Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10o08
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069464-1|AAL39609.1|  632|Drosophila melanogaster LD19052p pro...    29   6.3  
AE014134-2189|AAF53180.3|  632|Drosophila melanogaster CG31761-P...    29   6.3  
AE014134-2188|AAF53181.2|  632|Drosophila melanogaster CG31761-P...    29   6.3  
AE014134-2187|AAO41184.1|  737|Drosophila melanogaster CG31761-P...    29   6.3  
AE014134-2186|ABI31310.1|  893|Drosophila melanogaster CG31761-P...    29   6.3  

>AY069464-1|AAL39609.1|  632|Drosophila melanogaster LD19052p
           protein.
          Length = 632

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = -1

Query: 475 SSTDNDRPQHFYPYKTLLVSSLGRNNLLYAYGNFFLIPSIKLDTTLSHQKMFHHLKNLSV 296
           ++T     + F+PY     S    NN + A        + K+ TTL  + + H+  N S 
Sbjct: 128 TTTFTGAAKSFHPYLRPTGSGSNSNNSIAALSTTTAATAAKMSTTL-FETLLHNQINSSP 186

Query: 295 VLFPVVTYIA 266
           +  P  T IA
Sbjct: 187 IALPAATAIA 196


>AE014134-2189|AAF53180.3|  632|Drosophila melanogaster CG31761-PC,
           isoform C protein.
          Length = 632

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = -1

Query: 475 SSTDNDRPQHFYPYKTLLVSSLGRNNLLYAYGNFFLIPSIKLDTTLSHQKMFHHLKNLSV 296
           ++T     + F+PY     S    NN + A        + K+ TTL  + + H+  N S 
Sbjct: 128 TTTFTGAAKSFHPYLRPTGSGSNSNNSIAALSTTTAATAAKMSTTL-FETLLHNQINSSP 186

Query: 295 VLFPVVTYIA 266
           +  P  T IA
Sbjct: 187 IALPAATAIA 196


>AE014134-2188|AAF53181.2|  632|Drosophila melanogaster CG31761-PA,
           isoform A protein.
          Length = 632

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = -1

Query: 475 SSTDNDRPQHFYPYKTLLVSSLGRNNLLYAYGNFFLIPSIKLDTTLSHQKMFHHLKNLSV 296
           ++T     + F+PY     S    NN + A        + K+ TTL  + + H+  N S 
Sbjct: 128 TTTFTGAAKSFHPYLRPTGSGSNSNNSIAALSTTTAATAAKMSTTL-FETLLHNQINSSP 186

Query: 295 VLFPVVTYIA 266
           +  P  T IA
Sbjct: 187 IALPAATAIA 196


>AE014134-2187|AAO41184.1|  737|Drosophila melanogaster CG31761-PD,
           isoform D protein.
          Length = 737

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = -1

Query: 475 SSTDNDRPQHFYPYKTLLVSSLGRNNLLYAYGNFFLIPSIKLDTTLSHQKMFHHLKNLSV 296
           ++T     + F+PY     S    NN + A        + K+ TTL  + + H+  N S 
Sbjct: 128 TTTFTGAAKSFHPYLRPTGSGSNSNNSIAALSTTTAATAAKMSTTL-FETLLHNQINSSP 186

Query: 295 VLFPVVTYIA 266
           +  P  T IA
Sbjct: 187 IALPAATAIA 196


>AE014134-2186|ABI31310.1|  893|Drosophila melanogaster CG31761-PE,
           isoform E protein.
          Length = 893

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = -1

Query: 475 SSTDNDRPQHFYPYKTLLVSSLGRNNLLYAYGNFFLIPSIKLDTTLSHQKMFHHLKNLSV 296
           ++T     + F+PY     S    NN + A        + K+ TTL  + + H+  N S 
Sbjct: 128 TTTFTGAAKSFHPYLRPTGSGSNSNNSIAALSTTTAATAAKMSTTL-FETLLHNQINSSP 186

Query: 295 VLFPVVTYIA 266
           +  P  T IA
Sbjct: 187 IALPAATAIA 196


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,587,077
Number of Sequences: 53049
Number of extensions: 597839
Number of successful extensions: 1299
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)