Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10p14
(646 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1) 37 0.016
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 36 0.021
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 36 0.028
SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3) 36 0.028
SB_42321| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_8391| Best HMM Match : Dynamin_N (HMM E-Value=9.7e-18) 36 0.037
SB_40598| Best HMM Match : Stap_Strp_toxin (HMM E-Value=2.7) 35 0.049
SB_27931| Best HMM Match : Filament (HMM E-Value=0.028) 35 0.065
SB_59343| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_28990| Best HMM Match : YABBY (HMM E-Value=0.45) 33 0.26
SB_6215| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_52107| Best HMM Match : DUF833 (HMM E-Value=1.6e-09) 32 0.35
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 32 0.35
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_8090| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 32 0.46
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 31 0.61
SB_14492| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13) 31 0.61
SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0) 31 0.80
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 31 0.80
SB_28851| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 31 1.1
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 30 1.4
SB_55700| Best HMM Match : tRNA_bind (HMM E-Value=0.79) 30 1.4
SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41) 30 1.4
SB_27966| Best HMM Match : RCSD (HMM E-Value=0.11) 30 1.4
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 30 1.4
SB_6548| Best HMM Match : Helicase_C (HMM E-Value=0.003) 30 1.4
SB_4894| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 30 1.9
SB_8269| Best HMM Match : Involucrin (HMM E-Value=0.15) 30 1.9
SB_36234| Best HMM Match : E-MAP-115 (HMM E-Value=0.25) 29 2.4
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_910| Best HMM Match : Cation_efflux (HMM E-Value=0.056) 29 2.4
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 29 3.2
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 29 3.2
SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 29 3.2
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 29 3.2
SB_160| Best HMM Match : PRP1_N (HMM E-Value=2.7) 29 3.2
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 29 4.3
SB_49764| Best HMM Match : HSA (HMM E-Value=2.2) 29 4.3
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_23676| Best HMM Match : DUF904 (HMM E-Value=0.44) 29 4.3
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 29 4.3
SB_31382| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12) 28 5.7
SB_17585| Best HMM Match : Ribosomal_L23 (HMM E-Value=3.3) 28 5.7
SB_56807| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_20579| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.39) 28 5.7
SB_3946| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_56434| Best HMM Match : DUF1225 (HMM E-Value=0.22) 28 7.5
SB_58243| Best HMM Match : DUF584 (HMM E-Value=1.5) 28 7.5
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 28 7.5
SB_41150| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_8955| Best HMM Match : TPR_1 (HMM E-Value=0.00014) 28 7.5
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 28 7.5
SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7) 27 9.9
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 27 9.9
SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) 27 9.9
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 27 9.9
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 27 9.9
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 27 9.9
>SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1)
Length = 210
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 408 QEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGN 587
+E K D +E E +N+ G + D E D+P + + KS +K S +P ++
Sbjct: 36 KEGKDDSEEEEDDNDDDDGDIEGDEEADEPPKKKKKAESKPKSAEKSKSSKSKTPAKKET 95
Query: 588 PVKRNNSPKRT 620
+ SPK++
Sbjct: 96 KKESKKSPKKS 106
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 36.3 bits (80), Expect = 0.021
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +3
Query: 306 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVK--ETEKENELVFGKMYSD 479
DE+P+ KK E+ T + + +DD + K + + K D K +T+ + E SD
Sbjct: 130 DEKPK--KKVEKKTPTKQESSSEEDDSSDDKDEKPKKKADNKGKKTQAKQESSSEDDSSD 187
Query: 480 SEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPK 614
ED+KP + + ++K++ +S+ D S K+ K
Sbjct: 188 EEDEKPKKKADNKGKKTQAKQESSSEEDDSSDEEEEKPKKKADDK 232
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/113 (21%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +3
Query: 318 EHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKP 497
E +K ++ ++K ++DD + + +++ KKD K+ E+ + ED+KP
Sbjct: 76 EEVKVKKDTKKATKGSS-SEDDSSSDEEEVKP-KKDAKKAATEDSSSDDDSSGEDEDEKP 133
Query: 498 --NVSEASPSGRAKSKKKHNS--DSDFSPPRRGNPVKRNNSPKRTTEYDSDLS 644
V + +P+ + S ++ +S D D P ++ + + K+ + + D S
Sbjct: 134 KKKVEKKTPTKQESSSEEDDSSDDKDEKPKKKADNKGKKTQAKQESSSEDDSS 186
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +3
Query: 306 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDV--KETEKENELVFGKMYSD 479
+E+P+ + T +K + ++DD N + + + K DV K+T + E G SD
Sbjct: 222 EEKPKKKADDKVKKTPAKQESSSEDDSSNEEEEKPKKKADVKGKKTPAKQESSSGDDSSD 281
Query: 480 SEDDKPNVSEASPSGRAKSKKKHNSDSDFS 569
++++ + +A S K+ K S SD S
Sbjct: 282 DDEEEKSKKKA-VSKEKKTPAKQESSSDDS 310
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Frame = +3
Query: 306 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDS- 482
DE+P+ + T +K + ++DD + +E +K K+ + + + K S S
Sbjct: 159 DEKPKKKADNKGKKTQAKQESSSEDDSSD-----EEDEKPKKKADNKGKKTQAKQESSSE 213
Query: 483 EDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTE 626
EDD + E P +A K K S + + PK+ +
Sbjct: 214 EDDSSDEEEEKPKKKADDKVKKTPAKQESSSEDDSSNEEEEKPKKKAD 261
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +3
Query: 408 QEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGN 587
++ KK+ KE +E E K ++ EDDK N E + K KKK + + ++
Sbjct: 1886 EDDKKEKKEENEEEEKKKKKKENEEEDDKKNNKEENEEDEKKEKKKKEENEEEDDKKKKT 1945
Query: 588 PVKRNNSPKRTTE 626
K+ + E
Sbjct: 1946 KKKKKKEEEEQEE 1958
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/86 (24%), Positives = 39/86 (45%)
Frame = +3
Query: 306 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSE 485
D++ + + +E+ K + +DD N+K + +E +K K+ ++ENE K +
Sbjct: 1888 DKKEKKEENEEEEKKKKKKENEEEDDKKNNKEENEEDEKKEKKKKEENEEEDDKKKKTKK 1947
Query: 486 DDKPNVSEASPSGRAKSKKKHNSDSD 563
K E R + K+ HN D
Sbjct: 1948 KKKKEEEEQEEDER-RRKEIHNGFRD 1972
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = +3
Query: 360 WKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSK 539
+K+ D + + ++K +KENE EDDK E + K K
Sbjct: 1854 YKVEENTDSLGMAVIEKSLQKTFHPKKKENE---------EEDDKKEKKEENEEEEKKKK 1904
Query: 540 KKHNSDSD 563
KK N + D
Sbjct: 1905 KKENEEED 1912
>SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1263
Score = 35.9 bits (79), Expect = 0.028
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +3
Query: 372 NQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHN 551
N DD NS Q Q+ +KD ++ ++++DDK N + + + +N
Sbjct: 139 NDDDNNNSNNQNQQQQKDDNNNNNKS--------NNNDDDKNNSKDDNNNNNGNKNSNNN 190
Query: 552 SDSDFSPPRRGNPVKRNNS 608
SDSD++ + N + +NS
Sbjct: 191 SDSDYNNNKDNNDDENSNS 209
>SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3)
Length = 471
Score = 35.9 bits (79), Expect = 0.028
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = +3
Query: 276 DDAPQVAGIIDERPEHIKKQEQFTTSSKW--KIVNQDDGFNSKLQIQEIKKDVKETEKEN 449
DD ++ E P+ +++ + Q+ G K + ++ KK+ K E +N
Sbjct: 219 DDDGDKEAVVSEEPKRSSSEQEVDIKQNFDENTTKQESGCKPKNKKRKKKKEKKTNETDN 278
Query: 450 E-LVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDS 560
E + K DSED+ E PS K K+K + DS
Sbjct: 279 ESSIKKKSCEDSEDE-----EHLPSKEKKKKRKKSKDS 311
>SB_42321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 35.9 bits (79), Expect = 0.028
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 294 AGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKEN--ELVFGK 467
AGI D + +K + +K + D L +QE+K +++E++ +N E K
Sbjct: 497 AGITDAQEGKVKGSNKLNVQTKQNKSKKTDAEAKLLSVQEVKINLRESKNQNRKESKKRK 556
Query: 468 MYSDSEDDKPNVSEA-SPSGRAKSKKKHNSDSDFSPPRRGNPVKRNN 605
+++ DD P A GR + S + ++GN R N
Sbjct: 557 HWNNHVDDYPRKGHACGVMGRPSTPTTTKRSSCATATQKGNSTGREN 603
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 35.5 bits (78), Expect = 0.037
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Frame = +3
Query: 378 DDGFNSKLQIQEIKKDVKETEKENE---LVFGKMYSDSEDDKPNVSEAS---PSGRAKSK 539
DDG+ K E++K+ + E+E+ +V K++ + P + S P+ K K
Sbjct: 151 DDGWEGK----EVRKEARRQEEEHRKVTVVHSKLHPEQSVTPPASTSPSAPPPAATKKKK 206
Query: 540 KKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSD 638
KK D + G+P +++ ++ T + D
Sbjct: 207 KKREGDGKVKVKKDGSPRRKDEEKRKVTTDEED 239
>SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 35.5 bits (78), Expect = 0.037
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +3
Query: 228 KLRPLEGDELDVYDEGDDAP-QVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFN-SKL 401
K+ PLEGD + + +E D ++ ++E + +++ ++ +K ++ + +K
Sbjct: 173 KVTPLEGDYVMLLNEWVDKDLDLSKEVNETKKEVQETKKDVQETKKEVHETKTKVDETKR 232
Query: 402 QIQEIKKDVKETEKE 446
++QE KKDV+ET+KE
Sbjct: 233 EVQETKKDVQETKKE 247
>SB_8391| Best HMM Match : Dynamin_N (HMM E-Value=9.7e-18)
Length = 957
Score = 35.5 bits (78), Expect = 0.037
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 405 IQEIKKDVKETEKENELVFGKM--YSDSEDDK-PNVSEASPSGRAKSKKKHNSDSDFSPP 575
++ I +D++ + F KM Y S K NV E+S + +++ K + +F+P
Sbjct: 389 LESICRDIRGIQAVERTYFNKMCEYVKSNHTKLHNVMESSVNSSSENILKEAEEMEFAPI 448
Query: 576 RRGNPVKRN 602
R GN VKRN
Sbjct: 449 RIGNAVKRN 457
>SB_40598| Best HMM Match : Stap_Strp_toxin (HMM E-Value=2.7)
Length = 192
Score = 35.1 bits (77), Expect = 0.049
Identities = 30/101 (29%), Positives = 46/101 (45%)
Frame = +3
Query: 324 IKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNV 503
+KK Q TS+ +K + + +++ + EI + + +E + S DD V
Sbjct: 79 VKKARQ--TSTTFKTYVELENYDNTPLVDEIGSTLSVSSSNSESSNRLSWPVSPDD---V 133
Query: 504 SEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTE 626
ASP +AKSKKK +D SP + N RN TE
Sbjct: 134 MTASPKRQAKSKKK----NDKSPSKNNNQTNRNQGNTGITE 170
>SB_27931| Best HMM Match : Filament (HMM E-Value=0.028)
Length = 428
Score = 34.7 bits (76), Expect = 0.065
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 330 KQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGK 467
K+E F S K+ + D KL+I+E+K ++++T KE ELV G+
Sbjct: 377 KEEIFKLQSDKKVA-EGDKEKLKLKIEELKLNLEQTNKEKELVMGE 421
>SB_59343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 393 SKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKK 542
+K ++QE KK+V+ET+K+ V GK+ S+ D ++ E S + SKK
Sbjct: 251 TKKEVQETKKEVQETKKDVHEVKGKV-SEMAVDLASLKEEFSSRKVNSKK 299
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 393 SKLQIQEIKKDVKETEK---ENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSD 563
+K ++QE KKDV+ET+K E + + + ++ K +V E + K+ + D
Sbjct: 209 TKKEVQETKKDVQETKKEVHETKTKVDETKKEVQETKKDVQETKKEVQETKKEVQETKKD 268
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +3
Query: 258 DVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFN-SKLQIQEIKKDVKE 434
DV + + + +DE + +++ ++ +K ++ + + ++QE KK+++E
Sbjct: 1306 DVQETKKEVDETKTKVDETKKEVQETKKDVQETKKEVQETKTKVDETNKEVQETKKEIQE 1365
Query: 435 TEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKK 542
T+K+ V GK+ S+ D ++ E S SKK
Sbjct: 1366 TKKDVHEVKGKV-SEMAVDLASLKEEFSSRNVNSKK 1400
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 228 KLRPLEGDELDVYDEGDDAP-QVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFN-SKL 401
K+ PLE D + + E D ++ ++E + +++ ++ +K ++ + +K
Sbjct: 1267 KVTPLERDYVTLLKEWVDKDLDLSKEVNETKKEVQETKKDVQETKKEVDETKTKVDETKK 1326
Query: 402 QIQEIKKDVKETEKE 446
++QE KKDV+ET+KE
Sbjct: 1327 EVQETKKDVQETKKE 1341
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 33.1 bits (72), Expect = 0.20
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Frame = +3
Query: 327 KKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVS 506
K ++ + S K K Q G K + EIKK+ E E+ +E + D EDD S
Sbjct: 792 KGKKDSSESEKGKAKKQRKGREKKGK--EIKKNDDEEEERDEEEDDEEDDDEEDDSKKAS 849
Query: 507 EASPSGRAKSK--KKHNSDSDFSPPRRGNPVKRNNSPKR 617
G+ K K D D G K+ + K+
Sbjct: 850 GKGKKGQDNKKKGKSKKDDEDEEAEEDGEKTKKGKTDKK 888
>SB_28990| Best HMM Match : YABBY (HMM E-Value=0.45)
Length = 853
Score = 32.7 bits (71), Expect = 0.26
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Frame = +3
Query: 222 LSKLRPLEGDELDVYDEGDDAPQVAGIIDERPEHIKK-QEQFTTSSKWKIVNQ--DDGFN 392
L+ LRP + LD Y + + + GIID+ P++++K E F ++ W +VN
Sbjct: 444 LNVLRPCDAVCLDTYSDARNV--LTGIIDQ-PDNLRKVSENFVKTTLWVLVNHCLSQSTQ 500
Query: 393 SKLQIQEIK-KDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFS 569
+ + E + + +V D+ D+ ++ SP + ++ S
Sbjct: 501 DSVSVHETRPSSTTRLLTPSTIVTNTNTRDTHTDELEMTRVSPVPSKNMAEDIAVENPSS 560
Query: 570 PPRRGN 587
P R N
Sbjct: 561 KPLRSN 566
>SB_6215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 381 DGFNSKLQIQEIKKDVK--ETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNS 554
D N++ +I E K E +KE+ G + D++ ++S ++ S KSK K
Sbjct: 479 DDCNAEDKISENHKQQTNDENDKESRARRGTEGKSASDNEKDLSRSAKSKNTKSKSKKKE 538
Query: 555 DSDFSPPRR-GNPVKRNNSPKRTTE 626
D P +PV ++++ K +TE
Sbjct: 539 DDAVKPSSSPKSPVNKSSANKGSTE 563
>SB_52107| Best HMM Match : DUF833 (HMM E-Value=1.6e-09)
Length = 624
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/77 (25%), Positives = 40/77 (51%)
Frame = +3
Query: 390 NSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFS 569
NS+ Q Q + + + E +K N++ G+ ++K + S +K S++D++
Sbjct: 361 NSREQNQLLARLIAEYDK-NKIELGEQNKKLSEEKQRLESRISS---IEEKLRFSETDYT 416
Query: 570 PPRRGNPVKRNNSPKRT 620
PPRR ++RN +R+
Sbjct: 417 PPRRKQSLQRNEENERS 433
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +3
Query: 390 NSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDF 566
N K++++ + +D + KE + + + +D E+D ++ E KSK K + +D+
Sbjct: 260 NEKIRLEHVLRDRERQLKEKDRIIEENKADYEEDLKSLKELLRKAEEKSKSKMKAINDY 318
>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Frame = +3
Query: 306 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDV----KETEKENELVFGKMY 473
D + E K++++ K + ++ D + K +++ + D+ K+ +K + K
Sbjct: 730 DRKMEKKKRKKEKKRKRKHEQLSYSDSEDEKREVKSVSDDMLSSNKDNKKRKKKKKEKEK 789
Query: 474 SDSEDDK-------PNVSEASPSGRAKSKKKHNSDSDFSPPR 578
S DDK P S++S S K K +HN D PR
Sbjct: 790 SKQSDDKMRLLSDSPGDSDSSSSRDRKRKHRHNDDVTDKKPR 831
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 471 YSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTE 626
+S+S S+ P R + + + S SPPRR P + + SP+RT E
Sbjct: 1030 HSESPQRVTKSSKERPRKRPRHQSRERRPSS-SPPRRSRPQRTSPSPRRTPE 1080
>SB_8090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 32.3 bits (70), Expect = 0.35
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +3
Query: 369 VNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKH 548
V QD+ N K Q Q K D K N +++DDK N + + + K+
Sbjct: 23 VTQDNSNNQKQQQQ--KDDNNNNNKRN---------NNDDDKNNSKDDNNNNNGNKNSKN 71
Query: 549 NSDSDFSPPRRGNPVKRNNS 608
NSDSD++ + N N++
Sbjct: 72 NSDSDYNNNKDNNNDDENSN 91
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Frame = +3
Query: 381 DGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKK-----K 545
DG Q + + TEK + + YS+S D + S + R K KK K
Sbjct: 672 DGIGEMSSRQSSQSRGRSTEKNKK----RRYSESSSDSFSSSSSEDRRRTKKKKLSKHRK 727
Query: 546 HNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLS 644
+N D + P ++ K ++ + DSD S
Sbjct: 728 NNKDLELQPIKKVKKRKETKKSRKYSTTDSDCS 760
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 31.5 bits (68), Expect = 0.61
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +3
Query: 408 QEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHN----SDSDFSPP 575
+ + K ++E K V + S E P S GR S+++ + SD+ SPP
Sbjct: 19 RNVHKSMEEDSKRRSSVDRRPRSSRES--PERKRPSSLGRDSSERRPSARVSSDNSRSPP 76
Query: 576 RRGNPVKRNNSPKRTTEYD 632
R + +R++SP R + D
Sbjct: 77 HRRDSSRRSHSPSRRSSDD 95
>SB_14492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 31.5 bits (68), Expect = 0.61
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +3
Query: 414 IKKDVKETEKENELVFGK-MYSDSE--DDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRG 584
+K+ + EKE VF K Y S+ D KP SE RAKS + + +
Sbjct: 69 VKEHLSGPEKERLAVFLKERYKPSQETDSKPEKSETRRESRAKSSHSKEKEKEIRKEEKS 128
Query: 585 NPVKRNNSPKRT 620
+ N +P T
Sbjct: 129 EATELNYTPSFT 140
>SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13)
Length = 752
Score = 31.5 bits (68), Expect = 0.61
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 375 QDDGFNSKLQIQEIKKDVKETEKEN-ELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHN 551
Q++ +K++ +E K D +ET + + FGK +DDK + ++ K +
Sbjct: 374 QENKEKNKVEEEEKKSDNEETTPDPPKSRFGKFKWARKDDKKDEGDSGEHENESEKAEDK 433
Query: 552 SDSDFSPPRRGNPVKRNNSPKRTTEY 629
++ P + G P + S R +++
Sbjct: 434 NEKPAEPTKEGVPAEAKLSKPRLSKF 459
>SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 31.5 bits (68), Expect = 0.61
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +3
Query: 408 QEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHN----SDSDFSPP 575
+ + K ++E K V + S E P S GR S+++ + SD+ SPP
Sbjct: 19 RNVHKSMEEDSKRRSSVDRRPRSSRES--PERKRPSSLGRDSSERRPSVRVSSDNSRSPP 76
Query: 576 RRGNPVKRNNSPKRTTEYD 632
R + +R++SP R + D
Sbjct: 77 HRRDSSRRSHSPSRRSSDD 95
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +3
Query: 405 IQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRG 584
+ EIKK+ +E E++ K + D++ E +PS KSKK + + G
Sbjct: 473 VAEIKKEAEEEEEKEPKSEKKKRKRTSDNESEKEETTPSKLKKSKKDKKKAKEATEEDDG 532
Query: 585 NPVKRNNSPKR 617
K K+
Sbjct: 533 EEKKEKKKKKK 543
>SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0)
Length = 1035
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/93 (21%), Positives = 38/93 (40%)
Frame = +3
Query: 339 QFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASP 518
QF+ SK K + + + L + K+ N + K+ ++ D++ V
Sbjct: 802 QFSLPSKTKKPSDTEAYGPALPQSSVPVSSKQCV--NTITISKVSAERSDEEEYVERTVK 859
Query: 519 SGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKR 617
K+K ++ D+D S G VKR ++
Sbjct: 860 KKSHKNKTRNKIDTDSSDVETGRHVKRKEKKRK 892
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 31.1 bits (67), Expect = 0.80
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 318 EHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKP 497
+ +KK+EQ T WK V + ++ +E KK+ +E EK+ G++ + P
Sbjct: 1895 KELKKEEQNTEKYSWKQVT-PLAASDTMKGKEPKKERQEAEKD----IGELVEHQQTSLP 1949
Query: 498 NVSEASP-SGRAKSKKKHNSDSDFS 569
NV++ P + K+ K + FS
Sbjct: 1950 NVTKNRPEASPPKTDPKKPEEGRFS 1974
>SB_28851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 31.1 bits (67), Expect = 0.80
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 375 QDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNS 554
+ DG + +E+K D K +K N+ K ++SE K + + ++ KK N+
Sbjct: 124 ESDGLETSESKKELKSDTKSVKKANK---RKTMNESESTKTKKPKKAKDSEKRTPKKKNT 180
Query: 555 DSDFSPPRRGNPVKRNN 605
P+R +P +R +
Sbjct: 181 T---KLPKRKSPKRRTD 194
Score = 30.3 bits (65), Expect = 1.4
Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 13/137 (9%)
Frame = +3
Query: 255 LDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQD-----DGFNSK------L 401
L+ YD DD P G+ D Q+ + ++D +GF
Sbjct: 59 LEKYDSSDDLPGEPGVKDPSKTDTIVQDIWVPPDVESDHDEDYVPDLEGFEGSEDEKGVA 118
Query: 402 QIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRR 581
E++ D ET + + + S + +K S S + K KK DS+ P++
Sbjct: 119 DDMEMESDGLETSESKKELKSDTKSVKKANKRKTMNESESTKTKKPKK-AKDSEKRTPKK 177
Query: 582 GNPVK--RNNSPKRTTE 626
N K + SPKR T+
Sbjct: 178 KNTTKLPKRKSPKRRTD 194
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +3
Query: 306 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSE 485
++R + K +E+ SS+ ++DD K + +++KKD K+ K++ + SDSE
Sbjct: 170 EKRLKKEKNKEKQRDSSESSSDSEDD---RKRRKKKVKKDKKQKAKDSS----ESLSDSE 222
Query: 486 DDKP-NVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKR 617
DD+ + + K+K S D R K+ N ++
Sbjct: 223 DDRERRKKKVKKEIKHKAKDSSESSIDSEDDRERKERKKKNKKEK 267
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +3
Query: 330 KQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSE 509
K+++ SS+ ++DD K +++KK++K K++ + DSEDD+
Sbjct: 207 KKQKAKDSSESLSDSEDDRERRK---KKVKKEIKHKAKDSS----ESSIDSEDDRERKER 259
Query: 510 ASPSGRAKS-KKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLS 644
+ + K K K S S+ + ++ K+ + D D S
Sbjct: 260 KKKNKKEKKHKSKETSSSESNKSSDSEEKAKSKKNKKDKKNDKDSS 305
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 435 TEKENELVFGKMYSDSEDDK-PNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSP 611
++K+ +L K+ + K P SE+ SG K+ DSD P R+ PV++ P
Sbjct: 975 SDKKKDLAAEKVSKNVVTRKRPASSESESSGVVKA----GEDSDGRPARK-RPVRKGRPP 1029
Query: 612 KRTTEYDSD 638
KR E + D
Sbjct: 1030 KRLAEEEDD 1038
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 402 QIQEIKKDVKETEKENELVFGKMYSDSED 488
Q+Q +K+DVK TE+E +L K+ + ED
Sbjct: 182 QLQSMKEDVKNTEEELKLDLEKVIQEKED 210
>SB_55700| Best HMM Match : tRNA_bind (HMM E-Value=0.79)
Length = 632
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 390 NSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFS 569
N ++ I+ + +TE + V G+ D+E D V +P A + N DS+F
Sbjct: 353 NDRIPIKAAQDSTLDTELK---VNGEEKEDAEFDSLPVKPRTPKSGATASNVENGDSEFD 409
Query: 570 ----PPRRGNPVKRNNSPKRTTEYDS 635
PR + ++ K E+D+
Sbjct: 410 ALSVKPRSPKTITTSSEEKEDAEFDA 435
>SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41)
Length = 1682
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/104 (23%), Positives = 44/104 (42%)
Frame = +3
Query: 306 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSE 485
+ R K+ + + K +DD + K ++QE DV + ++ NE+V + DSE
Sbjct: 398 ESRSSDTKEVSRHGKTDKKNNDKKDDESSRKDKVQEEDDDVDD-DQPNEMVKQESGLDSE 456
Query: 486 DDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKR 617
D+ V E + K+ + DS + + K K+
Sbjct: 457 DESEEVEERRTTRSGKTNRS-GKDSQSKLTTQSSAKKNTEEQKQ 499
>SB_27966| Best HMM Match : RCSD (HMM E-Value=0.11)
Length = 652
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 243 EGDELDVYDEGDDAPQVAGIIDER-PEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIK 419
+G+E + +EG++ Q +ER P + ++E + IV Q+ N K + ++
Sbjct: 351 DGEEREEDEEGEEGGQDEADQNERQPAQVSQEEPMVVQEEPMIV-QESASNLKDEPMVVE 409
Query: 420 KDVKETEKENELVFGKMYSDSEDDKP 497
KD+ + E+E E G+ + ++ + P
Sbjct: 410 KDL-QAEQEEEGHLGEEANKAKQEPP 434
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/88 (20%), Positives = 41/88 (46%)
Frame = +3
Query: 300 IIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSD 479
I DE + +++ E+ T + K + + N+ ++ +++++K+ +ENE + +
Sbjct: 679 IEDEHKQRLEELEKKTKKEEEK--KRSEHVNNDEELDRLQEEIKQMGEENEKRYEEEKQK 736
Query: 480 SEDDKPNVSEASPSGRAKSKKKHNSDSD 563
EDDK E + + N D +
Sbjct: 737 IEDDKKRWEEERKLREDEINQMFNDDQE 764
>SB_6548| Best HMM Match : Helicase_C (HMM E-Value=0.003)
Length = 1063
Score = 30.3 bits (65), Expect = 1.4
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Frame = +3
Query: 240 LEGDELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQI---Q 410
+EGD+ D D+GDD + I+ + I DD S I
Sbjct: 821 IEGDDDDDIDDGDDIEGYDDDDINDGDDIEGDDDVDIDDGDDIEGDDDEHISGEDIGGDD 880
Query: 411 EIKKDVKETEKENELVFGKMYSDSED--DKPNVSEASPSGRAKSKKKHNSDSDFSPPRRG 584
+ DV + E E+E+V G +D+++ D +V A+ R + ++ +SDSD + P
Sbjct: 881 DDDDDVIDGEDEDEIVTGDDTADNDETGDDDDVDTATLPVR-RVRRLDSSDSDATNPSEE 939
Query: 585 NPVKRNNSP 611
+ N SP
Sbjct: 940 RD-RHNISP 947
>SB_4894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/90 (22%), Positives = 38/90 (42%)
Frame = +3
Query: 306 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSE 485
DE KK ++ ++K + D S +++EI+ K+ ++E ++
Sbjct: 6 DEDRREKKKDKEKEKGQRYKAFHSDASDESDEELEEIRPKGKKVKREKSRTLALPRIKAK 65
Query: 486 DDKPNVSEASPSGRAKSKKKHNSDSDFSPP 575
K + + K KKK S++ SPP
Sbjct: 66 --KHQKKKEKEKEKEKDKKKKKSETPSSPP 93
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 29.9 bits (64), Expect = 1.9
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 7/135 (5%)
Frame = +3
Query: 240 LEGDELDVYDEGDDAPQVAG----IIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQI 407
L+ D+ + DE D P +A E+P K + S K K ++ D S+
Sbjct: 47 LDRDQQVMEDEVKDEPMLANEYLASFKEKPSPSPKTANKSESEKGKGESEKDKGESEKDK 106
Query: 408 QEIKKDVKETEK---ENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPR 578
E +KD E+EK E+E G+ + + E+ K+K S+ +
Sbjct: 107 GESEKDKGESEKDKGESEKDKGESEKEKCQSEKEKCESEKEKCESEKEKCESEKKVEESK 166
Query: 579 RGNPVKRNNSPKRTT 623
NP ++ K T
Sbjct: 167 DENPEEKIEEKKDDT 181
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 318 EHIKKQEQFTTSSKWKIVNQDDGFNS-KLQIQEIKKDVKETEKENELVFGK 467
EH KK S +V+ + FN+ ++ I+ VKE +KEN+ V GK
Sbjct: 652 EHYKKNPMVEKSGT--VVHLRNPFNATRINAASIEDRVKELQKENKNVTGK 700
>SB_8269| Best HMM Match : Involucrin (HMM E-Value=0.15)
Length = 334
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +3
Query: 300 IIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKM-YS 476
I +E PE K+Q+Q Q+ +++QE ++ V + ++N +
Sbjct: 89 ISEEEPEDKKRQQQMRK-------RQEPPHQQDVEVQEAQQKVDDLTRQNRQQDVNIDEQ 141
Query: 477 DSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGN 587
D+ +D P +E +P+ R +++ + P +RGN
Sbjct: 142 DNNEDAPVGAENAPTKRTPPTRQYLAARLAYPQQRGN 178
>SB_36234| Best HMM Match : E-MAP-115 (HMM E-Value=0.25)
Length = 257
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 480 SEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRG 584
+ED+ + P AK +K SDSD SPPR+G
Sbjct: 18 TEDEPKKKRKKKPKAVAKLPRK-GSDSDQSPPRKG 51
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +3
Query: 369 VNQDDGFNSKL-----QIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAK 533
VN+ + N KL Q++++K ++ EKEN K+ E+D+ ++ S K
Sbjct: 217 VNERNDLNFKLSQSERQLEKMKASLRWIEKEN----AKLQKRHEEDQQSIWNLSVQDEFK 272
Query: 534 SKKKHNSDSD 563
K+K +SD
Sbjct: 273 KKEKQEVESD 282
>SB_910| Best HMM Match : Cation_efflux (HMM E-Value=0.056)
Length = 416
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/100 (21%), Positives = 38/100 (38%)
Frame = +3
Query: 339 QFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASP 518
+F + ++ D ++KL+ E+++ +E E+E E K D D+ + +
Sbjct: 273 EFENFQQIVVMASGDENDNKLKEDELQRSKREREREKERDRNKEDRDRVKDRDRDRDKAR 332
Query: 519 SGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSD 638
+ + KH S D R KR D D
Sbjct: 333 DRDRERRDKHKSSRDRDKDRSSRDRKREKRDGDRQRDDKD 372
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +3
Query: 402 QIQEIKKDVKETEKENELV---FGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSD 563
+I E+++ VKE EKE L+ M + S+DD + + + R K+ +D++
Sbjct: 423 RITELERRVKELEKEKNLLEQQVKTMKNKSDDDDKKIKDLNEKVRVLEKQLKENDAE 479
>SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 462 GKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGN 587
G+ SD DDK N +AS + + + KH+ D +GN
Sbjct: 596 GRPSSDDYDDKQNDDDASFAEQISAISKHDVKDDIPKENKGN 637
>SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0)
Length = 1182
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 345 TTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSG 524
T+ + + DD S L+ Q++ K + K+ +DS++ +P +A+P
Sbjct: 1088 TSKEAQSLSDSDDELGSLLEKQKVSPKKKSSPKKKGKAPSSKSADSDEAQPGKKKAAPRK 1147
Query: 525 R-AKSKKKHNSDSD 563
R AK + D D
Sbjct: 1148 RPAKGVTAASRDGD 1161
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 474 SDSEDDKPNVSEASPSGRAKSKKKHNSDSD 563
SDSEDD + + P+GR S NS+ D
Sbjct: 787 SDSEDDASSSYKEKPAGRRSSGASQNSEPD 816
>SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 1775
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +3
Query: 423 DVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKH-NSDSDFSPPRRG---NP 590
D+K+ E E GK+ S+ E K N +A P K KKK+ N + G
Sbjct: 671 DIKDHAVEKE-TRGKVDSEKEVGKSNHDDAKPKVIPKEKKKNGNGTTTMKEASEGVSNKH 729
Query: 591 VKRNNSPKR---TTEYDSDLS 644
V + P + T+++D DLS
Sbjct: 730 VPHSREPTKNIDTSKHDPDLS 750
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 432 ETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSP 611
E E ++++V G S+ P+ ++P K KKK +FS + V N+SP
Sbjct: 101 EEESDDDVVIGCGKKTSKRSTPSPDPSTPEKTKKRKKKKKVKKEFSL----DAVDGNSSP 156
Query: 612 KRTT 623
R T
Sbjct: 157 VRNT 160
>SB_160| Best HMM Match : PRP1_N (HMM E-Value=2.7)
Length = 257
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/81 (24%), Positives = 42/81 (51%)
Frame = +3
Query: 300 IIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSD 479
I+ R HI K E+ SSK + ++D + ++ ++D+++T + + + K ++
Sbjct: 2 ILKFRESHIAKLERMRKSSKEDLEKEEDTRDQQI----TREDLEQTRESLQQLKEKHVNE 57
Query: 480 SEDDKPNVSEASPSGRAKSKK 542
SE + + E +G + SKK
Sbjct: 58 SEGHRRKIVELE-AGLSSSKK 77
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +3
Query: 390 NSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFS 569
N +++ Q+ ++ V+E + E+E +S+ PN S +S +S K+ + S
Sbjct: 789 NGRIEEQQPQEGVEENKSESE---NNQKDNSQSSSPNGSTSSSKDECESTKE-KPEKHTS 844
Query: 570 PPRRGNPVKRNNS 608
PR + + NS
Sbjct: 845 RPRHDSKSDKKNS 857
>SB_49764| Best HMM Match : HSA (HMM E-Value=2.2)
Length = 342
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +3
Query: 483 EDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRN 602
+D+ P ++ + + K K+K N S+FS + +PV+ +
Sbjct: 129 DDNAPKQTDGAKEEKPKKKQKINGKSEFSESKTDSPVQES 168
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 28.7 bits (61), Expect = 4.3
Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 1/132 (0%)
Frame = +3
Query: 234 RPLEGDELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQE 413
+P E D +E D P + E +K+ K + +DG + +
Sbjct: 163 KPEENDMGGTEEENPDVPSDEPLTGGTEEDDEKEASEEEEGKPSL---EDGTEDTPEANK 219
Query: 414 IKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPV 593
++ KE EK E K + +D P EA +S K+ ++ + P+ P
Sbjct: 220 TPEEPKEDEKVTEEETPKEETPKVEDAPEEVEAPK--EEESPKEEDTPKEEDAPKEDTPK 277
Query: 594 KR-NNSPKRTTE 626
+ PK T+
Sbjct: 278 EEAKEEPKEDTK 289
>SB_23676| Best HMM Match : DUF904 (HMM E-Value=0.44)
Length = 591
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 285 PQVAGIIDERPEHIKKQEQFTTSSKWKIV----NQDDGFNSKLQIQEIKKDVKETEKENE 452
P II E + K+E+ + K NQ +G ++ QI E + ++++ E+ENE
Sbjct: 262 PSAEEIIRSNEEEVAKREEKLRKLETKRTEVPENQREGIDT--QIAETQSEIEQLERENE 319
Query: 453 LVFGKM 470
++ +M
Sbjct: 320 VIEERM 325
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 234 RPLEGDELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGF---NSKLQ 404
R LEG + +E DDA A DER + K +F + + QD +++
Sbjct: 1764 RKLEGQVNTMQEELDDAENEAKAADERSK--KAAAEFARAQAELVSAQDHATAADRARMS 1821
Query: 405 IQEIKKDVKETEKENELVFGK 467
+ I+KD++ +E E GK
Sbjct: 1822 AERIQKDLEMKLEELEAAGGK 1842
>SB_31382| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12)
Length = 1799
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 429 KETEKENELVFGKMYSDSEDDKPNVSEASPSG 524
+ET +E L+F + S +E + SEA PSG
Sbjct: 183 EETVQEKALLFEQNMSSAESTRAQTSEARPSG 214
>SB_17585| Best HMM Match : Ribosomal_L23 (HMM E-Value=3.3)
Length = 193
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +3
Query: 222 LSKLRPLEGDELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKL 401
+SKL PL G L +E D+ ++ E +K +FT + W ++N + S
Sbjct: 1 MSKLNPLGG--LKRSNENDERLSATS---KKAEDVK---EFTGAKTWVMLNYEKSKKSFA 52
Query: 402 QIQEIKKDVKETEKEN 449
Q+ +I E KEN
Sbjct: 53 QLNDIIDHYTEENKEN 68
>SB_56807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +3
Query: 471 YSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSD 638
+ DS DD+ NV +A+ + +K N++++ N K NN+ + D +
Sbjct: 4 HGDSHDDEENVCDAN-NDNDNNKDNDNNNNNNDKDNNNNKDKNNNNNDKNNNNDKN 58
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 28.3 bits (60), Expect = 5.7
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 12/133 (9%)
Frame = +3
Query: 270 EGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQE--------IKKD 425
E D + + + +P+ +K+ Q T++K +D+ K++ Q+ +K D
Sbjct: 114 ESDSSESLTPVRKRQPQK-RKKVQSKTNNKSDNEEEDERQEKKIRKQKQEKRKRKTVKAD 172
Query: 426 VKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKK----HNSDSDFSPPRRGNPV 593
+E+E K S + K N A+ AKSKKK ++SD +
Sbjct: 173 FNSSEEEVSSQKTKASSRKDQKKMNKQMANKGKGAKSKKKTIESNSSDDEEGQVAELRKG 232
Query: 594 KRNNSPKRTTEYD 632
PK++ E D
Sbjct: 233 ASEQFPKKSEESD 245
>SB_20579| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.39)
Length = 721
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 492 KPNVSEASPSGR-AKSKKKHNS-DSDFSPPRRGNPVKRNNSPKRTT 623
+P +S++ P+ R ++S K + ++ PP +PV R+ +P R T
Sbjct: 545 EPTISQSEPTIRQSESAAKDTAPEAPAQPPTAADPVSRSTTPTRPT 590
>SB_3946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 429 KETEKENELVFGKMYSDSEDDKPNVSEASPSG 524
+ET +E L+F + S +E + SEA PSG
Sbjct: 221 EETVQEKALLFEQNMSSAESTRAQTSEARPSG 252
>SB_56434| Best HMM Match : DUF1225 (HMM E-Value=0.22)
Length = 387
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 366 IVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKK 545
I+N +D F S + +QE +T++ E K+ SD+ED + ++E + K K
Sbjct: 288 ILNNNDDFQS-ISVQEAWVKEGKTKESKENFNFKLTSDTEDFEYEITENPDKEENQRKDK 346
Query: 546 HNS 554
N+
Sbjct: 347 LNN 349
>SB_58243| Best HMM Match : DUF584 (HMM E-Value=1.5)
Length = 1308
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Frame = +3
Query: 222 LSKLRPLEGDELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKL 401
L L EGD + D D+P + +D E +KK+++ + K + D S
Sbjct: 710 LELLEEQEGDLISFDDGNGDSPCESKGVDGSGEPVKKRKKKISRPKIPTIFYADETKSTE 769
Query: 402 QIQEIKKDVKETEKENELVFGK-----MYSDSEDDK 494
+ +E D+ + + +V K M DS D+K
Sbjct: 770 EEEEGNDDIDDDDVSEGMVVQKAREETMGQDSMDEK 805
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 27.9 bits (59), Expect = 7.5
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +3
Query: 246 GDELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKK- 422
GD+ D D+GDD G++ E ++ ++ ++ S+ N+D+ E K+
Sbjct: 114 GDDCDSEDDGDDDDD--GLLGEEEKNERESDEDVESNN----NEDEDIQEVEDDNEGKEN 167
Query: 423 DVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDS 560
D E+++EN+ + +DD NV + ++ + N +
Sbjct: 168 DGGESDEENDDDDEDGDDEGDDDDRNVIDLKHMVKSNKESLSNGST 213
>SB_41150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 483 EDDKPNVSEASPSGRAKSKKKHNSDSDFSPP 575
E++K +++A +G KKK D + SPP
Sbjct: 317 EEEKEEMNDALGAGEETPKKKEEEDDEKSPP 347
>SB_8955| Best HMM Match : TPR_1 (HMM E-Value=0.00014)
Length = 411
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +3
Query: 375 QDDGFN--SKLQIQEIKKDVKETEKENE 452
+DDG KLQ++ IKKD+ +T EN+
Sbjct: 124 RDDGLGIFRKLQVENIKKDICKTFAENQ 151
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 474 SDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLS 644
S+S+D KP+ S + S S NS+SD S NP + T SD S
Sbjct: 138 SNSDDSKPDNSNTNNSNSDNSNTD-NSNSDNSTSDNSNPDNLTSDNSNTDNSGSDNS 193
>SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7)
Length = 1376
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 402 QIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEAS 515
+++E+K + EKE E + GK Y DKP V E+S
Sbjct: 1215 EVEELKLKIARIEKEKEYLEGK-YDQLNSDKP-VLESS 1250
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +3
Query: 354 SKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSD-SEDDKPNVSEASPSGRA 530
S+++ NQ QE+ +KE E E E KM D + + V+E A
Sbjct: 1727 SQFETTNQTYENELSAAKQELDNKIKELESEKETALEKMSEDMQKQSRSRVAEMKKKAEA 1786
Query: 531 KSKKKHN 551
K N
Sbjct: 1787 KISSVKN 1793
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 27.5 bits (58), Expect = 9.9
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Frame = +3
Query: 312 RPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIK-KDVKETEKENELVFGKMYSDSED 488
+ E +KK ++ SS+ ++++ KL+ +K K +K+ + + SDSE+
Sbjct: 6 KKEVVKKSKKKEESSESDSESEEEA-PVKLKADVLKLKGIKKPDSSSS-----SESDSEE 59
Query: 489 DKPNVSEASPSGRAK-----------SKKKHNSDSDFSPPRRGNPVKR---NNSPKRTTE 626
+ P A +G+AK +K S+SD P+ PV + NS K+ E
Sbjct: 60 EAPKKPAAKQNGKAKKQNGKAPVKKAAKSSSESESDEDAPKIKAPVAKTSGKNSAKKAAE 119
Query: 627 YDSD 638
S+
Sbjct: 120 SSSE 123
>SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 1841
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = +3
Query: 375 QDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNS 554
+++ N + D + ENE ++ + P + + GR ++ + +N+
Sbjct: 1549 RNNNSNKTMDYDNNSNDGVDDNNENESR-NNNDANKQQQTPAATAQTRQGRVQNNRNNNN 1607
Query: 555 DSDFSPPRRGNPVKRNNSPKRTTEYDSD 638
D D + +RNN+ +T +YD++
Sbjct: 1608 DED------DDDDERNNNSNKTMDYDNN 1629
>SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 704
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/67 (22%), Positives = 30/67 (44%)
Frame = +3
Query: 426 VKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNN 605
V + K + VFG+++S + ++P + + + + K K PP+ P +
Sbjct: 274 VIDPPKNAKPVFGELHSKPKPERPKIPDHNRNTEQKESPKPLRFQIIDPPKDTKPSSGIS 333
Query: 606 SPKRTTE 626
+ KR E
Sbjct: 334 TSKRIPE 340
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 474 SDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPP 575
SDS+ + + SE +P G S + D D PP
Sbjct: 450 SDSDSESDSESEPAPPGEEMSPAEVRIDEDLRPP 483
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 465 KMYSDSEDDKPNVSEAS--PSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSD 638
K + + KP +A+ PS + K+ K + D PR+ + K+ + K + D D
Sbjct: 141 KQAASRKTSKPQDKQAARQPSRKTKTSKPQDQDKQAERPRQASRKKKTSKNKPSKMQDQD 200
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 27.5 bits (58), Expect = 9.9
Identities = 8/32 (25%), Positives = 24/32 (75%)
Frame = +3
Query: 390 NSKLQIQEIKKDVKETEKENELVFGKMYSDSE 485
N +++++E+K ++++ E+EN+ + G++ + E
Sbjct: 598 NQEIELEELKDNIEDLERENKKLKGEIECNDE 629
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 27.5 bits (58), Expect = 9.9
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 13/135 (9%)
Frame = +3
Query: 225 SKLRPLEGDELDVY-DEGDDAPQVAG----IIDERPEHIKKQEQFTTSSKWKIVNQDDGF 389
+KL P +++ V D G +P+V + E EH K++ +T + ++ + D
Sbjct: 66 TKLVPERDNDVCVLRDNGRKSPEVPARPRQSLAELLEHPTKKDPSSTENH-SLLEEKDIP 124
Query: 390 NSKLQIQEIKKDVKETEKE-------NELVFGKMYSDSEDDKPNVSEASPSGRAKSK-KK 545
K +E+K++ KE EKE ++ K + E +K + R K K KK
Sbjct: 125 RDKKSDKELKEEKKEKEKERMKKEEKHKEKTRKEEKEREKEKEKTKKEEKESREKEKTKK 184
Query: 546 HNSDSDFSPPRRGNP 590
+S ++ +P
Sbjct: 185 EEKESKEKDKQKKDP 199
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 408 QEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSD 563
QEIK D + E+++ L F + Y D+ DD P ++S R + ++ +SD
Sbjct: 355 QEIK-DEQARERKHLLEFLEDYDDNRDD-PKYYKSSSMNRRRRDREAEMESD 404
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +3
Query: 405 IQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRG 584
++E K+++E + ENE + GKM D E ++++ S + K + ++
Sbjct: 523 LEEKAKELEEAKSENEAISGKM-KDMESQLTSIADELASTKEALKLSQHKVTELESSLSV 581
Query: 585 NPVKRNNSPKRTTE 626
+ ++N+ T +
Sbjct: 582 AQLTQSNNDSNTLQ 595
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,979,886
Number of Sequences: 59808
Number of extensions: 241382
Number of successful extensions: 1267
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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