BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11a06
(732 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 23 3.9
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 5.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 5.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 5.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 5.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 5.2
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 5.2
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 5.2
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 5.2
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 5.2
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 5.2
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 5.2
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.2
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.2
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.2
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.2
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 5.2
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.2
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.2
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.8
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 6.8
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 632 VKSIEFPMDRLHPHNGRGYAYVEFNNADEA 721
V+S ++ ++ + GYA + +NNAD++
Sbjct: 190 VQSFDYNNTWVYIADVEGYALIIYNNADDS 219
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.2
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKK--KSVLPLSND 478
N+ ++ R+ RE+ RDR K K + LSN+
Sbjct: 52 NEREYREYRETSRERSRDRKERERSKEPKIISSLSNN 88
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.2
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKK--KSVLPLSND 478
N+ ++ R+ RE+ RDR K K + LSN+
Sbjct: 52 NEREYREYRETSRERSRDRKERERSKEPKIISSLSNN 88
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.2
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKK--KSVLPLSND 478
N+ ++ R+ RE+ RDR K K + LSN+
Sbjct: 52 NEREYREYRETSRERSRDRKERERSKEPKIISSLSNN 88
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.2
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKK--KSVLPLSND 478
N+ ++ R+ RE+ RDR K K + LSN+
Sbjct: 52 NEREYREYRETSRERSRDRKERERSKEPKIISSLSNN 88
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSRE 78
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSRE 78
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSRE 78
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSRE 78
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSRE 78
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSRE 78
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 52 NEREYREYRETSRERSRDRRERGRSRE 78
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSRE 327
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSRE 327
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSRE 327
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSRE 327
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSRE 327
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSRE 327
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 301 NEREYREYRETSRERSRDRRERGRSRE 327
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGEKKK 454
N+ ++ R+ RE+ RDR G ++
Sbjct: 300 NEREYREYRETSRERSRDRRGRGRSRE 326
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 368 SPNKSPLKDRRDADREKIRDRSPTGEK 448
SPN SP + A I RSP G +
Sbjct: 740 SPNASPSPAEQCASTTTITARSPQGSQ 766
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,288
Number of Sequences: 438
Number of extensions: 2700
Number of successful extensions: 26
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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