Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10m19
(633 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0227 + 11934530-11934638,11937206-11937351,11937492-119376... 160 7e-40
12_01_0813 + 7475591-7475693,7476972-7477117,7477205-7477324,747... 155 3e-38
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 110 1e-24
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 109 2e-24
03_01_0215 + 1696250-1696573,1697653-1697793,1698267-1698539,169... 100 8e-22
04_04_1543 - 34270578-34270718,34271069-34271341,34271782-342719... 96 2e-20
04_01_0026 - 354855-354876,355184-355248,355710-355817,356215-35... 84 1e-16
07_03_1324 - 25825153-25825197,25825705-25825785,25825907-258259... 80 1e-15
06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-56... 77 1e-14
08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104... 76 3e-14
06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660,523... 75 5e-14
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 75 6e-14
10_07_0162 - 13713504-13714754,13716445-13716522 29 2.3
06_02_0369 - 15260013-15260273,15260367-15260516,15261518-152615... 29 2.3
03_02_0271 + 7029410-7029949,7030054-7030566 29 2.3
03_02_0147 - 5923117-5923215,5923882-5924069,5924885-5924977,592... 29 2.3
07_03_1713 + 28939446-28939574,28939674-28940231,28940338-289404... 29 4.1
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 28 5.4
06_01_1161 - 9872947-9873800,9874187-9874331,9874628-9874681 28 5.4
05_07_0306 - 29108860-29109282,29109425-29110441 28 5.4
05_06_0101 - 25581800-25581943,25582030-25582095,25582268-255823... 28 5.4
03_05_0384 - 23671097-23671201,23671343-23671429,23671542-236716... 28 5.4
04_04_1659 - 35127145-35127204,35127324-35127464,35127597-351276... 28 7.1
03_06_0407 - 33714563-33714636,33714966-33715152,33715943-337160... 28 7.1
08_02_0037 + 11480213-11481013,11483612-11483707 27 9.4
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 27 9.4
03_05_0461 + 24549079-24550464 27 9.4
02_02_0191 + 7642942-7642944,7643405-7643513,7643578-7643886,764... 27 9.4
01_02_0096 - 11081051-11081101,11081235-11081537 27 9.4
>11_03_0227 +
11934530-11934638,11937206-11937351,11937492-11937611,
11937731-11937898,11938534-11938623,11938920-11939018
Length = 243
Score = 160 bits (389), Expect = 7e-40
Identities = 68/119 (57%), Positives = 99/119 (83%)
Frame = +1
Query: 271 RAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSD 450
R +L+GPPGSGKGTQ+P +K++YC+CHL+TGDMLRA V++ + LG + K+ MD+G+LVSD
Sbjct: 32 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSD 91
Query: 451 EMVVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLL 627
++VV +ID+ + +P C+ GF+LDGFPRTV QA+KLD++L K+ T +D V+ F I+DS+L
Sbjct: 92 DLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKKGTKVDKVLNFAIDDSIL 150
>12_01_0813 +
7475591-7475693,7476972-7477117,7477205-7477324,
7477445-7477612,7478252-7478341,7478941-7479039
Length = 241
Score = 155 bits (376), Expect = 3e-38
Identities = 65/119 (54%), Positives = 98/119 (82%)
Frame = +1
Query: 271 RAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSD 450
R +L+GPPG GKGTQ+P +K+++C+CHL+TGDMLRA V++ + LG + K+ MD+G+LVSD
Sbjct: 30 RVILVGPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSD 89
Query: 451 EMVVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLL 627
++VV +ID+ + + C+ GF+LDGFPRTV QA+KLD++LAK+ T +D V+ F I+D++L
Sbjct: 90 DLVVGIIDEAMKKTSCQKGFILDGFPRTVVQAQKLDEMLAKQGTKIDKVLNFAIDDAIL 148
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 110 bits (264), Expect = 1e-24
Identities = 54/115 (46%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Frame = +1
Query: 223 AAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDL 402
AAAA K P ++ ++ G P SGKGTQ + EKY + H+STGD+LRAEVSSG+++
Sbjct: 81 AAAARKEAP------LKVMISGAPASGKGTQCRMIVEKYGLVHISTGDLLRAEVSSGTEI 134
Query: 403 GRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECK-NGFLLDGFPRTVPQAEKLDDL 564
G++ K+ MD G LV D++V DM+ L QP+ + G+LLDG+PR+ QA+ L+ +
Sbjct: 135 GKKAKEYMDNGMLVPDQVVTDMVVSRLSQPDVRERGWLLDGYPRSYAQAQSLESM 189
>08_01_0066 -
455589-455687,455902-455976,456531-456677,457158-457292,
457380-457508,457719-457814,458212-458403
Length = 290
Score = 109 bits (262), Expect = 2e-24
Identities = 59/138 (42%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Frame = +1
Query: 220 PAAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSD 399
P AA + DPL + ++ G P SGKGTQ +K KY + H+S GD+LRAE+++GS+
Sbjct: 60 PRAAKVVVAVKADPL--KVMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAEIAAGSE 117
Query: 400 LGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPEC-KNGFLLDGFPRTVPQAEKLDDLLAKR 576
G+R K+ M++G+LV DE+VV+M+ + L QP+ + G+LLDG+PR+ QA L+ L +
Sbjct: 118 NGKRAKEFMEKGQLVPDEIVVNMVKERLLQPDAQEKGWLLDGYPRSYSQAMALETLNIRP 177
Query: 577 KTALDAVIEFGIEDSLLV 630
D I + D LLV
Sbjct: 178 ----DIFILLDVPDELLV 191
>03_01_0215 +
1696250-1696573,1697653-1697793,1698267-1698539,
1698755-1698814,1698890-1699033
Length = 313
Score = 100 bits (240), Expect = 8e-22
Identities = 55/138 (39%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
Frame = +1
Query: 223 AAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDL 402
AAA + + ++ V LG PG GKGT A RL V H++TGD++R E++S L
Sbjct: 46 AAAGRARQRVAEERNVQWVFLGCPGVGKGTYASRLSRLLGVPHIATGDLVRDELASSGPL 105
Query: 403 GRRLKKVMDEGKLVSDEMVVDMIDKNLDQPE--CKNGFLLDGFPRTVPQAEKLDDLLAKR 576
+L +++++GKLVSDE++++++ K L + E ++GF+LDGFPRTV QAE LD +
Sbjct: 106 SVQLAEIVNQGKLVSDEIIINLLSKRLKKGEEQGESGFILDGFPRTVKQAEILDGV---- 161
Query: 577 KTALDAVIEFGIEDSLLV 630
T +D V+ + + +LV
Sbjct: 162 -TDIDMVVNLKLREDVLV 178
>04_04_1543 -
34270578-34270718,34271069-34271341,34271782-34271922,
34272365-34272667
Length = 285
Score = 96.3 bits (229), Expect = 2e-20
Identities = 54/142 (38%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Frame = +1
Query: 217 APAAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGS 396
A A + + +ED ++ V LG PG GKGT A RL + V H++TGD++R ++S
Sbjct: 37 AVARRGREREREEDGRRVQWVFLGCPGVGKGTYASRLSQMLRVPHIATGDLVRDALASPG 96
Query: 397 DLGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKN--GFLLDGFPRTVPQAEKLDDLLA 570
+L ++++ GKLVSDE++++++ K L++ K GF+LDGFPRT+ QAE L+ +
Sbjct: 97 PFSEQLAEIVNNGKLVSDEIIINLLSKRLEEGAEKGELGFILDGFPRTIRQAEILEGV-- 154
Query: 571 KRKTALDAVIEFGI-EDSLLVR 633
T +D VI + E++LL +
Sbjct: 155 ---TDIDLVINLKLREEALLAK 173
>04_01_0026 -
354855-354876,355184-355248,355710-355817,356215-356295,
356729-356885,356990-357107,357485-357533,357806-357901
Length = 231
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/86 (44%), Positives = 57/86 (66%)
Frame = +1
Query: 274 AVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDE 453
A +LG PGSGKGTQ R+ + HLS GD+LR+E+S+G + G + ++ EGK+V E
Sbjct: 45 AFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEISTGGEKGELILNIIKEGKIVPSE 104
Query: 454 MVVDMIDKNLDQPECKNGFLLDGFPR 531
+ V++I K ++ + K L+DGFPR
Sbjct: 105 ITVELIRKAMESSDAKR-VLIDGFPR 129
>07_03_1324 -
25825153-25825197,25825705-25825785,25825907-25825967,
25826005-25826060,25826171-25826239,25826366-25826473,
25826555-25826635,25826795-25826951,25827060-25827177,
25827285-25827339,25827779-25827814
Length = 288
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/84 (44%), Positives = 56/84 (66%)
Frame = +1
Query: 280 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMV 459
+LG PGSGKGTQ + E + HLS GD+LRAE+ SGS+ G ++ ++ EGK+V E+
Sbjct: 29 VLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSEVT 88
Query: 460 VDMIDKNLDQPECKNGFLLDGFPR 531
+ ++ + + E + FL+DGFPR
Sbjct: 89 IKLLQDAMIKNE-NDKFLIDGFPR 111
>06_01_0067 +
561910-561987,562698-562759,564293-564338,564701-564758,
564892-565009,565130-565286,565611-565718,565884-565955,
566058-566174,566309-566404
Length = 303
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/84 (41%), Positives = 57/84 (67%)
Frame = +1
Query: 280 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMV 459
++G PGSGKGTQ ++ +++ HLS GD+LR E ++ G +K +M+EGKLVS +++
Sbjct: 80 VIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLMNEGKLVSSDLI 139
Query: 460 VDMIDKNLDQPECKNGFLLDGFPR 531
V ++ K + + + FL+DGFPR
Sbjct: 140 VKLLFKAM-RESGNDKFLVDGFPR 162
>08_01_0130 +
1040696-1041049,1042135-1042275,1042422-1042673,
1043797-1043904,1044289-1044593,1044720-1044841,
1044979-1045225,1045308-1045365,1045414-1045530,
1045718-1045753,1046492-1046554,1046958-1047047,
1047241-1047399,1047475-1047596,1048145-1048217,
1048307-1048375
Length = 771
Score = 75.8 bits (178), Expect = 3e-14
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Frame = +1
Query: 265 GIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLV 444
G + V++G PG K A RL E V ++S G ++R E+S S L +++ ++EGKLV
Sbjct: 70 GPQWVVMGRPGPQKHAHAARLAEVLAVPYISMGTLVRQELSPASSLYKKIANSVNEGKLV 129
Query: 445 SDEMVVDMIDKNLDQPECK--NGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIED 618
++++ ++ K L++ K GF+LDG PRT QAE LD+++ +D V+ F D
Sbjct: 130 PEDIIFGLLTKRLEEGYNKGETGFILDGIPRTHMQAEILDEIV-----DIDLVLNFKCAD 184
Query: 619 SLLVR 633
+ ++
Sbjct: 185 NCFMK 189
>06_01_0718 +
5233030-5233062,5233329-5233383,5233543-5233660,
5233746-5233902,5234033-5234113,5234213-5234320,
5234448-5234483
Length = 195
Score = 74.9 bits (176), Expect = 5e-14
Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Frame = +1
Query: 220 PAAAATKLKPDEDPLGIRAV----LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVS 387
P K +E+ LG + V +LG PGSGKGTQ + E + HLS G++LRAE++
Sbjct: 4 PDVLTEKKDINENMLGGKKVKIIFVLGGPGSGKGTQCSNIVEHFGFIHLSAGELLRAEIN 63
Query: 388 SGSDLGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKNGFLLDGFPR 531
SGS+ G + ++ EGK+V E+ + ++ + + + + +++DGFPR
Sbjct: 64 SGSENGTMIDTIITEGKIVPSEITIKLLQEAIIKGG-NDKYIIDGFPR 110
>02_05_0942 +
32970537-32970581,32971059-32971113,32971300-32971417,
32971567-32971615,32971637-32971723,32971890-32971970,
32972074-32972181,32972432-32972503,32973218-32973250
Length = 215
Score = 74.5 bits (175), Expect = 6e-14
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 217 APAAAATKLKPDEDPLGIRAV----LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEV 384
AP A + + ++ LG + V +LG PGSGKGTQ + E + HLS GD+LRAE+
Sbjct: 7 APTVVAGQEEVTDNMLGDKKVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEI 66
Query: 385 SSGSDLGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKNGFLLDGFPR 531
SGS+ G ++ ++ EGK+V E MI D+ FL+DGFPR
Sbjct: 67 KSGSENGTMIENMIKEGKIVPSEEA--MIKSGNDK------FLIDGFPR 107
>10_07_0162 - 13713504-13714754,13716445-13716522
Length = 442
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 289 PPGSGKGTQAPRLKEKYCVCHLSTG 363
PPG+G +AP ++ C C L TG
Sbjct: 15 PPGAGVRVRAPLVESVSCYCRLDTG 39
>06_02_0369 -
15260013-15260273,15260367-15260516,15261518-15261577,
15262114-15262241,15262559-15262654,15262655-15263039
Length = 359
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 116 NFFVMDFVSLCLSAISICLYRALIN*RLKNLMIWHRPLQPRN 241
NF + L +++ +CLY + L ++HR L+P+N
Sbjct: 131 NFTFLKSHFLACASVVVCLYSYITTFTLNQANVYHRDLKPKN 172
>03_02_0271 + 7029410-7029949,7030054-7030566
Length = 350
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
Frame = +1
Query: 142 PLPVGYFDLSVQGSN*LKA*EFDDMAPAAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAP 321
PLP F G D + P A P+E+ +G+ +
Sbjct: 64 PLPAHCFPALPVGDQLFNRLRLDGLVPPTTAVTRPPEEEGVGVTVEEARKVARAAEMEVA 123
Query: 322 RLKEKYCVCHLSTGDMLRA---EVSSGSDLGRRLKKVMDEGKLV 444
R + + + +G A +++ G++ GRRL + +D+ +V
Sbjct: 124 RARLRSNAQSVVSGSEFAALCVDIAGGAEGGRRLARALDDSGVV 167
>03_02_0147 -
5923117-5923215,5923882-5924069,5924885-5924977,
5925499-5925628,5925720-5925802,5925893-5925976,
5926253-5926316,5926375-5926515,5926801-5926863,
5926968-5927006,5927126-5927185,5927567-5927624,
5927708-5928099
Length = 497
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 376 HAACHQWIGDKHNTFLSDEEPE 311
HA QWI +K+NTF+S + E
Sbjct: 448 HAEARQWIDEKYNTFISKLQVE 469
>07_03_1713 +
28939446-28939574,28939674-28940231,28940338-28940460,
28940676-28940912
Length = 348
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 250 DEDPLGIRAVLLGPPGSGKGTQAPR 324
DE G R +GPPG+G G + PR
Sbjct: 166 DEPGYGYRPPPVGPPGAGYGNRLPR 190
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 28.3 bits (60), Expect = 5.4
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 PLGIRAVLLGPPGSGKGTQAPRL-KEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEG 435
P GI +L GPPGSGK A + E L G + ++++ S+ L+K +E
Sbjct: 244 PKGI--LLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESE--SNLRKAFEEA 299
Query: 436 KLVSDEMV-VDMIDKNLDQPECKNG 507
+ + ++ +D ID + E NG
Sbjct: 300 EKNAPSIIFIDEIDSIAPKREKTNG 324
>06_01_1161 - 9872947-9873800,9874187-9874331,9874628-9874681
Length = 350
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 256 DPLGIRAVLLGPP--GSGKGTQAPRLKEKYCVCHLST 360
+P + AV+L GSG G+ P E VCHL T
Sbjct: 263 NPTRVYAVVLESEEDGSGSGSGTPEKMEALAVCHLDT 299
>05_07_0306 - 29108860-29109282,29109425-29110441
Length = 479
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +1
Query: 277 VLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEM 456
+L GPPG+GK + + D+ EV S SDL R L + + LV +++
Sbjct: 254 LLYGPPGTGKSSLIAAMAN---YLKFDIYDLELTEVKSNSDLRRLLVGMSNRSILVVEDI 310
Query: 457 VVDMIDKNLDQPECK 501
+ + D+ E K
Sbjct: 311 DCTIDLQQRDEGEIK 325
>05_06_0101 -
25581800-25581943,25582030-25582095,25582268-25582390,
25582635-25582722,25582823-25582920,25583088-25583147,
25583228-25583288,25583374-25583505,25583957-25584167,
25584515-25584648,25584907-25584989,25585077-25585142,
25585552-25585607,25585701-25585800,25586313-25586421,
25586499-25586653,25586767-25586937,25587129-25587212,
25587261-25587345,25587431-25587477,25587912-25588124
Length = 761
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Frame = +1
Query: 160 FDLSVQGSN*LKA*EFDDMAPAAAATKLKPDE--DPLGIRAV----LLGPPGSGKGTQAP 321
F+L G L A EF D+ A A+++ P + LGI+ V L GPPG+GK A
Sbjct: 218 FNLEKLGIGGLSA-EFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMAR 276
Query: 322 RL 327
++
Sbjct: 277 QI 278
>03_05_0384 -
23671097-23671201,23671343-23671429,23671542-23671660,
23671839-23672077,23672473-23672529,23672634-23672720,
23673147-23673688,23676494-23676691
Length = 477
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 35 LILSVFIFI*STCFELNMYGFDLFSPYNFFVMDFVSLCL-SAISICL 172
+IL+ FI++ S CF GF + + N + FV L L SAI +CL
Sbjct: 204 IILAQFIYLVSGCFPEAWKGFSMLAFKN--LAAFVKLSLASAIMLCL 248
>04_04_1659 -
35127145-35127204,35127324-35127464,35127597-35127647,
35127757-35127837,35128229-35128324,35128393-35128568,
35130088-35130176,35130255-35130362,35130673-35130809,
35131023-35131073,35131264-35131310,35131477-35131544,
35132161-35132262,35132556-35132735,35132821-35133059
Length = 541
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 457 VVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLDDLLAK 573
V ++I ++D+P+ NGF LD F E+ D LL K
Sbjct: 182 VHEIIFSSIDKPKLLNGFCLDVFVVDGWDTEETDGLLQK 220
>03_06_0407 -
33714563-33714636,33714966-33715152,33715943-33716093,
33716520-33716632,33717022-33717085,33717180-33717391,
33717540-33717621,33717811-33717866,33718004-33718072,
33718524-33718772,33718873-33719049,33719556-33719702,
33719794-33719926,33720093-33720307
Length = 642
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 214 MAPAAAATKLKPDEDPLGIRAVLLGPPGSGKGT 312
MA AA A L + G+R V++G PG+GK +
Sbjct: 1 MAAAATAANLAGKQ---GVRVVVIGDPGTGKSS 30
>08_02_0037 + 11480213-11481013,11483612-11483707
Length = 298
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 258 SFRNKGRATWPSWI-R*GDSGSSSERKVL 341
SF+N+ WP W+ R + G+++E K L
Sbjct: 14 SFQNRRLVRWPEWVPRPDEKGAAAEEKKL 42
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 277 VLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLR 375
++ G PG+GK T L + + H++ GD++R
Sbjct: 16 LVTGTPGTGKTTTCSLLADAVDLRHINIGDLVR 48
>03_05_0461 + 24549079-24550464
Length = 461
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 617 SSIPNSITASSAVLRFANRSSNFSAWGTVLGNPSSKKPFLH 495
+S P+S +SS+ RSS FS P+S P H
Sbjct: 39 ASTPSSSVSSSSTASVGGRSSTFSLDSAATATPTSSPPRPH 79
>02_02_0191 +
7642942-7642944,7643405-7643513,7643578-7643886,
7644697-7644839
Length = 187
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 377 LKSHRDQTWDDALRRSWMRANLFPMKWWLI*LTRTWINL 493
LK R++T L ++ RAN P KWWL R ++N+
Sbjct: 147 LKQIREETSGRLLNCAY-RANGTPNKWWLAFAKRKFMNI 184
>01_02_0096 - 11081051-11081101,11081235-11081537
Length = 117
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 214 MAPAAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKE 333
+AP AA K K D+ PLG R + LG +G+G+ + L E
Sbjct: 30 VAPHAARAKGKKDKRPLGRRLLELG-DAAGEGSVSRVLDE 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,013,593
Number of Sequences: 37544
Number of extensions: 376504
Number of successful extensions: 1136
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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