Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10n04
(668 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X80695-1|CAA56712.1| 435|Homo sapiens OXA1Hs protein. 104 2e-22
BC112331-1|AAI12332.1| 496|Homo sapiens oxidase (cytochrome c) ... 104 2e-22
BC001669-1|AAH01669.2| 437|Homo sapiens OXA1L protein protein. 104 2e-22
AJ001981-1|CAA05127.1| 495|Homo sapiens OXA1L protein. 104 2e-22
BC101684-1|AAI01685.1| 333|Homo sapiens COX18 cytochrome c oxid... 44 7e-04
AY957565-1|AAY35061.1| 333|Homo sapiens mitochondrial COX18 pro... 44 7e-04
AY957564-1|AAY35060.1| 333|Homo sapiens mitochondrial COX18 pro... 44 7e-04
AK096310-1|BAC04758.1| 333|Homo sapiens protein ( Homo sapiens ... 44 7e-04
BC071812-1|AAH71812.1| 156|Homo sapiens COX18 protein protein. 36 0.17
BC110806-1|AAI10807.1| 234|Homo sapiens hypothetical LOC441177 ... 32 1.6
AK094116-1|BAC04291.1| 234|Homo sapiens protein ( Homo sapiens ... 32 1.6
>X80695-1|CAA56712.1| 435|Homo sapiens OXA1Hs protein.
Length = 435
Score = 104 bits (250), Expect = 2e-22
Identities = 43/98 (43%), Positives = 68/98 (69%)
Frame = +1
Query: 370 EPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSA 549
E +FA +GLG + PVGL+QN E++HV L +PWWGAI T+ R ++FPL++ QR +A
Sbjct: 108 EQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAA 167
Query: 550 QMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLF 663
+++N+LPEIQ ++ +A+ G+ IE + + EM L+
Sbjct: 168 RIHNHLPEIQKFSSRIREAKLAGDHIEYYKASSEMALY 205
>BC112331-1|AAI12332.1| 496|Homo sapiens oxidase (cytochrome c)
assembly 1-like protein.
Length = 496
Score = 104 bits (250), Expect = 2e-22
Identities = 43/98 (43%), Positives = 68/98 (69%)
Frame = +1
Query: 370 EPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSA 549
E +FA +GLG + PVGL+QN E++HV L +PWWGAI T+ R ++FPL++ QR +A
Sbjct: 168 EQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAA 227
Query: 550 QMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLF 663
+++N+LPEIQ ++ +A+ G+ IE + + EM L+
Sbjct: 228 RIHNHLPEIQKFSSRIREAKLAGDHIEYYKASSEMALY 265
>BC001669-1|AAH01669.2| 437|Homo sapiens OXA1L protein protein.
Length = 437
Score = 104 bits (250), Expect = 2e-22
Identities = 43/98 (43%), Positives = 68/98 (69%)
Frame = +1
Query: 370 EPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSA 549
E +FA +GLG + PVGL+QN E++HV L +PWWGAI T+ R ++FPL++ QR +A
Sbjct: 110 EQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAA 169
Query: 550 QMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLF 663
+++N+LPEIQ ++ +A+ G+ IE + + EM L+
Sbjct: 170 RIHNHLPEIQKFSSRIREAKLAGDHIEYYKASSEMALY 207
>AJ001981-1|CAA05127.1| 495|Homo sapiens OXA1L protein.
Length = 495
Score = 104 bits (250), Expect = 2e-22
Identities = 43/98 (43%), Positives = 68/98 (69%)
Frame = +1
Query: 370 EPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSA 549
E +FA +GLG + PVGL+QN E++HV L +PWWGAI T+ R ++FPL++ QR +A
Sbjct: 168 EQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAA 227
Query: 550 QMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLF 663
+++N+LPEIQ ++ +A+ G+ IE + + EM L+
Sbjct: 228 RIHNHLPEIQKFSSRIREAKLAGDHIEYYKASSEMALY 265
>BC101684-1|AAI01685.1| 333|Homo sapiens COX18 cytochrome c oxidase
assembly homolog (S. cerevisiae) protein.
Length = 333
Score = 43.6 bits (98), Expect = 7e-04
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 334 AVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR-VV 510
AV+ V + ANG L PV + + +H +PWWG+I+L T+ +R V
Sbjct: 42 AVAPVSAVHANGWYE----ALAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALRGAV 97
Query: 511 MFPLVILSQRNSAQMNNNLPEIQLLQMKMTQ 603
PL A++ N PEI+ + + Q
Sbjct: 98 TLPLAAYQHYILAKVENLQPEIKTIARHLNQ 128
>AY957565-1|AAY35061.1| 333|Homo sapiens mitochondrial COX18
protein.
Length = 333
Score = 43.6 bits (98), Expect = 7e-04
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 334 AVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR-VV 510
AV+ V + ANG L PV + + +H +PWWG+I+L T+ +R V
Sbjct: 42 AVAPVSAVHANGWYE----ALAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALRGAV 97
Query: 511 MFPLVILSQRNSAQMNNNLPEIQLLQMKMTQ 603
PL A++ N PEI+ + + Q
Sbjct: 98 TLPLAAYQHYILAKVENLQPEIKTIARHLNQ 128
>AY957564-1|AAY35060.1| 333|Homo sapiens mitochondrial COX18
protein.
Length = 333
Score = 43.6 bits (98), Expect = 7e-04
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 334 AVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR-VV 510
AV+ V + ANG L PV + + +H +PWWG+I+L T+ +R V
Sbjct: 42 AVAPVSAVHANGWYE----ALAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALRGAV 97
Query: 511 MFPLVILSQRNSAQMNNNLPEIQLLQMKMTQ 603
PL A++ N PEI+ + + Q
Sbjct: 98 TLPLAAYQHYILAKVENLQPEIKTIARHLNQ 128
>AK096310-1|BAC04758.1| 333|Homo sapiens protein ( Homo sapiens
cDNA FLJ38991 fis, clone NT2RI2008622. ).
Length = 333
Score = 43.6 bits (98), Expect = 7e-04
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 334 AVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR-VV 510
AV+ V + ANG L PV + + +H +PWWG+I+L T+ +R V
Sbjct: 42 AVAPVSAVHANGWYE----ALAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALRGAV 97
Query: 511 MFPLVILSQRNSAQMNNNLPEIQLLQMKMTQ 603
PL A++ N PEI+ + + Q
Sbjct: 98 TLPLAAYQHYILAKVENLQPEIKTIARHLNQ 128
>BC071812-1|AAH71812.1| 156|Homo sapiens COX18 protein protein.
Length = 156
Score = 35.5 bits (78), Expect = 0.17
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 334 AVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR-VV 510
AV+ V + ANG L PV + + +H +PWWG+I+L T+ +R V
Sbjct: 42 AVAPVSAVHANGWYE----ALAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALRGAV 97
Query: 511 MFPL 522
PL
Sbjct: 98 TLPL 101
>BC110806-1|AAI10807.1| 234|Homo sapiens hypothetical LOC441177
protein.
Length = 234
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 476 APHHGTSKVTCRYSKQFCTNPTGPQP-PRPMLANVG 372
AP + S V+ + Q CT P PQP PRP+ VG
Sbjct: 85 APEYINSAVSSQTLSQSCTPPQSPQPDPRPLSLRVG 120
>AK094116-1|BAC04291.1| 234|Homo sapiens protein ( Homo sapiens
cDNA FLJ36797 fis, clone ADRGL2006846. ).
Length = 234
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 476 APHHGTSKVTCRYSKQFCTNPTGPQP-PRPMLANVG 372
AP + S V+ + Q CT P PQP PRP+ VG
Sbjct: 85 APEYINSAVSSQTLSQSCTPPQSPQPDPRPLSLRVG 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,617,724
Number of Sequences: 237096
Number of extensions: 2176329
Number of successful extensions: 5486
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5477
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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