Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10n19
         (289 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   0.99 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   2.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   4.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    20   7.0  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     20   7.0  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   7.0  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 0.99
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -3

Query: 284 FLILFFYFHLVHYYLAANPLHVFVYVQYLS---IGYILIHL 171
           FL++F Y   V   + AN ++  + +  +S   I Y +IH+
Sbjct: 4   FLVIFVYILSVAVIIRANGINEILKIMAVSMKDIRYCIIHM 44


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 78  CGIVVLYHNIWYNSKSTY 131
           CGI VL+  ++Y   ST+
Sbjct: 9   CGIAVLFLALYYYLTSTF 26


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 164 FPANVLRCNQWINIVRRQR 220
           FPA  +  + +I ++RRQR
Sbjct: 177 FPALNIVADSFIELIRRQR 195


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 99  HNIWYNSKST 128
           HN++YNS S+
Sbjct: 262 HNLYYNSPSS 271


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +2

Query: 194 WINIVRRQRHEEDW 235
           WI+ +  Q  EE W
Sbjct: 356 WIDAIMTQLREEGW 369


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 215 VYVQYLSIGYILIHL 171
           V V  L  GY+LIH+
Sbjct: 58  VLVILLRAGYVLIHI 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,992
Number of Sequences: 438
Number of extensions: 1513
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5744526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)