Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10m03
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81459-1|CAB03827.3| 731|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z79604-6|CAB97241.2| 731|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical pr... 33 0.24
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 31 0.75
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 31 0.99
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 2.3
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 2.3
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 3.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.0
AL110485-16|CAB60364.1| 295|Caenorhabditis elegans Hypothetical... 29 3.0
Z74028-6|CAI91174.1| 674|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z74028-5|CAA98427.1| 677|Caenorhabditis elegans Hypothetical pr... 29 4.0
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 29 4.0
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 28 5.3
U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein. 28 5.3
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 28 5.3
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 28 6.9
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 27 9.2
U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin fam... 27 9.2
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical... 27 9.2
>Z81459-1|CAB03827.3| 731|Caenorhabditis elegans Hypothetical
protein C03H12.1 protein.
Length = 731
Score = 37.5 bits (83), Expect = 0.009
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Frame = +1
Query: 331 MVFCVTLALTTYG-ALHNTSTKVSKHPQAYKFFGPE-SVVTDWYKGELSSAINKVNNVDV 504
+ + L LT G ++ + VSK F G ++ D Y G I N +
Sbjct: 92 LAIMIYLLLTLLGLSMPSRPLVVSKGAAKPFFHGVHRKLIQDNYDG----TIRLSGNQTM 147
Query: 505 SFVMYYAPWDAESQYVRGEFEKTAMVLKD-----RVHFAAINCWNPGSECRLLHN 654
S ++ Y+P+ S++ R E+ TA LK +F A NC++ S CR +N
Sbjct: 148 SVILLYSPYSIRSKWFREEYYTTARRLKKLHGNLAPYFGATNCFDQNSYCRRKYN 202
>Z79604-6|CAB97241.2| 731|Caenorhabditis elegans Hypothetical
protein C03H12.1 protein.
Length = 731
Score = 37.5 bits (83), Expect = 0.009
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Frame = +1
Query: 331 MVFCVTLALTTYG-ALHNTSTKVSKHPQAYKFFGPE-SVVTDWYKGELSSAINKVNNVDV 504
+ + L LT G ++ + VSK F G ++ D Y G I N +
Sbjct: 92 LAIMIYLLLTLLGLSMPSRPLVVSKGAAKPFFHGVHRKLIQDNYDG----TIRLSGNQTM 147
Query: 505 SFVMYYAPWDAESQYVRGEFEKTAMVLKD-----RVHFAAINCWNPGSECRLLHN 654
S ++ Y+P+ S++ R E+ TA LK +F A NC++ S CR +N
Sbjct: 148 SVILLYSPYSIRSKWFREEYYTTARRLKKLHGNLAPYFGATNCFDQNSYCRRKYN 202
>Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical
protein R06A4.4a protein.
Length = 883
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 220 LSEKHSTDSDAQNSSENSQVSLQQNNRELTLNMLL----KEMVFCVTLALTTYGALHNTS 387
L HSTD D Q + + V L ++ + + + KEM+ + +L +N
Sbjct: 17 LQHAHSTDRDVQRNVQVQLVQLNEHQKFCCYLVYILSDMKEMIDATSRSLAGLLLKNNIR 76
Query: 388 TKVSKHPQAYKFF 426
K +K+PQ KFF
Sbjct: 77 AKWNKYPQDVKFF 89
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 31.1 bits (67), Expect = 0.75
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -2
Query: 341 QNTISLSNIFN-VNSLLFCCNETCEFSEEFCASLSVLCFSDSDVTCVISSVFAVGNITRH 165
+N+ S SN+ N ++ + FCC+ FS AS + S TC+ S+ F+ H
Sbjct: 467 ENSESFSNLTNAIDVMFFCCHTVSIFSCPDGASPFLDPNSGQPATCLASNPFSCP--AEH 524
Query: 164 SITNLRDTITNKMP 123
S T L D T P
Sbjct: 525 SCTALMDGSTACCP 538
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 487 VNNVDVSFVMYYAPWDAESQYVRGEFEKTAMVLKDRVHFAAIN 615
+N+ D+ V +YAPW + + E++K A LK A++
Sbjct: 39 INSDDIWIVEFYAPWCGHCKSLVPEYKKAASALKGVAKVGAVD 81
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 487 VNNVDVSFVMYYAPWDAESQYVRGEFEKTAMVLK 588
++N ++ V +YAPW + + E+EK A LK
Sbjct: 161 ISNNELVLVEFYAPWCGHCKKLAPEYEKAAQKLK 194
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 2.3
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = -2
Query: 422 NLYACGCLDTFVDVLCKA---P*VVSARVTQNTISLSNIFNVNSLLFCCNETCEF-SEEF 255
++ A GC+ V ++C+ VS + N +N NVN F CN ++ S F
Sbjct: 1775 SINAFGCMT--VSMMCEGVLPSDPVSIVINGNYAEYAN-GNVNYTDFACNSQGQWTSSTF 1831
Query: 254 CASLSVLCFSDSDVTCVISSVFAVGNITRHSITNLRDTITNKMPR 120
SV+C SD T ++++ A T + + N T N +PR
Sbjct: 1832 GVVTSVICQRRSD-TVIVTTALATTTTTSNGLCN---TCPNIVPR 1872
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 2.3
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = -2
Query: 422 NLYACGCLDTFVDVLCKA---P*VVSARVTQNTISLSNIFNVNSLLFCCNETCEF-SEEF 255
++ A GC+ V ++C+ VS + N +N NVN F CN ++ S F
Sbjct: 1775 SINAFGCMT--VSMMCEGVLPSDPVSIVINGNYAEYAN-GNVNYTDFACNSQGQWTSSTF 1831
Query: 254 CASLSVLCFSDSDVTCVISSVFAVGNITRHSITNLRDTITNKMPR 120
SV+C SD T ++++ A T + + N T N +PR
Sbjct: 1832 GVVTSVICQRRSD-TVIVTTALATTTTTSNGLCN---TCPNIVPR 1872
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 2.3
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = -2
Query: 422 NLYACGCLDTFVDVLCKA---P*VVSARVTQNTISLSNIFNVNSLLFCCNETCEF-SEEF 255
++ A GC+ V ++C+ VS + N +N NVN F CN ++ S F
Sbjct: 1775 SINAFGCMT--VSMMCEGVLPSDPVSIVINGNYAEYAN-GNVNYTDFACNSQGQWTSSTF 1831
Query: 254 CASLSVLCFSDSDVTCVISSVFAVGNITRHSITNLRDTITNKMPR 120
SV+C SD T ++++ A T + + N T N +PR
Sbjct: 1832 GVVTSVICQRRSD-TVIVTTALATTTTTSNGLCN---TCPNIVPR 1872
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 2.3
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = -2
Query: 422 NLYACGCLDTFVDVLCKA---P*VVSARVTQNTISLSNIFNVNSLLFCCNETCEF-SEEF 255
++ A GC+ V ++C+ VS + N +N NVN F CN ++ S F
Sbjct: 1775 SINAFGCMT--VSMMCEGVLPSDPVSIVINGNYAEYAN-GNVNYTDFACNSQGQWTSSTF 1831
Query: 254 CASLSVLCFSDSDVTCVISSVFAVGNITRHSITNLRDTITNKMPR 120
SV+C SD T ++++ A T + + N T N +PR
Sbjct: 1832 GVVTSVICQRRSD-TVIVTTALATTTTTSNGLCN---TCPNIVPR 1872
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 175 MFPT-ANTEDITQVTSLSEKHSTDSDA-QNSSENSQVSLQQNNRELTLNMLL 324
+FP+ +T+++ Q +L +KH +D D EN + S+ + E T++ +
Sbjct: 8690 VFPSDGDTQEVEQKVTLPKKHQSDEDVISKEEENLETSVSYGSIEETVSFTI 8741
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 175 MFPT-ANTEDITQVTSLSEKHSTDSDA-QNSSENSQVSLQQNNRELTLNMLL 324
+FP+ +T+++ Q +L +KH +D D EN + S+ + E T++ +
Sbjct: 8710 VFPSDGDTQEVEQKVTLPKKHQSDEDVISKEEENLETSVSYGSIEETVSFTI 8761
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 175 MFPT-ANTEDITQVTSLSEKHSTDSDA-QNSSENSQVSLQQNNRELTLNMLL 324
+FP+ +T+++ Q +L +KH +D D EN + S+ + E T++ +
Sbjct: 8710 VFPSDGDTQEVEQKVTLPKKHQSDEDVISKEEENLETSVSYGSIEETVSFTI 8761
>AL110485-16|CAB60364.1| 295|Caenorhabditis elegans Hypothetical
protein Y46G5A.22a protein.
Length = 295
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -2
Query: 347 VTQNTISLSNIFN-VNSLLFCCNETCEFSEEFCASLSVLCFSDSDVTC 207
V Q +S++N+F +++++F CEF+ +C S ++C DVTC
Sbjct: 234 VEQFFMSIANMFTRMDAIIFA--SYCEFAARYCRSRRLMC----DVTC 275
>Z74028-6|CAI91174.1| 674|Caenorhabditis elegans Hypothetical
protein C14C10.3b protein.
Length = 674
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 430 PESVVTDWYKGELSSAINKVNNVDVSFV 513
PE+ + W +GEL S +++++ + SFV
Sbjct: 248 PETYTSQWKEGELPSISSQISSTETSFV 275
>Z74028-5|CAA98427.1| 677|Caenorhabditis elegans Hypothetical
protein C14C10.3a protein.
Length = 677
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 430 PESVVTDWYKGELSSAINKVNNVDVSFV 513
PE+ + W +GEL S +++++ + SFV
Sbjct: 248 PETYTSQWKEGELPSISSQISSTETSFV 275
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 181 PTANTEDIT-QVTSLSEKHSTDSDAQNSSENSQVSLQQNN 297
PT T T + T+ EKHST +A + S+N S+ N
Sbjct: 162 PTTTTPTTTLKPTTSPEKHSTTEEATSPSQNETTSVTTQN 201
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 499 DVSFVMYYAPWDAESQYVRGEFEKTAMVLKDR---VHFAAINCWNPGSEC 639
D++ V +YAPW + + E+E+ A L V ++C + C
Sbjct: 38 DIALVKFYAPWCGHCKKIAPEYERAAPKLASNDPPVALVKVDCTTEKTVC 87
>U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein.
Length = 846
Score = 28.3 bits (60), Expect = 5.3
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Frame = +1
Query: 286 QQNNREL--TLNMLLKEMVFCVTLALTTYGALHNTSTKVSKHPQAYKFFGPESVVTDWYK 459
++NN +L +L ML+++ F + ++L T A + K +A SVV +K
Sbjct: 398 EKNNDQLHNSLEMLIEQSSFPLVVSLFTSEA--TGAVKTGGRLKAV------SVVAK-FK 448
Query: 460 GELSSAINKVNNVDVSFVMYYAPWDAESQYVRGEFEKTAMVLKDRVHFAAINCWNPGSEC 639
+LSS ++K+NN FV P SQ F+ +A++ + C S
Sbjct: 449 SQLSSLLDKLNNTGTHFVRCVKP---NSQMKAWHFDGSAIL-------GQLQCAGMASVL 498
Query: 640 RLLHNKIPS 666
RL+ PS
Sbjct: 499 RLMQEGFPS 507
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 499 DVSFVMYYAPWDAESQYVRGEFEKTAMVLKDR---VHFAAINCWNPGSEC 639
D++ V +YAPW + + E+E+ A L V ++C + C
Sbjct: 38 DIALVKFYAPWCGHCKKIAPEYERAAPKLASNDPPVALVKVDCTTEKTVC 87
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/75 (21%), Positives = 29/75 (38%)
Frame = -2
Query: 455 YQSVTTDSGPKNLYACGCLDTFVDVLCKAP*VVSARVTQNTISLSNIFNVNSLLFCCNET 276
Y +D G Y+C CL+ ++D C+ +N + +N+ F C T
Sbjct: 374 YGGTCSDLG-NGSYSCACLNLYMDTNCETFDSCYINKCENGGTCVPTYNLLDSTFTCQCT 432
Query: 275 CEFSEEFCASLSVLC 231
++ +C C
Sbjct: 433 PDWKGTYCEEERYYC 447
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +1
Query: 202 ITQVTSLSEKHSTDSDAQNSSENSQVSLQQNNRELTLNMLLK 327
+ V++ + K ++D+D ++ S +S ++ NN+ELTL L K
Sbjct: 101 LPSVSTETAKKASDADRESKSRSSLKRIE-NNQELTLKTLEK 141
>U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin family
protein 16 protein.
Length = 361
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 323 SKRWYSASPLRL--LLMELCIIHLQKCPSTHRHINSLDQSXXXXTGTKGS*AVPLT 484
SK ++ LRL LL + +L PS HRHI S ++ G + S +PLT
Sbjct: 12 SKYFWQCVCLRLCVLLGSVTFQYLFVFPSAHRHIESFEREKEGPRGNE-SDRIPLT 66
>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
protein T05H4.3 protein.
Length = 1152
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 322 LKEMVFCVTLALTTYGALHNTSTK----VSKHPQAYKFFGPESVVTDWYKGELSSAINKV 489
L+ +VFC +L T + LH K V Q FF ++++ D EL + K+
Sbjct: 705 LQTLVFCQSLGNTRHLLLHRNQIKSMKGVESCVQLETFFVNDNLLKDKSDVELLKTMPKL 764
Query: 490 NNVDVS 507
++D+S
Sbjct: 765 THLDMS 770
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,527,599
Number of Sequences: 27780
Number of extensions: 318096
Number of successful extensions: 897
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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