Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10n02
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL157398-6|CAI41194.1|  117|Homo sapiens nebulette protein.            32   1.6  
Y16241-1|CAA76130.1| 1014|Homo sapiens nebulette protein.              31   2.7  
BC110453-1|AAI10454.1| 1014|Homo sapiens nebulette protein.            31   2.7  
BC110452-1|AAI10453.1|  716|Homo sapiens NEBL protein protein.         31   2.7  
AL157398-5|CAI41193.1|  231|Homo sapiens nebulette protein.            31   2.7  
AL157398-4|CAC19642.1| 1014|Homo sapiens nebulette protein.            31   2.7  

>AL157398-6|CAI41194.1|  117|Homo sapiens nebulette protein.
          Length = 117

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
 Frame = +2

Query: 272 NNGPAVLGSNVTFRAIVSDYNEETLKY--SFFDDLRHSESFIEAKNSCTWIVEYP--RHL 439
           NN  A L   V ++ ++ D + E  +       D+R+ E F ++K+ CT++ + P   H+
Sbjct: 3   NNCTASL-MKVFYKPVIEDLSMELARKCTELISDIRYKEEFKKSKDKCTFVTDSPMLNHV 61

Query: 440 YKAGQYVTK 466
              G ++++
Sbjct: 62  KNIGAFISE 70


>Y16241-1|CAA76130.1| 1014|Homo sapiens nebulette protein.
          Length = 1014

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
 Frame = +2

Query: 302 VTFRAIVSDYNEETLKY--SFFDDLRHSESFIEAKNSCTWIVEYP--RHLYKAGQYVTK 466
           V ++ ++ D + E  +       D+R+ E F ++K+ CT++ + P   H+   G ++++
Sbjct: 28  VFYKPVIEDLSMELARKCTELISDIRYKEEFKKSKDKCTFVTDSPMLNHVKNIGAFISE 86


>BC110453-1|AAI10454.1| 1014|Homo sapiens nebulette protein.
          Length = 1014

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
 Frame = +2

Query: 302 VTFRAIVSDYNEETLKY--SFFDDLRHSESFIEAKNSCTWIVEYP--RHLYKAGQYVTK 466
           V ++ ++ D + E  +       D+R+ E F ++K+ CT++ + P   H+   G ++++
Sbjct: 28  VFYKPVIEDLSMELARKCTELISDIRYKEEFKKSKDKCTFVTDSPMLNHVKNIGAFISE 86


>BC110452-1|AAI10453.1|  716|Homo sapiens NEBL protein protein.
          Length = 716

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
 Frame = +2

Query: 302 VTFRAIVSDYNEETLKY--SFFDDLRHSESFIEAKNSCTWIVEYP--RHLYKAGQYVTK 466
           V ++ ++ D + E  +       D+R+ E F ++K+ CT++ + P   H+   G ++++
Sbjct: 28  VFYKPVIEDLSMELARKCTELISDIRYKEEFKKSKDKCTFVTDSPMLNHVKNIGAFISE 86


>AL157398-5|CAI41193.1|  231|Homo sapiens nebulette protein.
          Length = 231

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
 Frame = +2

Query: 302 VTFRAIVSDYNEETLKY--SFFDDLRHSESFIEAKNSCTWIVEYP--RHLYKAGQYVTK 466
           V ++ ++ D + E  +       D+R+ E F ++K+ CT++ + P   H+   G ++++
Sbjct: 28  VFYKPVIEDLSMELARKCTELISDIRYKEEFKKSKDKCTFVTDSPMLNHVKNIGAFISE 86


>AL157398-4|CAC19642.1| 1014|Homo sapiens nebulette protein.
          Length = 1014

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
 Frame = +2

Query: 302 VTFRAIVSDYNEETLKY--SFFDDLRHSESFIEAKNSCTWIVEYP--RHLYKAGQYVTK 466
           V ++ ++ D + E  +       D+R+ E F ++K+ CT++ + P   H+   G ++++
Sbjct: 28  VFYKPVIEDLSMELARKCTELISDIRYKEEFKKSKDKCTFVTDSPMLNHVKNIGAFISE 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,226,996
Number of Sequences: 237096
Number of extensions: 1647003
Number of successful extensions: 2926
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2926
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)