Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10p15
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 328 3e-90
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 324 4e-89
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 317 4e-87
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 317 4e-87
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 317 6e-87
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 316 8e-87
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 227 5e-60
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 227 5e-60
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 158 3e-39
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 156 2e-38
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 156 2e-38
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 155 2e-38
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 153 9e-38
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 153 1e-37
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 150 8e-37
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 150 8e-37
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 149 3e-36
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 149 3e-36
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 149 3e-36
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 147 8e-36
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 146 1e-35
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 146 1e-35
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 146 2e-35
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 125 4e-29
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 120 1e-27
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 120 1e-27
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 28 7.5
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 328 bits (805), Expect = 3e-90
Identities = 155/200 (77%), Positives = 166/200 (83%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MREIVH+QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEAS----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
GGKYVPRA L+DLEPGTMD+VR+G +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -GGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VLDVVRKE E+CDCLQGFQ KIREEYPDRIM T+SVVPSPK
Sbjct: 115 NVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPK 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VSDTVVEPYNA LS+HQLVE
Sbjct: 175 VSDTVVEPYNATLSVHQLVE 194
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 324 bits (796), Expect = 4e-89
Identities = 152/200 (76%), Positives = 166/200 (83%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MREIVH+QAGQCGNQIGAKFWE+IS+EHGI P G Y+G SDLQLERI+VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEAN----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
GGKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -GGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VLDVVRKE E CDCLQGFQ KIREEYPDRIM+++SVVPSPK
Sbjct: 115 NVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPK 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VSDTVVEPYNA LS+HQLVE
Sbjct: 175 VSDTVVEPYNATLSVHQLVE 194
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 317 bits (779), Expect = 4e-87
Identities = 150/200 (75%), Positives = 164/200 (82%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MREIVH+QAGQCGNQIG+KFWE+IS+EHGIDP+G Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAG----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
KYVPRA+L+DLEPGTMD+VRSG +GQLFRPDN+VFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VLDVVRKE E+ DCLQGFQ KIREEYPDRIMNT+SVVPSPK
Sbjct: 115 NVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPK 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VSDTVVEPYNA LS+HQLVE
Sbjct: 175 VSDTVVEPYNATLSVHQLVE 194
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 317 bits (779), Expect = 4e-87
Identities = 150/200 (75%), Positives = 164/200 (82%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MREIVH+QAGQCGNQIG+KFWE+IS+EHGIDP+G Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAG----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
KYVPRA+L+DLEPGTMD+VRSG +GQLFRPDN+VFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VLDVVRKE E+ DCLQGFQ KIREEYPDRIMNT+SVVPSPK
Sbjct: 115 NVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPK 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VSDTVVEPYNA LS+HQLVE
Sbjct: 175 VSDTVVEPYNATLSVHQLVE 194
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 317 bits (778), Expect = 6e-87
Identities = 147/200 (73%), Positives = 164/200 (82%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MREIVH+QAGQCGNQIG+KFWE+IS+EHGI P G ++G +DLQLERI VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEAN----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
GKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -NGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VLDV+RKE E CDCLQGFQ KIREEYPDRIM+++SVVPSPK
Sbjct: 115 NVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPK 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VSDTVVEPYNA LS+HQLVE
Sbjct: 175 VSDTVVEPYNATLSVHQLVE 194
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 316 bits (777), Expect = 8e-87
Identities = 147/200 (73%), Positives = 164/200 (82%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MREIVH+QAGQCGNQIG+KFWE+IS+EHGI P G ++G SDLQLERI VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEAN----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
GKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -NGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VLDV+RKE E CDCLQGFQ KIREE+PDRIM+++SVVPSPK
Sbjct: 115 NVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPK 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VSDTVVEPYNA LS+HQLVE
Sbjct: 175 VSDTVVEPYNATLSVHQLVE 194
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 227 bits (556), Expect = 5e-60
Identities = 107/200 (53%), Positives = 141/200 (70%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
M+EI+++Q GQCGNQIGAKFWE ISEEHG+ G Y+G + QLERI+ YY E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEME----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
G KYVPRAIL+DL+P +++ VRS YG+LF P+N V G+SGAGNNW++G+Y +GAE+VD
Sbjct: 56 -GRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVD 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VL V+R+E E D L+GFQ K+REEY D+ ++T S++PS K
Sbjct: 115 KVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAK 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VSDTVVEPYNA+LS+ L++
Sbjct: 175 VSDTVVEPYNAILSMPHLMD 194
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 227 bits (556), Expect = 5e-60
Identities = 107/200 (53%), Positives = 141/200 (70%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
M+EI+++Q GQCGNQIGAKFWE ISEEHG+ G Y+G + QLERI+ YY E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEME----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
G KYVPRAIL+DL+P +++ VRS YG+LF P+N V G+SGAGNNW++G+Y +GAE+VD
Sbjct: 56 -GRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVD 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VL V+R+E E D L+GFQ K+REEY D+ ++T S++PS K
Sbjct: 115 KVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAK 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VSDTVVEPYNA+LS+ L++
Sbjct: 175 VSDTVVEPYNAILSMPHLMD 194
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 158 bits (384), Expect = 3e-39
Identities = 78/200 (39%), Positives = 115/200 (57%), Gaps = 1/200 (0%)
Frame = +2
Query: 110 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTS-DLQLERISVYYNEASVATAE 286
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESM----- 60
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
GK+VPRAI +DLEP +D +R+G YG LF PD + G+ A NN+A+GHYT G EL+D
Sbjct: 61 -NGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELID 119
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VLD +RK+ ENC+ LQGF ++ E+ + +SV P+P+
Sbjct: 120 VVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQ 179
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VS +VVEPYN++L+ H +E
Sbjct: 180 VSTSVVEPYNSILTTHTTLE 199
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 156 bits (378), Expect = 2e-38
Identities = 74/200 (37%), Positives = 112/200 (56%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MRE++ + GQ G QIG WE+ EHGI P G S + E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTG----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -SGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VLD +R+ +NC LQGF ++ +Y + +S+ P+P+
Sbjct: 115 TVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VS VVEPYN++L+ H +E
Sbjct: 175 VSTAVVEPYNSILTTHTTLE 194
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 156 bits (378), Expect = 2e-38
Identities = 74/200 (37%), Positives = 112/200 (56%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MRE++ + GQ G QIG WE+ EHGI P G S + E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTG----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -SGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VLD +R+ +NC LQGF ++ +Y + +S+ P+P+
Sbjct: 115 TVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VS VVEPYN++L+ H +E
Sbjct: 175 VSTAVVEPYNSILTTHTTLE 194
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 155 bits (377), Expect = 2e-38
Identities = 73/200 (36%), Positives = 110/200 (55%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTG----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VLD +R+ +NC LQGF ++ +Y + +S+ P+P+
Sbjct: 115 TVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VS VVEPYN++L+ H +E
Sbjct: 175 VSTAVVEPYNSILTTHTTLE 194
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 153 bits (372), Expect = 9e-38
Identities = 72/200 (36%), Positives = 109/200 (54%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTG----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
VLD +R+ +NC LQGF ++ +Y + +S+ P+P+
Sbjct: 115 TVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
V VVEPYN++L+ H +E
Sbjct: 175 VCTAVVEPYNSILTTHTTLE 194
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 153 bits (371), Expect = 1e-37
Identities = 79/200 (39%), Positives = 112/200 (56%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MREIV + GQ G QIG WE+ EHGI P G+ + +E S YN T
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQS--YNTFFSETPS 58
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
GK+VPRAI +DLEP +D VR+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 59 --GKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELID 116
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
V+D VR+ E C LQGF ++ +Y + +S+ P+P+
Sbjct: 117 VVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQ 176
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
+S ++VEPYN++L+ H +E
Sbjct: 177 ISTSMVEPYNSLLTTHTTLE 196
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 150 bits (364), Expect = 8e-37
Identities = 71/200 (35%), Positives = 109/200 (54%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MRE++ + GQ G QIG WE+ EHGI P G + + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTG----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
LD +R+ +NC LQGF ++ +Y + +S+ P+P+
Sbjct: 115 TTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VS VVEPYN++L+ H +E
Sbjct: 175 VSTAVVEPYNSILTTHTTLE 194
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 150 bits (364), Expect = 8e-37
Identities = 71/200 (35%), Positives = 109/200 (54%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MRE++ + GQ G QIG WE+ EHGI P G + + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTG----- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
LD +R+ +NC LQGF ++ +Y + +S+ P+P+
Sbjct: 115 TTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 174
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
VS VVEPYN++L+ H +E
Sbjct: 175 VSTAVVEPYNSILTTHTTLE 194
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 149 bits (360), Expect = 3e-36
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 2/202 (0%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDL--QLERISVYYNEASVAT 280
MRE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG--- 57
Query: 281 AESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 460
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E+
Sbjct: 58 ---SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 461 VDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 640
+D LD +R+ +NC LQGF ++ +Y + +S+ P+
Sbjct: 115 IDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPA 174
Query: 641 PKVSDTVVEPYNAVLSIHQLVE 706
P+VS VVEPYN++L+ H +E
Sbjct: 175 PQVSTAVVEPYNSILTTHTTLE 196
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 149 bits (360), Expect = 3e-36
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 2/202 (0%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDL--QLERISVYYNEASVAT 280
MRE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG--- 57
Query: 281 AESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 460
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E+
Sbjct: 58 ---SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 461 VDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 640
+D LD +R+ +NC LQGF ++ +Y + +S+ P+
Sbjct: 115 IDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPA 174
Query: 641 PKVSDTVVEPYNAVLSIHQLVE 706
P+VS VVEPYN++L+ H +E
Sbjct: 175 PQVSTAVVEPYNSILTTHTTLE 196
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 149 bits (360), Expect = 3e-36
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 2/202 (0%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDL--QLERISVYYNEASVAT 280
MRE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG--- 57
Query: 281 AESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 460
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E+
Sbjct: 58 ---SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 461 VDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 640
+D LD +R+ +NC LQGF ++ +Y + +S+ P+
Sbjct: 115 IDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPA 174
Query: 641 PKVSDTVVEPYNAVLSIHQLVE 706
P+VS VVEPYN++L+ H +E
Sbjct: 175 PQVSTAVVEPYNSILTTHTTLE 196
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 147 bits (356), Expect = 8e-36
Identities = 74/201 (36%), Positives = 112/201 (55%), Gaps = 2/201 (0%)
Frame = +2
Query: 110 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG--VYRGTSDLQLERISVYYNEASVATA 283
RE++ + GQ G QIG WE+ EHGI P G V T D + E I+ ++ E +
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETA---- 63
Query: 284 ESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 463
GGK+VPR + +DLEP +D VR+G Y LF P+ + G+ A N +A+G YT G E++
Sbjct: 64 --GGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMI 121
Query: 464 DAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 643
D V+D V++ ENC+ LQGF ++ EY + +++ P+P
Sbjct: 122 DVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAP 181
Query: 644 KVSDTVVEPYNAVLSIHQLVE 706
+VS ++VEPYN++L H +E
Sbjct: 182 QVSTSMVEPYNSILMTHTTLE 202
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 146 bits (355), Expect = 1e-35
Identities = 71/201 (35%), Positives = 109/201 (54%), Gaps = 2/201 (0%)
Frame = +2
Query: 110 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDL--QLERISVYYNEASVATA 283
RE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG---- 56
Query: 284 ESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 463
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++
Sbjct: 57 --SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEII 114
Query: 464 DAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 643
D LD +R+ +NC LQGF ++ +Y + +S+ P+P
Sbjct: 115 DLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAP 174
Query: 644 KVSDTVVEPYNAVLSIHQLVE 706
+VS VVEPYN++L+ H +E
Sbjct: 175 QVSTAVVEPYNSILTTHTTLE 195
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 146 bits (354), Expect = 1e-35
Identities = 71/200 (35%), Positives = 111/200 (55%)
Frame = +2
Query: 107 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 286
MRE++ + GQ G QIG WE+ EHGI P G D + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGY---- 55
Query: 287 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 466
G++VPR+I +DLEP +D +R+GAY +LF P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 --GRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIID 113
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
LD +R+ NC+ LQGF ++ EY + +S+ P+P+
Sbjct: 114 TTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQ 173
Query: 647 VSDTVVEPYNAVLSIHQLVE 706
+S +VVEPYN++L+ H +E
Sbjct: 174 ISTSVVEPYNSILTTHTTLE 193
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 146 bits (353), Expect = 2e-35
Identities = 73/199 (36%), Positives = 111/199 (55%)
Frame = +2
Query: 110 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 289
RE++ + GQ G Q+G WE+ EHGI P G+ L ++ S +N T
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDS--FNTFFSETM-- 62
Query: 290 GGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDA 469
GK+VPRAI++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++D
Sbjct: 63 AGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDV 122
Query: 470 VLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKV 649
V+D VR+ ENC LQGF ++ +Y + + + P+P+V
Sbjct: 123 VMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQV 182
Query: 650 SDTVVEPYNAVLSIHQLVE 706
S ++VEPYN++L+ H +E
Sbjct: 183 STSMVEPYNSILTTHTTLE 201
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 125 bits (301), Expect = 4e-29
Identities = 64/176 (36%), Positives = 98/176 (55%), Gaps = 2/176 (1%)
Frame = +2
Query: 185 EHGIDPTG--VYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRS 358
EHGI P G V T D + E I+ ++ E + GGK+VPR + +DLEP +D VR+
Sbjct: 5 EHGIQPDGYHVEDDTYDEETETINTFFAETA------GGKHVPRCLFVDLEPTVVDEVRT 58
Query: 359 GAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQXXXX 538
G Y LF P+ + G+ A N +A+G YT G E++D V+D V++ ENC+ LQGF
Sbjct: 59 GTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHS 118
Query: 539 XXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVE 706
++ EY + +++ P+P+VS ++VEPYN++L H +E
Sbjct: 119 FGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLE 174
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 120 bits (289), Expect = 1e-27
Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
Frame = +2
Query: 116 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAESGG 295
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQ-------ADDD 59
Query: 296 KYVPRAILLDLEPGTMDA-VRSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVD 466
YVPRA+L+DLEP ++ ++S + LF DN GAGNNWA G Y +G E+ +
Sbjct: 60 HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQE 118
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
++D++ +E EN + L G ++RE +P +++ TYSV +
Sbjct: 119 KIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSD 178
Query: 647 VS-DTVVEPYNAVLSIHQLVE 706
S D VV PYN VLS+ +L+E
Sbjct: 179 TSTDVVVHPYNWVLSMQRLIE 199
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 120 bits (289), Expect = 1e-27
Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
Frame = +2
Query: 116 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAESGG 295
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQ-------ADDD 59
Query: 296 KYVPRAILLDLEPGTMDA-VRSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVD 466
YVPRA+L+DLEP ++ ++S + LF DN GAGNNWA G Y +G E+ +
Sbjct: 60 HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQE 118
Query: 467 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 646
++D++ +E EN + L G ++RE +P +++ TYSV +
Sbjct: 119 KIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSD 178
Query: 647 VS-DTVVEPYNAVLSIHQLVE 706
S D VV PYN VLS+ +L+E
Sbjct: 179 TSTDVVVHPYNWVLSMQRLIE 199
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 131 AGQCGNQIGAKFWEIISEEHGIDPTGVYR 217
+G C ++G K WE+ SE G PTG+ +
Sbjct: 233 SGDCLKKMGKK-WEVTSEAVGPRPTGILK 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,900,339
Number of Sequences: 27780
Number of extensions: 225738
Number of successful extensions: 730
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -