Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10o07
(428 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical pr... 33 0.087
AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical ... 33 0.087
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 33 0.087
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 33 0.087
AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical ... 30 0.61
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 30 0.81
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 30 0.81
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 30 0.81
AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical ... 29 1.1
AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical ... 29 1.1
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z82262-1|CAB05151.2| 361|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 28 3.3
U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical pr... 28 3.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 5.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 27 5.7
AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical ... 27 5.7
AC006627-5|AAO38662.1| 529|Caenorhabditis elegans Hypothetical ... 27 5.7
AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical ... 27 5.7
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 27 7.5
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 7.5
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 7.5
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 7.5
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 27 7.5
AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical ... 27 7.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 26 10.0
Z66494-3|CAA91258.2| 520|Caenorhabditis elegans Hypothetical pr... 26 10.0
U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical p... 26 10.0
U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical p... 26 10.0
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 26 10.0
>Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.1 bits (72), Expect = 0.087
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 117 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 257
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.1 bits (72), Expect = 0.087
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 117 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 257
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 33.1 bits (72), Expect = 0.087
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 117 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 257
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 33.1 bits (72), Expect = 0.087
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 79 LCWLWPTLKTQLR*WKTLTQETATNLLTTARTSLILPKITTLMETATNLSTTVHI---TW 249
LC+LW L T T T T T+ + T T++++ TT +TTV + T
Sbjct: 179 LCYLWVPLTTTTT--TTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTT 236
Query: 250 TLPA-DLTSSLPLS 288
T+P + T++ PL+
Sbjct: 237 TVPTNETTTTSPLN 250
>AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical
protein R52.6 protein.
Length = 151
Score = 30.3 bits (65), Expect = 0.61
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +1
Query: 127 TLTQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPADLTSSLPL 285
TL E T ++TT TS + K+ M AT + WTL P+
Sbjct: 47 TLPYEETTEMMTTMETSTMTEKVCPEMPAATACMDLTTLGWTLELGEVDGCPV 99
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.9 bits (64), Expect = 0.81
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +1
Query: 124 KTLTQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPADLTSSLPL 285
+T T T TTA T+ PK TT ETAT S+T +T P +TS+ L
Sbjct: 501 QTSTTVPTTPSKTTA-TTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTL 552
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 29.9 bits (64), Expect = 0.81
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +1
Query: 124 KTLTQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPADLTSSLPL 285
+T T T TTA T+ PK TT ETAT S+T +T P +TS+ L
Sbjct: 342 QTSTTVPTTPSKTTA-TTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTL 393
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 29.9 bits (64), Expect = 0.81
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +1
Query: 124 KTLTQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPADLTSSLPL 285
+T T T TTA T+ PK TT ETAT S+T +T P +TS+ L
Sbjct: 382 QTSTTVPTTPSKTTA-TTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTL 433
>AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical
protein C26G2.2 protein.
Length = 952
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 136 QETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPADLTSS 276
++T T+ + + I P++++ LSTT +T T P+ TSS
Sbjct: 421 EQTTTSKMPSTDDDYITPEMSSTASMEITLSTTSDLTSTYPSTFTSS 467
>AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical
protein R06B10.1 protein.
Length = 1236
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +3
Query: 132 DSGNGYEPIDNRPYIVNPPKDYNPNGNGY--EPIDNGAYY---VDPPRRPY 269
D+ N Y+P++ +VNP K + NG+ + + + A Y VDPP+ +
Sbjct: 824 DNANAYKPMNPIEMVVNPTKYAKKSSNGFMEKVVKDIAEYPKPVDPPKNSW 874
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 365 F*NIL-LIHYFVINFLRYSLLPTASTRERGRLEVRSAGRVHVICTVVDRFVAVSI 204
F N+L + Y V +FLR ++PT GR ++ + RV++ + FV +++
Sbjct: 270 FSNLLKTLSYEVKDFLRVFIVPTLGEYHEGRKQLENDSRVYMAVFYAEVFVKLTL 324
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 28.7 bits (61), Expect = 1.9
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 94 PTLKTQLR*WKTLTQET--ATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLP 258
P + T +R T T T A N+ TT T+ I P T T +TTV T T P
Sbjct: 17 PVITTTIRPNSTTTTTTSPAPNITTTTTTTTIAPPTNTTTTILTT-TTTVTTTTTSP 72
>Z82262-1|CAB05151.2| 361|Caenorhabditis elegans Hypothetical
protein C43F9.4 protein.
Length = 361
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 57 FFMIFVLALLAMANAQD---PVKVVENADSGNGYEPIDNRPYI 176
F++IF++ ++ M + D P+ +N D N +EP RP+I
Sbjct: 29 FWVIFIVIIVVMTHFNDYSEPIVPWDNCDMNNTWEP-TTRPFI 70
>Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical
protein F13H10.6 protein.
Length = 88
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +3
Query: 147 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPRRPYFKPTP 284
Y+P + P P P GY P G YY + PY+ P
Sbjct: 3 YQPYNQPPPYTQQPGYPPPGSAGYVP-QQGGYYPQGQQGPYYPQQP 47
>Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical
protein T05C12.4 protein.
Length = 630
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +1
Query: 124 KTLTQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPADLTSSLPLS 288
+T+T E ++L+ + T T T +TT+ T + P + +S P+S
Sbjct: 309 ETMTIEEESDLIDDVESEETTSTTTPRTTTTTTTTTTITTTTSAPTTIATSTPIS 363
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 121 WKTLTQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWT 252
WK T TT + + PK TTL +T T +T+ T T
Sbjct: 134 WKKFTTTEEPLETTTTKRIITTPKRTTLRKTTTTTTTSTTSTST 177
>U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical
protein F10G7.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 150 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 236
EP D P + V PP + PN NG P NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 147 YEPIDNRPYIVNPPKDYNPNGN-GYEPIDNGAYYVDPPRRPYFKPTPFPGA 296
Y +NRP+ V PP P + G PI + A PP P P GA
Sbjct: 598 YGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGA 648
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 147 YEPIDNRPYIVNPPKDYNPNGN-GYEPIDNGAYYVDPPRRPYFKPTPFPGA 296
Y +NRP+ V PP P + G PI + A PP P P GA
Sbjct: 424 YGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGA 474
>AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical
protein F56A11.6 protein.
Length = 442
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 272 EVRSAGRVHVICTVVDRFVAVSIRVVIFGRIND 174
EV++ VH +C V+ + I++V+F ND
Sbjct: 5 EVKNWRYVHPLCAVLANYFVFLIQLVLFAHAND 37
>AC006627-5|AAO38662.1| 529|Caenorhabditis elegans Hypothetical
protein E01A2.2b protein.
Length = 529
Score = 27.1 bits (57), Expect = 5.7
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 192 DYNPNGNGYEPIDNGAYYVDPPRRPYFKPTPFPGARGG 305
D P G G G Y RRP F P G RGG
Sbjct: 470 DRGPGGGGRNSFGGGGY----DRRPQFPPRHSLGGRGG 503
>AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical
protein E01A2.2a protein.
Length = 712
Score = 27.1 bits (57), Expect = 5.7
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 192 DYNPNGNGYEPIDNGAYYVDPPRRPYFKPTPFPGARGG 305
D P G G G Y RRP F P G RGG
Sbjct: 653 DRGPGGGGRNSFGGGGY----DRRPQFPPRHSLGGRGG 686
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 127 TLTQETATNLLTTARTS-LILPKITTLMETATNLSTTVHITWTLP 258
T T T T TT T +I P + T STT + +TLP
Sbjct: 420 TTTTTTTTEAPTTTTTEPIIYPPANFKKASKTTTSTTTEMIYTLP 464
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 127 TLTQETATNLLTTARTS-LILPKITTLMETATNLSTTVHITWTLP 258
T T T T TT T +I P + T STT + +TLP
Sbjct: 420 TTTTTTTTEAPTTTTTEPIIYPPANFKKASKTTTSTTTEMIYTLP 464
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 181 ILPKITTLMETATNLSTTVHITWTLPADLTSS 276
+ K T+L T+T T V +TW+LP +L S
Sbjct: 10438 VTSKPTSLQVTSTERET-VTLTWSLPTELNGS 10468
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 181 ILPKITTLMETATNLSTTVHITWTLPADLTSS 276
+ K T+L T+T T V +TW+LP +L S
Sbjct: 10458 VTSKPTSLQVTSTERET-VTLTWSLPTELNGS 10488
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 181 ILPKITTLMETATNLSTTVHITWTLPADLTSS 276
+ K T+L T+T T V +TW+LP +L S
Sbjct: 10458 VTSKPTSLQVTSTERET-VTLTWSLPTELNGS 10488
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 26.6 bits (56), Expect = 7.5
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 136 QETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPADLTSS 276
Q T T TTA T P +TT+ T+T TT T +P +TS+
Sbjct: 73 QATTTLSSTTASTVTPTPILTTVTTTST---TTTVTTTPIPTTVTST 116
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 127 TLTQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPADLTSSLPLSL 291
TL+ TA+ + T + + TT T T + TTV T T+S+P ++
Sbjct: 77 TLSSTTASTVTPTPILTTVTTTSTTTTVTTTPIPTTVTSTHIPTTVTTTSIPTTV 131
>AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical
protein Y71G12A.2 protein.
Length = 611
Score = 26.6 bits (56), Expect = 7.5
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = +1
Query: 82 CWLWPTLKTQLR*WKTLTQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPA 261
CW W T+ L + L + N+ + L L + L A L + TL
Sbjct: 405 CWTWWTVSESLSICQLLCDVSHLNVAPVILSRLHLARFDALFVLAKQLKLNPEDSETLGK 464
Query: 262 DLTSSLPLSL 291
L S P+SL
Sbjct: 465 WLLSIKPISL 474
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 26.2 bits (55), Expect = 10.0
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +3
Query: 108 PVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGY--EPIDNGAYYVDPPRRPYFKPT 281
PV + EN D P + PP P + + P+ NG ++ PP P P
Sbjct: 28 PVIIAENEDESEVSVTKQAPPSGILPPGQSIPKPSFFIPPPVPNG--FIPPPPGPGGIPP 85
Query: 282 PFPGARGG 305
P P GG
Sbjct: 86 PPPMFAGG 93
>Z66494-3|CAA91258.2| 520|Caenorhabditis elegans Hypothetical
protein C34C6.3 protein.
Length = 520
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 184 LPKITTLMETATNLSTTVHITWTLPADLTSSLPLSLVLAVG-SKEYLRKLITK 339
+PK T T N+ ++ +++W PA S+ + L+ + G + E L +IT+
Sbjct: 38 VPKPTKPFYTTFNIGSSYNVSWITPAASNSTYRIRLIDSDGLTVEQLPGVITE 90
>U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical
protein F01F1.1c protein.
Length = 641
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +3
Query: 126 NADSGNGYEPIDNRPY-IVNPPKDYNPNGNGYEPIDNGAYYVDPPRRP 266
N ++ G N + NPP Y G G+ P G+ + PP P
Sbjct: 38 NGNNNTGQNSWMNNSFSFPNPPSAYGQFGGGFHPSTWGSGPIVPPPPP 85
>U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical
protein F01F1.1a protein.
Length = 646
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +3
Query: 126 NADSGNGYEPIDNRPY-IVNPPKDYNPNGNGYEPIDNGAYYVDPPRRP 266
N ++ G N + NPP Y G G+ P G+ + PP P
Sbjct: 43 NGNNNTGQNSWMNNSFSFPNPPSAYGQFGGGFHPSTWGSGPIVPPPPP 90
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 124 KTLTQETATNLLTTARTSLILPKITTLM---ETATNLSTTVHITWTLPADLTSS 276
KT + + L ++ +L++P +T++ ET T +TT T+P+ TSS
Sbjct: 111 KTGEPDKPSLLDSSINATLVVPPNSTIIIDTETTTTFTTTTEKPTTIPSTTTSS 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,379,067
Number of Sequences: 27780
Number of extensions: 206087
Number of successful extensions: 623
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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