Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10p05
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC103567-2|AAL35733.1|  220|Caenorhabditis elegans Hypothetical ...    29   2.5  
AF025452-4|AAB70945.1|  642|Caenorhabditis elegans Hypothetical ...    28   5.9  

>AC103567-2|AAL35733.1|  220|Caenorhabditis elegans Hypothetical
           protein Y51F10.6 protein.
          Length = 220

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 24/85 (28%), Positives = 42/85 (49%)
 Frame = +3

Query: 255 IFKVPLKGRTLLASAIFCISDTSLLIRIMSMPLQVTFTQSTKLSIPDMSWPFATALSHVR 434
           I+K+P KG +L+   +         ++    PL+ TF    +L++PD+ +   T +    
Sbjct: 80  IWKLPTKG-SLVKHRLHL----DYTVKQQDPPLKYTFDDIVELTVPDVQFEICTQV---- 130

Query: 435 FTQPPTLSGALLPCPASLKCHTIVS 509
            +Q P   GA L C A+  CH ++S
Sbjct: 131 LSQQP---GAQL-CRATSPCHFVIS 151


>AF025452-4|AAB70945.1|  642|Caenorhabditis elegans Hypothetical
           protein B0454.8 protein.
          Length = 642

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 348 PLQVTFTQSTKLSIPDMSWPFATALSHVRFTQP 446
           PL  T T + + +  DM W + T ++   FT+P
Sbjct: 125 PLPQTVTINAQCNTADMKWNYVTVINGETFTEP 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,415,601
Number of Sequences: 27780
Number of extensions: 382900
Number of successful extensions: 968
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)