584
++ D ++ + +IL PTRELA QI
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Frame = +3
Query: 330 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 509
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 510 QQI--DTSIREC-------QALILAPTRELAQQI 584
++ D ++ + +IL PTRELA QI
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Frame = +3
Query: 330 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 509
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 510 QQI--DTSIREC-------QALILAPTRELAQQI 584
++ D ++ + +IL PTRELA QI
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 58.0 bits (134), Expect = 6e-09
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Frame = +3
Query: 363 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSIR 533
LL+ + GF + IQ ++I P ++G+DV+A A++G+GKT F +I +L +++
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 534 E-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 653
+I++PTREL+ Q V+ L + N +GG+N
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSN 179
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 57.2 bits (132), Expect = 1e-08
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Frame = +3
Query: 201 SSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKE------E 362
SS ++SE+ E + P K+Q G D G + + D K+ E
Sbjct: 107 SSAKKSENATETTTEKP-KEQKKRKGGENGDTGKPKKSKKEASKKTDISAWKQFYFLPNE 165
Query: 363 LLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI------- 518
+L I GF +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 166 VLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDS 225
Query: 519 ----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 647
T +R +ALI+APTREL QI K + AL + +GG
Sbjct: 226 QETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 272
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Frame = +3
Query: 327 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 506
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 138 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 197
Query: 507 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 641
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 198 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 257
Query: 642 GG-TNVREDIRQL 677
GG N R+ + +L
Sbjct: 258 GGRENYRDQVNRL 270
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Frame = +3
Query: 327 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 506
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 122 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 181
Query: 507 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 641
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 182 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 241
Query: 642 GG-TNVREDIRQL 677
GG N R+ + +L
Sbjct: 242 GGRENYRDQVNRL 254
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Frame = +3
Query: 327 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 506
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 119 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 178
Query: 507 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 641
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 179 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 238
Query: 642 GG-TNVREDIRQL 677
GG N R+ + +L
Sbjct: 239 GGRENYRDQVNRL 251
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Frame = +3
Query: 330 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 509
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 510 QQI--DTSIREC-------QALILAPTRELAQQI 584
++ + + + +IL PTREL QI
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Frame = +3
Query: 330 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 509
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 510 QQI--DTSIREC-------QALILAPTRELAQQI 584
++ + + + +IL PTREL QI
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Frame = +3
Query: 330 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 509
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 510 QQI--DTSIREC-------QALILAPTRELAQQI 584
++ + + + +IL PTREL QI
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Frame = +3
Query: 321 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 500
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 501 SILQQI----DTSIRE---C--QALILAPTRELAQQI 584
I+ ++ D + C + +IL PTRELA QI
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Frame = +3
Query: 321 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 500
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 501 SILQQI----DTSIRE---C--QALILAPTRELAQQI 584
I+ ++ D + C + +IL PTRELA QI
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Frame = +3
Query: 387 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-------- 542
GFEKPS IQ + + G+D I +Q+G+GKT F + L ID + + +
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 543 ---ALILAPTRELAQQIQ 587
L+L+PTRELAQQI+
Sbjct: 163 SPFVLVLSPTRELAQQIE 180
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 53.6 bits (123), Expect = 1e-07
Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 17/108 (15%)
Frame = +3
Query: 312 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTA 488
D Q + F D++L E + I G+++P+ +Q+ +I P +QG RD+++ AQ+G+GKTA
Sbjct: 160 DVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSI-PALQGGRDLMSCAQTGSGKTA 218
Query: 489 TFSI----SILQQ----IDTSI-----RECQ---ALILAPTRELAQQI 584
F + +ILQ + S+ R+ Q AL+L+PTREL+ QI
Sbjct: 219 AFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 266
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 52.8 bits (121), Expect = 2e-07
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 15/132 (11%)
Frame = +3
Query: 327 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 503
+ +F +M + LL + G P+AIQ + I + GRD+I A +G+GKT TF +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLP 247
Query: 504 IL-----QQIDTSIRECQ---ALILAPTRELAQQIQKVVIALGDHL------NAKCHACI 641
++ Q++ + LI+ P+RELA+QI ++I + D L + CI
Sbjct: 248 LVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCI 307
Query: 642 GGTNVREDIRQL 677
GG + E + +
Sbjct: 308 GGVPIGEQAKDV 319
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Frame = +3
Query: 333 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF----SI 500
+F + + L+ I +E+P+ IQ AI + GRDV+ A++G+GKTA + +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 501 SILQQIDTSIRECQ-ALILAPTRELAQQI 584
I+ Q D E A+I+ PTRELA Q+
Sbjct: 326 HIMDQPDLKAGEGPVAVIVVPTRELAIQV 354
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 51.2 bits (117), Expect = 7e-07
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Frame = +3
Query: 375 IYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI----------- 518
I+ + F +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETE 62
Query: 519 DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 647
T +R +ALI+APTREL QI K + AL + +GG
Sbjct: 63 STEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 105
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 48.8 bits (111), Expect = 4e-06
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Frame = +3
Query: 333 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 509
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 510 QQI------DTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 659
++ D + + + LI+APTREL Q L KC GG +
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRN 855
Query: 660 EDIRQL 677
+++ L
Sbjct: 856 ANVQHL 861
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 48.8 bits (111), Expect = 4e-06
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Frame = +3
Query: 333 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 509
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 510 QQI------DTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 659
++ D + + + LI+APTREL Q L KC GG +
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRN 855
Query: 660 EDIRQL 677
+++ L
Sbjct: 856 ANVQHL 861
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Frame = +3
Query: 324 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 503
++ F D ++ LL + +PS IQ ++I + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 504 ILQQI----------DTSIRECQALILAPTRELAQQ 581
++ +I ++ + A++L PTRELA Q
Sbjct: 184 VIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +3
Query: 447 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 617
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 618 NAKCHACIGGTNVREDIR 671
N GG V ++I+
Sbjct: 108 NLTVETVTGGQKVDKNIK 125
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Frame = +3
Query: 318 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 497
D + ++ + L +L + + IQ I + G DV+ QA++ GKTA F
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 498 ISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQKVV 596
+ I+ +I +T + Q ALILAPTRELA QI + +
Sbjct: 437 LPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEAL 479
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 336 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 512
F++ + EL + + + P+A+Q AI + G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 36.7 bits (81), Expect = 0.015
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +3
Query: 399 PSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELA 575
PS + P ++ RDV A +G+GKT + + +L + + + QA+IL P + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLV 201
Query: 576 QQIQKVVIALGDHLN-AKCHACIGGTNVREDIRQL 677
QI D AK + G + ++ RQL
Sbjct: 202 AQIVDEFKRWNDESGVAKVVSLSGANDFEKEARQL 236
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 402 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQ- 578
+A+QQ +I +GR ++ +A +G GKT F ++ I+ +++ Q+ T+
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALKNRQSNCFEYTKPSPSI 173
Query: 579 QIQKVVIALGDHLNAKCHACIG 644
I AL D L +C +G
Sbjct: 174 LIMASTSALVDQLFNRCELILG 195
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 450 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 629
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 630 HA-CIGGTNVREDI 668
H + TN D+
Sbjct: 142 HEHALMDTNEYRDV 155
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 387 GFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 563
GF+ + IQ + + + VI A +G+GKTA +++L+ + + E +A+ + P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPM 1376
Query: 564 RELAQQI 584
++A ++
Sbjct: 1377 EDMATKV 1383
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 291 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 193
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.1 bits (67), Expect = 0.76
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQ-QI 584
+QQ +I +GR ++ +A +G GKT F ++ I+ ++ Q+ T+ I
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALENRQSNCFESTKPSPSILI 75
Query: 585 QKVVIALGDHLNAKCHACIG 644
AL D L +C +G
Sbjct: 76 MASTSALVDQLFNRCELILG 95
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 450 VIAQAQSGTGKTATFSISILQQIDTSIREC 539
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 261 DPSMAHFWNPLANLLTFFQTNKT 193
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 28.3 bits (60), Expect = 5.3
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +3
Query: 402 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALI-LAPTRELAQ 578
+A+QQ++I R ++ A +G GKT F ++ I+ ++RE L ++ T
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAF---LIPAIEIALRERPLLTNISTTPSPTI 172
Query: 579 QIQKVVIALGDHLNAKCHACIGGTNVREDI 668
I +L + L +C +G ++ EDI
Sbjct: 173 LILANTNSLVEQLFNRCEVLLGLIDM-EDI 201
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +3
Query: 204 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 344
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 411 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQ 581
Q+ +QG++ I A +G+GKT + I + ++ E +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 582 IQKVVIALGDHL 617
+ + DH+
Sbjct: 357 QAASISSYLDHV 368
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 411 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQ 581
Q+ +QG++ I A +G+GKT + I + ++ E +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 582 IQKVVIALGDHL 617
+ + DH+
Sbjct: 357 QAASISSYLDHV 368
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 561 WEPGSKLDIHECLYRFVVESI*RK 490
WEPG+K H Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 504 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 626
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 504 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 626
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 504 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 626
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 112 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,317,651
Number of Sequences: 27780
Number of extensions: 331831
Number of successful extensions: 939
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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