Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10m24
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-1|CAB02090.1| 457|Caenorhabditis elegans Hypothetical pr... 154 6e-38
Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 29 4.1
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 29 4.1
Z92817-1|CAB07296.1| 367|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF099913-2|AAC68749.1| 254|Caenorhabditis elegans Hypothetical ... 28 7.1
Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical pr... 27 9.4
U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical p... 27 9.4
U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z79754-1|CAB02090.1| 457|Caenorhabditis elegans Hypothetical
protein F25H2.1 protein.
Length = 457
Score = 154 bits (373), Expect = 6e-38
Identities = 79/180 (43%), Positives = 111/180 (61%)
Frame = +1
Query: 130 MPNDTNEERRRRVLLGPLPAGFLRADATSDGVDSDYEXXXXXXXXXYGAAVPQSGPPMTA 309
M +T ERRR+VL+G LP FLR V + VP P
Sbjct: 1 MNTETVAERRRQVLVGELPPHFLRL-----AVPIQQTAEPEIVQPRMVSFVP---PNTRG 52
Query: 310 RLSVTIAQAKLVKNYGLTRMDPYVRVRVGHCIYETHTDPSGGKTPRWNKVIHCLLPPGVN 489
RLSVTI +A LVKNYGL RMDPY RVRVG+ ++T+ + G+ P WN+ ++ LP V
Sbjct: 53 RLSVTILEANLVKNYGLVRMDPYCRVRVGNVEFDTNVAANAGRAPTWNRTLNAYLPMNVE 112
Query: 490 TIYLEIFDECSFTMDELIAWTHITIPQAVLNGETHEDWYPLNGKQGDGLEGMINLVMSYS 669
+IY++IFDE +F DE+IAW HI +P A+ NG+ ++++ L+G+QG+G EGMI+L S++
Sbjct: 113 SIYIQIFDEKAFGPDEVIAWAHIMLPLAIFNGDNIDEYFQLSGQQGEGKEGMIHLHFSFA 172
>Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical
protein ZK666.7 protein.
Length = 403
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 228 VHTVRSSISTKKTCWKRT*QYSTTTFFICIIRHC 127
V V+SS S+ KTCW+ T + S T ++C + C
Sbjct: 360 VVNVQSSSSSAKTCWQNT-KSSLTNMYVCEVATC 392
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 273 CCSTTKWPSNDSETKCHYSSS*AC*KLWTNSYGPVCSCACWT 398
C TTK N++ +KCH C K+ + P C ACW+
Sbjct: 514 CFGTTKCSDNEAWSKCH-----NCEKVCFQTANPSCK-ACWS 549
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 273 CCSTTKWPSNDSETKCHYSSS*AC*KLWTNSYGPVCSCACWT 398
C TTK N++ +KCH C K+ + P C ACW+
Sbjct: 514 CFGTTKCSDNEAWSKCH-----NCEKVCFQTANPSCK-ACWS 549
>Z92817-1|CAB07296.1| 367|Caenorhabditis elegans Hypothetical
protein W08G11.1 protein.
Length = 367
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 529 MDELIAWTHITIPQAVLNGETHEDWYPLNGKQGDGLEGMI 648
+ +L+ WT I Q GE+ ++ + G + DGL G +
Sbjct: 158 ISKLMGWTKDEIGQLAYPGESVSMYHAMKGHRLDGLSGFV 197
>AF099913-2|AAC68749.1| 254|Caenorhabditis elegans Hypothetical
protein C29F9.8 protein.
Length = 254
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 451 NKVIHCLLPPGVNTIY 498
N ++HCLL GVNT+Y
Sbjct: 140 NAILHCLLCLGVNTLY 155
>Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical
protein R06A4.2 protein.
Length = 837
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 648 DHPFQAVPLFSIQGVPVFVSFTIQNGLRYSDVGP 547
D P A P+F + +P +S + NGL+ +++ P
Sbjct: 691 DIPRSAEPVFKVPMIPNRLSHSASNGLKPAEISP 724
>U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical
protein D2092.1a protein.
Length = 804
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 370 DPYVRVRV-GHCIYETHTDPSGGKTPRWNKVIHCLLPPGVNTIYLEIFDECSFTMDELIA 546
DPYV+ R + +Y++ T P W++ ++ I LE+FD F D+ +
Sbjct: 79 DPYVKFRYKDNIVYKSGTIFKN-LNPSWDEEFQMIVDDVTCPIRLEVFDFDRFCTDDFMG 137
Query: 547 WTHITIPQ 570
+ + Q
Sbjct: 138 AAEVDMSQ 145
>U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical
protein D2092.1b protein.
Length = 890
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 370 DPYVRVRV-GHCIYETHTDPSGGKTPRWNKVIHCLLPPGVNTIYLEIFDECSFTMDELIA 546
DPYV+ R + +Y++ T P W++ ++ I LE+FD F D+ +
Sbjct: 165 DPYVKFRYKDNIVYKSGTIFKN-LNPSWDEEFQMIVDDVTCPIRLEVFDFDRFCTDDFMG 223
Query: 547 WTHITIPQ 570
+ + Q
Sbjct: 224 AAEVDMSQ 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,513,659
Number of Sequences: 27780
Number of extensions: 333846
Number of successful extensions: 805
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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