Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11a07
(683 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 35 6e-04
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 28 0.095
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 28 0.095
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 1.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 24 1.2
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 23 2.1
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 3.6
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 22 4.7
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 35.1 bits (77), Expect = 6e-04
Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 4/172 (2%)
Frame = +3
Query: 114 IVKNITMRSQXXXXXXXXXXACGVLTSAQNSSTIAPVTEPTQELVNYEALKYIVGRPFNL 293
I++N+ S A G SA+ + + + PT + ++ L G NL
Sbjct: 546 IIENVERMSDQATYTCVARNAQGY--SARGTLEVQVMVPPTIQQFSFTKLPMNAGEFANL 603
Query: 294 NCTLAVPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLK 473
C + I W +G +G+ + ++ ++ I + G Y C +
Sbjct: 604 QCIVPTGDLPLNIRWSYPGEEMGGSSGVLAK-KVADRVSMLMISVITARHA-GEYVCTAE 661
Query: 474 NQTGHIK-AWMVTGNVHAKMT---KDANVVEGQNIKITCKLIGKPYSEVTWK 617
N G + +T NV + D +G + ++ CK G P +VTWK
Sbjct: 662 NAAGTASHSTTLTVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWK 713
Score = 31.9 bits (69), Expect = 0.006
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 3/151 (1%)
Frame = +3
Query: 198 QNSSTIAPVTEPTQELVNYEALKYIVGRPFNLNCTL-AVPLDSFEIVWKKNSVPLG-EVA 371
++ T+ VT P + GRP C + P+ + + W K+ PLG E A
Sbjct: 296 ESVETVLTVTAPLGAEIEPSTQTIDFGRPATFTCNVRGNPIKT--VSWLKDGKPLGLEEA 353
Query: 372 GLK-ERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTGHIKAWMVTGNVHAKMTKDANV 548
L+ E + ++KG+ +Q R N+ + T LK G + + + + +
Sbjct: 354 VLRIESVKKEDKGM-YQCFVR-NDQESAQATAELK-LGGRFEPPQIR-----QAFAEETL 405
Query: 549 VEGQNIKITCKLIGKPYSEVTWKYKKDELDN 641
G ++ + C G P E+TW+ L N
Sbjct: 406 QPGPSMFLKCVASGNPTPEITWELDGKRLSN 436
Score = 31.5 bits (68), Expect = 0.008
Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +3
Query: 327 EIVWKKNSVPLGEVAGLKE-RYELQNKGLTFQIK-GRSNEDDYGNYTCGLKNQTG---HI 491
EI W+ + L L+ +Y N + + ++ +D G Y C ++ G H
Sbjct: 424 EITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKCIAASKVGSAEHS 483
Query: 492 KAWMVTGNVHAKMTKDANVVEGQNIKITCKLIGKPYSEVTWK 617
V G + +V G+ +++TC + G P + W+
Sbjct: 484 ARLNVYGLPFIRHMDKKAIVAGETLRVTCPVAGYPIESIVWE 525
Score = 28.3 bits (60), Expect = 0.072
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 558 QNIKITCKLIGKPYSEVTWKYK 623
+++K+ C +G P EVTWK +
Sbjct: 1292 EDVKLPCLAVGVPAPEVTWKVR 1313
Score = 25.8 bits (54), Expect = 0.38
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +3
Query: 303 LAVPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQT 482
LAV + + E+ WK G V +R +G F IK + D G Y+C ++N
Sbjct: 1299 LAVGVPAPEVTWKVR----GAVLQSSDRLRQLPEGSLF-IK-EVDRTDAGEYSCYVENTF 1352
Query: 483 GH 488
GH
Sbjct: 1353 GH 1354
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 27.9 bits (59), Expect = 0.095
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Frame = +3
Query: 270 IVGRPFNLNCTLA-VPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDD 446
+ G L C +A P++ EI W++ + L + R ++ G T I + D
Sbjct: 531 VAGETLRLKCPVAGYPIE--EIKWERANRELPDDL----RQKVLPDG-TLVITSVQKKGD 583
Query: 447 YGNYTCGLKNQTGHI-----KAWMVTGNVHAKMTKDANVVEGQNIKITCKL-IGKPYSEV 608
G YTC +N+ GH ++ + T + EG + C + G P +
Sbjct: 584 AGVYTCSARNKQGHSARRSGDVAVIVPPIIEPFTFQEGLSEGMRTRTVCGVAAGDPPLTI 643
Query: 609 TW 614
+W
Sbjct: 644 SW 645
Score = 26.6 bits (56), Expect = 0.22
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 6/66 (9%)
Frame = +3
Query: 435 NEDDYGNYTCGLKNQTG---HIKAWMVTGNVHAKMTK---DANVVEGQNIKITCKLIGKP 596
N +D G Y C ++ G A + GN + + + G + + C G P
Sbjct: 390 NREDRGMYQCIVRRSEGDTAQASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNP 449
Query: 597 YSEVTW 614
+VTW
Sbjct: 450 TPQVTW 455
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 444 DYGNYTCGLKNQTGHIK 494
D G+YTC ++N G+ K
Sbjct: 1378 DGGDYTCQVENAQGNDK 1394
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 27.9 bits (59), Expect = 0.095
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Frame = +3
Query: 270 IVGRPFNLNCTLA-VPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDD 446
+ G L C +A P++ EI W++ + L + R ++ G T I + D
Sbjct: 531 VAGETLRLKCPVAGYPIE--EIKWERANRELPDDL----RQKVLPDG-TLVITSVQKKGD 583
Query: 447 YGNYTCGLKNQTGHI--KAWMVTGNVHAKM---TKDANVVEGQNIKITCKL 584
G YTC +N+ GH ++ V V K+ T D ++ G+ +TC +
Sbjct: 584 AGVYTCSARNKQGHSARRSGDVAVIVPPKISPFTADRDLHLGERTTLTCSV 634
Score = 26.6 bits (56), Expect = 0.22
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 6/66 (9%)
Frame = +3
Query: 435 NEDDYGNYTCGLKNQTG---HIKAWMVTGNVHAKMTK---DANVVEGQNIKITCKLIGKP 596
N +D G Y C ++ G A + GN + + + G + + C G P
Sbjct: 390 NREDRGMYQCIVRRSEGDTAQASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNP 449
Query: 597 YSEVTW 614
+VTW
Sbjct: 450 TPQVTW 455
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 444 DYGNYTCGLKNQTGHIK 494
D G+YTC ++N G+ K
Sbjct: 1374 DGGDYTCQVENAQGNDK 1390
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 267 YIVGRPFNLNCTL 305
YI G PFN NC++
Sbjct: 676 YIGGNPFNCNCSM 688
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +3
Query: 555 GQNIKITCKLIGKPYSEVTWKYKKDELD 638
G N++I C + G P + W+ +L+
Sbjct: 325 GDNVEIKCDVTGTPPPPLVWRRNGADLE 352
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 227 RAHPRTGQL*GLEVHRWTPVQFEL 298
R P + L LEV RW P++ L
Sbjct: 112 RTEPLSPHLLNLEVERWRPLRSRL 135
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 22.6 bits (46), Expect = 3.6
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -2
Query: 367 TSPRGTLFFFHTISNESSGTARVQFKLNGRPTMYFKAS*LTSSWVGSVTG 218
TS R +F+ S+E+S A +FK + F + W+ S G
Sbjct: 23 TSHRPAWWFWTATSHEASAPAEGKFKTVSKVPGPFSLPIFGTRWIFSCIG 72
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +2
Query: 188 YECPKLVNDCSGHRAHPRTGQL*GLEVHRWTPV 286
+EC K N C HR R L + +W+ +
Sbjct: 98 FECSKTSNPCLPHRNSDR-----DLNIRKWSSI 125
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,697
Number of Sequences: 438
Number of extensions: 3533
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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