Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10m19
         (633 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   3.3  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    23   3.3  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   5.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   5.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   7.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   7.5  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   9.9  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 624 QTVLDSELDYGVQCSLAL 571
           Q +LD  LDY + C L++
Sbjct: 56  QFILDVRLDYRISCLLSI 73


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 624 QTVLDSELDYGVQCSLAL 571
           Q +LD  LDY + C L++
Sbjct: 24  QFILDVRLDYRISCLLSI 41


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 110 PYNFFVMDFVSLCLSAISICLY 175
           P  F V+ ++  C SAI+ C+Y
Sbjct: 41  PTVFSVLFWLGYCNSAINPCIY 62


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 110 PYNFFVMDFVSLCLSAISICLY 175
           P  F V+ ++  C SAI+ C+Y
Sbjct: 489 PTVFSVLFWLGYCNSAINPCIY 510


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -1

Query: 234 GCSGRCHIIKFLSLQLIRALYRQIEIADRQRETKSI 127
           G    CH        L   LY+Q+E+    R  +SI
Sbjct: 312 GALNDCHAEVVARRCLCEYLYKQLELHTEDRAAESI 347


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 401 WDDALRRSWMRAN 439
           WD AL   W+R N
Sbjct: 224 WDQALALRWLRDN 236


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 401 WDDALRRSWMRAN 439
           WD AL   W+R N
Sbjct: 224 WDQALALRWLRDN 236


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 336 VLCLSPIHW 362
           +LC+S +HW
Sbjct: 295 ILCMSDLHW 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,064
Number of Sequences: 438
Number of extensions: 3683
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)