Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10m19
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical p... 180 8e-46
Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical pr... 89 3e-18
AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kin... 89 3e-18
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1 prot... 29 2.8
X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein. 29 2.8
AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical... 29 2.8
Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical pr... 29 3.7
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 28 6.4
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 28 6.4
>L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical
protein C29E4.8 protein.
Length = 251
Score = 180 bits (438), Expect = 8e-46
Identities = 81/123 (65%), Positives = 100/123 (81%)
Frame = +1
Query: 265 GIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLV 444
GIRA+ +GPPGSGKGTQAP +KY CHL+TGD+LRAEV+SGS+ G+ LK MD GKLV
Sbjct: 26 GIRAIFIGPPGSGKGTQAPAFAQKYFSCHLATGDLLRAEVASGSEFGKELKATMDAGKLV 85
Query: 445 SDEMVVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIEDSL 624
SDE+V +I++ L++PECK GF+LDGFPRT QAEKLD++L +RKT LD V+EF I D L
Sbjct: 86 SDEVVCKLIEQKLEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDL 145
Query: 625 LVR 633
LVR
Sbjct: 146 LVR 148
>Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical
protein F38B2.4 protein.
Length = 210
Score = 88.6 bits (210), Expect = 3e-18
Identities = 43/105 (40%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Frame = +1
Query: 280 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMV 459
++G PGSGKGTQ ++ KY + HLS+GD+LR EV SGS G +L +M+ G LV E+V
Sbjct: 25 IVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIMESGALVPLEVV 84
Query: 460 VDMIDKNLDQ--PECKNGFLLDGFPRTVPQAEKLDDLLAKRKTAL 588
+D++ + + + + GFL+DG+PR V Q ++ + + + K L
Sbjct: 85 LDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQEAKLVL 129
>AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kinase
1 protein.
Length = 210
Score = 88.6 bits (210), Expect = 3e-18
Identities = 43/105 (40%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Frame = +1
Query: 280 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMV 459
++G PGSGKGTQ ++ KY + HLS+GD+LR EV SGS G +L +M+ G LV E+V
Sbjct: 25 IVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIMESGALVPLEVV 84
Query: 460 VDMIDKNLDQ--PECKNGFLLDGFPRTVPQAEKLDDLLAKRKTAL 588
+D++ + + + + GFL+DG+PR V Q ++ + + + K L
Sbjct: 85 LDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQEAKLVL 129
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 280 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAE-VSSGSDLGRRLKKVMDEGKLVSDEM 456
+LGPPGSGKGT ++ E HLS GD+LRAE +GS+ G ++ + G +V E+
Sbjct: 7 VLGPPGSGKGTICTQIHENLGYVHLSAGDLLRAERERAGSEYGALIEGHIKNGSIVPVEI 66
Query: 457 VVDMIDKNLDQPECKNGFLLDGFPR 531
+++ + + NGFL+DGFPR
Sbjct: 67 TCALLENAMIASKDANGFLIDGFPR 91
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 280 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAE-VSSGSDLGRRLKKVMDEGKLVSDEM 456
+LGPPGSGKGT +++E HLS GD+LRAE GS+ G ++ + G +V E+
Sbjct: 7 VLGPPGSGKGTICAKIQENLNYVHLSAGDLLRAERQREGSEFGALIESHIKNGSIVPVEI 66
Query: 457 VVDMIDKNLDQPECKNGFLLDGFPR 531
+++ + GFL+DGFPR
Sbjct: 67 TCSLLENAMKACGDAKGFLVDGFPR 91
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Frame = +1
Query: 277 VLLGPPGSGKGTQAPRLKEKY-CVCHLSTGDMLRAEVSS--GSDLGRRLKKVMDEGKLVS 447
++LG PGS K + R+ +KY LS GD+LR ++++ ++ ++ K M+ G +
Sbjct: 517 LVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDPIP 576
Query: 448 DEMVVDMIDKNLDQPECKN-GFLLDGFPRTVPQAEKLDDLLAKRKTA--LDAVIEFGIE 615
+M ++ + L N G++++G+P++ Q L+ L + A +D +F +E
Sbjct: 577 TKMCRTVLYEELHSRGTSNWGYVIEGYPKSPDQLVDLEHSLQRTDLAILIDCTEQFCLE 635
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Frame = +1
Query: 277 VLLGPPGSGKGTQAPRLKEKYC---VCHLSTGDMLRAEVSSGSDLGRRLKKVMDE---GK 438
+ +G PG GK A R+ + + H+ D++R + D K+ + G+
Sbjct: 173 LFMGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEWKEANEHYIRGE 232
Query: 439 LVSDEMVVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLD 558
L+ +++ + ++ + + GF L+G+PR Q E +
Sbjct: 233 LIPNQLALTLLKAEMGRHPDAMGFFLEGYPREARQVEDFE 272
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Frame = +1
Query: 277 VLLGPPGSGKGTQAPRLKEKY-CVCHLSTGDMLRAEVSS--GSDLGRRLKKVMDEGKLVS 447
++LG PGS K + R+ +KY LS GD+LR ++++ ++ ++ K M+ G +
Sbjct: 517 LVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDPIP 576
Query: 448 DEMVVDMIDKNLDQPECKN-GFLLDGFPRTVPQAEKLDDLLAKRKTA--LDAVIEFGIE 615
+M ++ + L N G++++G+P++ Q L+ L + A +D +F +E
Sbjct: 577 TKMCRTVLYEELHSRGTSNWGYVIEGYPKSPDQLVDLEHSLQRTDLAILIDCTEQFCLE 635
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Frame = +1
Query: 277 VLLGPPGSGKGTQAPRLKEKYC---VCHLSTGDMLRAEVSSGSDLGRRLKKVMDE---GK 438
+ +G PG GK A R+ + + H+ D++R + D K+ + G+
Sbjct: 173 LFMGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEWKEANEHYIRGE 232
Query: 439 LVSDEMVVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLD 558
L+ +++ + ++ + + GF L+G+PR Q E +
Sbjct: 233 LIPNQLALTLLKAEMGRHPDAMGFFLEGYPREARQVEDFE 272
>Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical
protein ZK673.2 protein.
Length = 222
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/123 (24%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Frame = +1
Query: 271 RAVLLGPPGSGKGTQAPRLKEKY---CVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKL 441
R +L G GSGKGT A L ++ + + GD +R ++ G++ G R + +++G+
Sbjct: 3 RVLLSGAAGSGKGTIARMLVREFEPLGFNYFAAGDFIRDHIARGTEFGVRAQSFLNKGEH 62
Query: 442 VSDEMVVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIEDS 621
V D ++ I + + +LDG+PR + Q + +++ + L+ ++E +
Sbjct: 63 VPDSILNGAI--LAEMLKAGPRVVLDGYPRNMSQLKMVEE-----QAPLNLIVELKVPRK 115
Query: 622 LLV 630
+L+
Sbjct: 116 VLI 118
>Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1
protein.
Length = 497
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 265 LKDPHQVLVSWLQRPVPYHQIL 200
LKDP+ + WL RP HQ++
Sbjct: 172 LKDPNMIFDFWLHRPEALHQVM 193
>X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 265 LKDPHQVLVSWLQRPVPYHQIL 200
LKDP+ + WL RP HQ++
Sbjct: 172 LKDPNMIFDFWLHRPEALHQVM 193
>AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical
protein Y54G11A.5 protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 265 LKDPHQVLVSWLQRPVPYHQIL 200
LKDP+ + WL RP HQ++
Sbjct: 172 LKDPNMIFDFWLHRPEALHQVM 193
>Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical
protein C29F3.6 protein.
Length = 278
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 5 VLFKFEMSSNLILSVFIFI*STCFELNMYGFDLF 106
VL + +++LIL I S CFE+ YG DLF
Sbjct: 145 VLCRIRFNADLILFTIILAPSYCFEIGRYG-DLF 177
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 406 RRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKNG 507
+RLKK M +G+ +DE +VD + + L+ +G
Sbjct: 673 KRLKKQMGKGRSQADERIVDEMAEKLELKRSSDG 706
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 406 RRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKNG 507
+RLKK M +G+ +DE +VD + + L+ +G
Sbjct: 673 KRLKKQMGKGRSQADERIVDEMAEKLELKRSSDG 706
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,345,890
Number of Sequences: 27780
Number of extensions: 308232
Number of successful extensions: 1024
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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