Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10l22
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024499-6|AAB70354.1|  560|Caenorhabditis elegans Hypothetical ...    30   1.4  
L10986-9|AAK93847.2|  808|Caenorhabditis elegans Spindle assembl...    29   3.1  
AJ539470-1|CAD62434.1|  808|Caenorhabditis elegans SAS-4 protein...    29   3.1  
Z81530-8|CAB04305.2|  329|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z83234-4|CAB70168.1|  367|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z74034-3|CAF31476.1|  322|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical p...    27   9.5  
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p...    27   9.5  
AF003130-8|AAB54130.2|  611|Caenorhabditis elegans Pip kinase pr...    27   9.5  
AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical ...    27   9.5  

>AF024499-6|AAB70354.1|  560|Caenorhabditis elegans Hypothetical
           protein F42G2.2 protein.
          Length = 560

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
 Frame = +2

Query: 269 QKTSYLKSALL--PPVRALREQ-VQTFVDQTDFIKHSIQDNYHEFQDKSE-----WIFKY 424
           Q   YLK ALL  P  R  + Q V + +++T F     +  +   +D S      W F Y
Sbjct: 472 QDVVYLKDALLLSPTFRQFKAQFVNSDINETIFDDAFFRYPFRRIEDPSSGLPNIWFFPY 531

Query: 425 LREEENKEVRY 457
              EE+ ++RY
Sbjct: 532 TDVEEDLQIRY 542


>L10986-9|AAK93847.2|  808|Caenorhabditis elegans Spindle assembly
           abnormal protein 4 protein.
          Length = 808

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
 Frame = +2

Query: 89  KVVMSSMGAIALVPVIKAAAPINEESNGPAKPPPMRVSELPLYETPHADYAEYLEAKAHE 268
           KV M+   +  + PV+  + PI+  SNGP++ P    S L  +  P     E   + A E
Sbjct: 505 KVAMNRKTSNPVPPVLNQSVPISITSNGPSRHPSS--SSLTTFRKPSTSNRERGVSWADE 562

Query: 269 QKTSYLKSA----LLPPVRAL 319
                L++     L+ PV+ +
Sbjct: 563 PNEQSLEAVPQEFLMMPVKEM 583


>AJ539470-1|CAD62434.1|  808|Caenorhabditis elegans SAS-4 protein
           protein.
          Length = 808

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
 Frame = +2

Query: 89  KVVMSSMGAIALVPVIKAAAPINEESNGPAKPPPMRVSELPLYETPHADYAEYLEAKAHE 268
           KV M+   +  + PV+  + PI+  SNGP++ P    S L  +  P     E   + A E
Sbjct: 505 KVAMNRKTSNPVPPVLNQSVPISITSNGPSRHPSS--SSLTTFRKPSTSNRERGVSWADE 562

Query: 269 QKTSYLKSA----LLPPVRAL 319
                L++     L+ PV+ +
Sbjct: 563 PNEQSLEAVPQEFLMMPVKEM 583


>Z81530-8|CAB04305.2|  329|Caenorhabditis elegans Hypothetical
           protein F36D1.3 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = -1

Query: 493 YEACETTHCNSSISYFFIFFLAQILKDPF*LILEFVVVIL--NGVFDEIC 350
           ++A +TT  +S   + F+ FL   + + F +I +F+VV +   G+   IC
Sbjct: 48  FDANQTTMASSIQKHLFMAFLFMQIANFFYIITDFIVVRIPATGILTSIC 97


>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical protein
            T11G6.5 protein.
          Length = 1406

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = -2

Query: 525  ILLINPPLSPNMKPVRPPIATAPYLTSLFSSSRKY 421
            +++++PP  P+ K ++PP+A  P +++L      Y
Sbjct: 1134 VIILSPPPHPSQKKIQPPVA-PPGISNLNRPGNNY 1167


>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
            protein T11G6.5 protein.
          Length = 1406

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = -2

Query: 525  ILLINPPLSPNMKPVRPPIATAPYLTSLFSSSRKY 421
            +++++PP  P+ K ++PP+A  P +++L      Y
Sbjct: 1134 VIILSPPPHPSQKKIQPPVA-PPGISNLNRPGNNY 1167


>Z83234-4|CAB70168.1|  367|Caenorhabditis elegans Hypothetical
           protein K09E4.1 protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 152 INEESNGPAKPPPMRVSELPLYETPHADY 238
           + +E+ GPA PPP    +  L+E  + +Y
Sbjct: 10  LEQEAIGPALPPPSAAQKSELFEEHNVEY 38


>Z74034-3|CAF31476.1|  322|Caenorhabditis elegans Hypothetical
           protein F43A11.6 protein.
          Length = 322

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
 Frame = -1

Query: 418 KDPF*LILEFVVVILNGVFDEIC---LIYKCLHLFS*STYWR**C*FKV---TCLLLMGF 257
           KDP  L+   +++I+NG+F  +C   ++Y  +++    T +   C F+    T +LL GF
Sbjct: 15  KDPLNLLAS-IIMIVNGIFGSVCNLSIVYIFMYVPKEKTSFNLICVFRSLGNTIILLWGF 73


>Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical
           protein F14F8.13 protein.
          Length = 328

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -1

Query: 454 SYFFIFFLAQILKDPF*LILEFVVVILNGV 365
           S+F IF++  +L+  F +IL F++ ILN +
Sbjct: 105 SFFIIFYILHVLQQTFHVIL-FLLAILNSL 133


>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
            protein C52B9.8 protein.
          Length = 1336

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +2

Query: 155  NEESNGPAKPPPMRVSELPLYETPHADYAEYLEAKAHEQKTSYLKSALLPPVRALREQVQ 334
            NE++   AKP  +   E+P      AD  +Y+E    E +  YL+  ++P  R  R +V 
Sbjct: 896  NEQAQ-KAKPRLVGEDEIPRDILRAADETDYIEKAKEEGRVPYLE--VMPGSRRTRREVD 952

Query: 335  TFVD 346
               D
Sbjct: 953  YSAD 956


>AF003130-8|AAB54130.2|  611|Caenorhabditis elegans Pip kinase
           protein 1 protein.
          Length = 611

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +2

Query: 152 INEESNGPAKPPPMRVSELPLYETPHADYAEYLEAKAHEQKTSYLKSALLPPVRALREQ 328
           INE+    A+ PP  +S +PL  + + D  + + A   E+K   L +   P    + E+
Sbjct: 539 INEDRANSAREPPSSMSRVPLRRS-YRDAGQAMSADKKEKKVERLFAQSKPTDEKVPEE 596


>AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.1 protein.
          Length = 506

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 564 TSPIAVVPAPAYIILLINPPLSPNMKPVRPPIATAP 457
           +S + + PAP+ +I  + PP  P   P +PP + AP
Sbjct: 250 SSTVPLPPAPSSLIQNLPPPPQPAFLP-QPPTSYAP 284


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,501,629
Number of Sequences: 27780
Number of extensions: 283646
Number of successful extensions: 978
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)