Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10o08
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8CN46 Cluster: Para-nitrobenzyl esterase chain A; n=15...    33   5.3  
UniRef50_A0C626 Cluster: Chromosome undetermined scaffold_151, w...    33   5.3  

>UniRef50_Q8CN46 Cluster: Para-nitrobenzyl esterase chain A; n=15;
           Staphylococcus|Rep: Para-nitrobenzyl esterase chain A -
           Staphylococcus epidermidis (strain ATCC 12228)
          Length = 455

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 21/80 (26%), Positives = 39/80 (48%)
 Frame = -1

Query: 451 QHFYPYKTLLVSSLGRNNLLYAYGNFFLIPSIKLDTTLSHQKMFHHLKNLSVVLFPVVTY 272
           +H++P KTL   +L  +++LY   +  +         L +Q +  H  + S+  FP  T+
Sbjct: 246 RHYFPNKTL--KTLTSDDILYLMESQKIERGRSRGLDLIYQPIKDHHMSRSIKKFPKPTF 303

Query: 271 IAHTHSHIRSTLFSPTRTFP 212
           +++TH      +   TRT P
Sbjct: 304 MSYTHDEGDIYIEDATRTLP 323


>UniRef50_A0C626 Cluster: Chromosome undetermined scaffold_151,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_151,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 663

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +1

Query: 139 KGDEKTTRQNLNLLSR-GLITNGKVTEKFELVKKVLIEYDC 258
           KGDEK  ++N+ L+   G   NG+V++ F ++    I+Y+C
Sbjct: 378 KGDEKGKQKNVELIQMCGRFENGEVSDAFNIITIHNIKYEC 418


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,875,616
Number of Sequences: 1657284
Number of extensions: 12489213
Number of successful extensions: 31963
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31957
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)