Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10n02
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    25   1.6  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   4.8  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   6.4  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       23   8.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   8.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.4  

>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -2

Query: 647 PFLVASHSDTLVY*QQQNYLACLYCSDSELIYHLANLLTEIQFYLLKLATIYL 489
           PF + +HS  LVY Q   +   L+     L+  L  LL    FY+ K   +YL
Sbjct: 455 PFCIETHSLGLVYNQTLLWFGVLFAPPLLLLVALKLLLV---FYVNKCELMYL 504


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -2

Query: 644 FLVASHSDTLVY*QQQNYLACLYCSDSELIYHLANLLTEIQFYLLKLATIYLRNSS 477
           F ++ H   ++Y Q   +L   Y   +  +  +A LLT + FY+ K A +   N S
Sbjct: 436 FELSKHVLDVIYSQTLCWLGTFY---APFLPAIAALLTFLMFYIKKFACLVNSNPS 488


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 261 CQLQTMDLLCWAPTLLLEQLYQITT 335
           C L+ +   C A  +LL QLY + T
Sbjct: 243 CMLRLVHAFCEAAPMLLLQLYVLVT 267


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 452 QYVTKISLEKNFLGIWWPVSTSKTVFQLTDSLN 550
           +++ ++ LE N  G      TS T+F+   S+N
Sbjct: 491 EFIHRVELEINEKGTEGGAITSSTIFRALPSIN 523


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 290  LGSNVTFRAIVSDYNEETLKYSFF 361
            +G N    +++ D NE+ +K  FF
Sbjct: 2036 IGKNQMMESLIFDENEQVIKKVFF 2059


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 13/60 (21%), Positives = 29/60 (48%)
 Frame = +2

Query: 254 LKLSITNNGPAVLGSNVTFRAIVSDYNEETLKYSFFDDLRHSESFIEAKNSCTWIVEYPR 433
           L  +I  + P  + +    R+++ D ++E+ +Y+FF      ++  +  N C  I +  R
Sbjct: 214 LAFNIQVDNPICVLNQDLARSLLKD-SDESKQYTFFSKATQIDTIKQKLNECAVIAKKAR 272


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -1

Query: 513 VETGHHIPKKFFSREILVTYCPAL 442
           V++G +IPK+   RE++  + P+L
Sbjct: 482 VKSGRYIPKEELQREMIDGHRPSL 505


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,536
Number of Sequences: 2352
Number of extensions: 13401
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)